A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
| A3 | Accurate, Adaptable, and Accessible Error Metrics for Predictive Models |
| aaSEA | Amino Acid Substitution Effect Analyser |
| AATtools | Reliability and Scoring Routines for the Approach-Avoidance Task |
| ABACUS | Apps Based Activities for Communicating and Understanding Statistics |
| abbyyR | Access to Abbyy Optical Character Recognition (OCR) API |
| abc | Tools for Approximate Bayesian Computation (ABC) |
| abc.data | Data Only: Tools for Approximate Bayesian Computation (ABC) |
| ABC.RAP | Array Based CpG Region Analysis Pipeline |
| abcADM | Fit Accumulated Damage Models and Estimate Reliability using ABC |
| ABCanalysis | Computed ABC Analysis |
| abcdeFBA | ABCDE_FBA: A-Biologist-Can-Do-Everything of Flux Balance Analysis with this package |
| ABCoptim | Implementation of Artificial Bee Colony (ABC) Optimization |
| ABCp2 | Approximate Bayesian Computational Model for Estimating P2 |
| abcrf | Approximate Bayesian Computation via Random Forests |
| abcrlda | Asymptotically Bias-Corrected Regularized Linear Discriminant Analysis |
| abctools | Tools for ABC Analyses |
| abd | The Analysis of Biological Data |
| abdiv | Alpha and Beta Diversity Measures |
| abe | Augmented Backward Elimination |
| abf2 | Load Gap-Free Axon ABF2 Files |
| ABHgenotypeR | Easy Visualization of ABH Genotypes |
| abind | Combine Multidimensional Arrays |
| abjutils | Useful Tools for Jurimetrical Analysis Used by the Brazilian Jurimetrics Association |
| abnormality | Measure a Subject's Abnormality with Respect to a Reference Population |
| abodOutlier | Angle-Based Outlier Detection |
| ABPS | The Abnormal Blood Profile Score to Detect Blood Doping |
| AbSim | Time Resolved Simulations of Antibody Repertoires |
| abstractr | An R-Shiny Application for Creating Visual Abstracts |
| abtest | Bayesian A/B Testing |
| Ac3net | Inferring Directional Conservative Causal Core Gene Networks |
| ACA | Abrupt Change-Point or Aberration Detection in Point Series |
| acc | Exploring Accelerometer Data |
| accelerometry | Functions for Processing Accelerometer Data |
| accelmissing | Missing Value Imputation for Accelerometer Data |
| accept | The Acute COPD Exacerbation Prediction Tool (ACCEPT) |
| AcceptanceSampling | Creation and Evaluation of Acceptance Sampling Plans |
| accrual | Bayesian Accrual Prediction |
| accSDA | Accelerated Sparse Discriminant Analysis |
| ACD | Categorical data analysis with complete or missing responses |
| ACDm | Tools for Autoregressive Conditional Duration Models |
| ace2fastq | ACE File to FASTQ Converter |
| acebayes | Optimal Bayesian Experimental Design using the ACE Algorithm |
| aceEditor | The 'Ace' Editor as a HTML Widget |
| acepack | ACE and AVAS for Selecting Multiple Regression Transformations |
| ACEsearch | 'ACE' Search Engine API |
| ACEt | Estimation of Dynamic Heritability and Comparison of Twin Models |
| acfMPeriod | Robust Estimation of the ACF from the M-Periodogram |
| acid | Analysing Conditional Income Distributions |
| acled.api | Automated Retrieval of ACLED Conflict Event Data |
| acmeR | Implements ACME Estimator of Bird and Bat Mortality by Wind Turbines |
| ACNE | Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization |
| acnr | Annotated Copy-Number Regions |
| acopula | Modelling Dependence with Multivariate Archimax (or any User-Defined Continuous) Copulas |
| AcousticNDLCodeR | Coding Sound Files for Use with NDL |
| acp | Autoregressive Conditional Poisson |
| aCRM | Convenience functions for analytical Customer Relationship Management |
| acroname | Engine for Acronyms and Initialisms |
| AcrossTic | A Cost-Minimal Regular Spanning Subgraph with TreeClust |
| acrt | Autocorrelation Robust Testing |
| acs | Download, Manipulate, and Present American Community Survey and Decennial Data from the US Census |
| ACSNMineR | Gene Enrichment Analysis from ACSN Maps or GMT Files |
| acss | Algorithmic Complexity for Short Strings |
| acss.data | Data Only: Algorithmic Complexity of Short Strings (Computed via Coding Theorem Method) |
| ACSWR | A Companion Package for the Book "A Course in Statistics with R" |
| act | Aligned Corpus Toolkit |
| ACTCD | Asymptotic Classification Theory for Cognitive Diagnosis |
| ActCR | Extract Circadian Rhythms Metrics from Actigraphy Data |
| actel | Acoustic Telemetry Data Analysis |
| ActFrag | Activity Fragmentation Metrics Extracted from Minute Level Activity Data |
| activatr | Utilities for Parsing and Plotting Activities |
| ActiveDriver | Finding Cancer Driver Proteins with Enriched Mutations in Post-Translational Modification Sites |
| ActiveDriverWGS | A Driver Discovery Tool for Cancer Whole Genomes |
| activegp | Gaussian Process Based Design and Analysis for the Active Subspace Method |
| ActivePathways | Integrative Pathway Enrichment Analysis of Multivariate Omics Data |
| activity | Animal Activity Statistics |
| activityCounts | Generate ActiLife Counts |
| ActivityIndex | Activity Index Calculation using Raw 'Accelerometry' Data |
| activPAL | Advanced Processing and Chart Generation from activPAL Events Files |
| activpalProcessing | Process activPAL Events Files |
| actogrammr | Read in Activity Data and Plot Actograms |
| actuar | Actuarial Functions and Heavy Tailed Distributions |
| actuaryr | Develop Actuarial Models |
| AcuityView | A Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity |
| acumos | 'Acumos' R Interface |
| ada | The R Package Ada for Stochastic Boosting |
| adabag | Applies Multiclass AdaBoost.M1, SAMME and Bagging |
| adagio | Discrete and Global Optimization Routines |
| adamethods | Archetypoid Algorithms and Anomaly Detection |
| AdapEnetClass | A Class of Adaptive Elastic Net Methods for Censored Data |
| AdapSamp | Adaptive Sampling Algorithms |
| adapt4pv | Adaptive Approaches for Signal Detection in Pharmacovigilance |
| adaptalint | Check Code Style Painlessly |
| AdaptFit | Adaptive Semiparametic Regression |
| AdaptFitOS | Adaptive Semiparametric Additive Regression with Simultaneous Confidence Bands and Specification Tests |
| AdaptGauss | Gaussian Mixture Models (GMM) |
| adaptiveGPCA | Adaptive Generalized PCA |
| AdaptiveSparsity | Adaptive Sparsity Models |
| adaptivetau | Tau-Leaping Stochastic Simulation |
| adaptMCMC | Implementation of a Generic Adaptive Monte Carlo Markov Chain Sampler |
| adaptMT | Adaptive P-Value Thresholding for Multiple Hypothesis Testing with Side Information |
| ADAPTS | Automated Deconvolution Augmentation of Profiles for Tissue Specific Cells |
| adaptsmoFMRI | Adaptive Smoothing of FMRI Data |
| adaptTest | Adaptive two-stage tests |
| AdaSampling | Adaptive Sampling for Positive Unlabeled and Label Noise Learning |
| ADCT | Adaptive Design in Clinical Trials |
| add2ggplot | Add to 'ggplot2' |
| addhaz | Binomial and Multinomial Additive Hazard Models |
| addhazard | Fit Additive Hazards Models for Survival Analysis |
| addinsJoaoMelo | Addins Made of Joao Melo |
| addinslist | Discover and Install Useful RStudio Addins |
| addinsOutline | 'RStudio' Addins for Show Outline of a R Markdown/'LaTeX' Project |
| additiveDEA | Additive Data Envelopment Analysis Models |
| additivityTests | Additivity Tests in the Two Way Anova with Single Sub-class Numbers |
| addreg | Additive Regression for Discrete Data |
| addScales | Adds Labeled Center Line and Scale Lines/Regions to Trellis Plots |
| ADDT | Analysis of Accelerated Destructive Degradation Test Data |
| ade4 | Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences |
| ade4TkGUI | 'ade4' Tcl/Tk Graphical User Interface |
| adegenet | Exploratory Analysis of Genetic and Genomic Data |
| adegraphics | An S4 Lattice-Based Package for the Representation of Multivariate Data |
| adehabitatHR | Home Range Estimation |
| adehabitatHS | Analysis of Habitat Selection by Animals |
| adehabitatLT | Analysis of Animal Movements |
| adehabitatMA | Tools to Deal with Raster Maps |
| adephylo | Exploratory Analyses for the Phylogenetic Comparative Method |
| adepro | A 'shiny' Application for the (Audio-)Visualization of Adverse Event Profiles |
| adept | Adaptive Empirical Pattern Transformation |
| adeptdata | Accelerometry Data Sets |
| AdequacyModel | Adequacy of Probabilistic Models and General Purpose Optimization |
| adespatial | Multivariate Multiscale Spatial Analysis |
| adfExplorer | Import from and Export to Amiga Disk Files |
| ADGofTest | Anderson-Darling GoF test |
| adheRenceRX | Assess Medication Adherence from Pharmaceutical Claims Data |
| AdhereR | Adherence to Medications |
| AdhereRViz | Interactive Visualisation of Medication Adherence Patterns |
| adhoc | Calculate Ad Hoc Distance Thresholds for DNA Barcoding Identification |
| adimpro | Adaptive Smoothing of Digital Images |
| adiv | Analysis of Diversity |
| AdjBQR | Adjusted Bayesian Quantile Regression Inference |
| adjclust | Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix |
| adjustedcranlogs | Remove Automated and Repeated Downloads from 'RStudio' 'CRAN' Download Logs |
| adklakedata | Adirondack Long-Term Lake Data |
| adlift | An Adaptive Lifting Scheme Algorithm |
| admisc | Adrian Dusa's Miscellaneous |
| AdMit | Adaptive Mixture of Student-t Distributions |
| admixr | An Interface for Running 'ADMIXTOOLS' Analyses |
| admixturegraph | Admixture Graph Manipulation and Fitting |
| ADMM | Algorithms using Alternating Direction Method of Multipliers |
| admmDensestSubmatrix | Alternating Direction Method of Multipliers to Solve Dense Dubmatrix Problem |
| ADMMnet | Regularized Model with Selecting the Number of Non-Zeros |
| ADMMsigma | Penalized Precision Matrix Estimation via ADMM |
| adnuts | No-U-Turn MCMC Sampling for 'ADMB' and 'TMB' Models |
| adoption | Modelling Adoption Process in Marketing |
| adoptr | Adaptive Optimal Two-Stage Designs in R |
| ADPclust | Fast Clustering Using Adaptive Density Peak Detection |
| ADPF | Use Least Squares Polynomial Regression and Statistical Testing to Improve Savitzky-Golay |
| adpss | Design and Analysis of Locally or Globally Efficient Adaptive Designs |
| ads | Spatial Point Patterns Analysis |
| adsDataHubR | Google Ads Data Hub API Client |
| ADtools | Automatic Differentiation Toolbox |
| AdvancedBasketballStats | Advanced Basketball Statistics |
| AdvBinomApps | Upper Clopper-Pearson Confidence Limits for Burn-in Studies under Additional Available Information |
| advclust | Object Oriented Advanced Clustering |
| AdvDif4 | Solving 1D Advection Bi-Flux Diffusion Equation |
| adventr | Interactive R Tutorials to Accompany Field (2016), "An Adventure in Statistics" |
| adwave | Wavelet Analysis of Genomic Data from Admixed Populations |
| adwordsR | Access the 'Google Adwords' API |
| AEDForecasting | Change Point Analysis in ARIMA Forecasting |
| AEenrich | Adverse Event Enrichment Tests |
| aemo | Download and Process AEMO Price and Demand Data |
| AEP | Statistical Modelling for Asymmetric Exponential Power Distribution |
| AER | Applied Econometrics with R |
| AeRobiology | A Computational Tool for Aerobiological Data |
| AF | Model-Based Estimation of Confounder-Adjusted Attributable Fractions |
| afc | Generalized Discrimination Score |
| afCEC | Active Function Cross-Entropy Clustering |
| afex | Analysis of Factorial Experiments |
| affinitymatrix | Estimation of Affinity Matrix |
| affluenceIndex | Affluence Indices |
| AFheritability | The Attributable Fraction (AF) Described as a Function of Disease Heritability, Prevalence and Intervention Specific Factors |
| AFM | Atomic Force Microscope Image Analysis |
| afmToolkit | Functions for Atomic Force Microscope Force-Distance Curves Analysis |
| afpt | Tools for Modelling of Animal Flight Performance |
| aftgee | Accelerated Failure Time Model with Generalized Estimating Equations |
| AGD | Analysis of Growth Data |
| aGE | Adaptive Set-Based Gene-Environment Interaction Test for Rare Variants |
| AggregateR | Aggregate Numeric, Date and Categorical Variables |
| aggregation | p-Value Aggregation Methods |
| AGHmatrix | Relationship Matrices for Diploid and Autopolyploid Species |
| aghq | Adaptive Gauss Hermite Quadrature for Bayesian Inference |
| agop | Aggregation Operators and Preordered Sets |
| AGPRIS | AGricultural PRoductivity in Space |
| AGread | Read Data Files from ActiGraph Monitors |
| agRee | Various Methods for Measuring Agreement |
| AgreementInterval | Agreement Interval of Two Measurement Methods |
| agricolae | Statistical Procedures for Agricultural Research |
| agridat | Agricultural Datasets |
| agriTutorial | Tutorial Analysis of Some Agricultural Experiments |
| agriwater | Evapotranspiration and Energy Fluxes Spatial Analysis |
| agrmt | Calculate Concentration and Dispersion in Ordered Rating Scales |
| agroclim | Climatic Indices for Agriculture |
| agrostab | Stability Analysis for Agricultural Research |
| AGSDest | Estimation in Adaptive Group Sequential Trials |
| agsemisc | Miscellaneous plotting and utility functions |
| agtboost | Adaptive and Automatic Gradient Boosting Computations |
| ahaz | Regularization for semiparametric additive hazards regression |
| AHM | Additive Heredity Model: Method for the Mixture-of-Mixtures Experiments |
| AHMbook | Functions and Data for the Book 'Applied Hierarchical Modeling in Ecology' Vols 1 and 2 |
| ahnr | An Implementation of the Artificial Hydrocarbon Networks |
| AhoCorasickTrie | Fast Searching for Multiple Keywords in Multiple Texts |
| AHPhybrid | AHP Hybrid Method |
| ahpsurvey | Analytic Hierarchy Process for Survey Data |
| ahptopsis2n | Hybrid Method for Multiple Criteria Decision-Making (MCDM) |
| aibd | Attraction Indian Buffet Distribution |
| AICcmodavg | Model Selection and Multimodel Inference Based on (Q)AIC(c) |
| AID | Box-Cox Power Transformation |
| aidar | Tools for Reading AIDA Files |
| aif360 | Help Detect and Mitigate Bias in Machine Learning Models |
| AIG | Automatic Item Generator |
| aimPlot | Create Pie Like Plot for Completeness |
| aimsir17 | Irish Weather Observing Stations Hourly Records for 2017 |
| aire.zmvm | Download Mexico City Pollution, Wind, and Temperature Data |
| airGR | Suite of GR Hydrological Models for Precipitation-Runoff Modelling |
| airGRdatassim | Ensemble-Based Data Assimilation with GR Hydrological Models |
| airGRteaching | Teaching Hydrological Modelling with the GR Rainfall-Runoff Models ('Shiny' Interface Included) |
| aiRly | R Wrapper for 'Airly' API |
| airportr | Convenience Tools for Working with Airport Data |
| airports | Data on Airports |
| airqualityES | Air Quality Measurements in Spain from 2011 to 2018 |
| airr | AIRR Data Representation Reference Library |
| AirSensor | Process and Display Data from Air Quality Sensors |
| airt | Evaluation of Algorithm Collections Using Item Response Theory |
| aiRthermo | Atmospheric Thermodynamics and Visualization |
| ajv | Another JSON Schema Validator |
| akc | Automatic Knowledge Classification |
| Ake | Associated Kernel Estimations |
| akiFlagger | Flags Acute Kidney Injury (AKI) |
| akima | Interpolation of Irregularly and Regularly Spaced Data |
| akmbiclust | Alternating K-Means Biclustering |
| akmeans | Adaptive Kmeans algorithm based on threshold |
| akmedoids | Anchored Kmedoids for Longitudinal Data Clustering |
| ALA4R | Atlas of Living Australia (ALA) Data and Resources in R |
| alabama | Constrained Nonlinear Optimization |
| alakazam | Immunoglobulin Clonal Lineage and Diversity Analysis |
| ALassoSurvIC | Adaptive Lasso for the Cox Regression with Interval Censored and Possibly Left Truncated Data |
| albatross | PARAFAC Analysis of Fluorescence Excitation-Emission Matrices |
| albopictus | Age-Structured Population Dynamics Model |
| ald | The Asymmetric Laplace Distribution |
| ALDqr | Quantile Regression Using Asymmetric Laplace Distribution |
| ALEPlot | Accumulated Local Effects (ALE) Plots and Partial Dependence (PD) Plots |
| aLFQ | Estimating Absolute Protein Quantities from Label-Free LC-MS/MS Proteomics Data |
| alfr | Connectivity to 'Alfresco' Content Management Repositories |
| alfred | Downloading Time Series from ALFRED Database for Various Vintages |
| algaeClassify | Determine Phytoplankton Functional Groups Based on Functional Traits |
| AlgDesign | Algorithmic Experimental Design |
| AlgebraicHaploPackage | Haplotype Two Snips Out of a Paired Group of Patients |
| algo | Implement an Address Search Auto Completion Menu on 'Shiny' Text Inputs Using the 'Algolia Places' 'Javascript' Library |
| algorithmia | Allows you to Easily Interact with the Algorithmia Platform |
| aliases2entrez | Converts Human gene symbols to entrez IDs |
| alignfigR | Visualizing Multiple Sequence Alignments with 'ggplot2' |
| alineR | Alignment of Phonetic Sequences Using the 'ALINE' Algorithm |
| allcontributors | Acknowledge all Contributors to a Project |
| alleHap | Allele Imputation and Haplotype Reconstruction from Pedigree Databases |
| allelematch | Identifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present |
| AlleleRetain | Allele Retention, Inbreeding, and Demography |
| AlleleShift | Predict and Visualize Population-Level Changes in Allele Frequencies in Response to Climate Change |
| allelic | A fast, unbiased and exact allelic exact test |
| allestimates | Effect Estimates from All Models |
| AllPossibleSpellings | Computes all of a word's possible spellings |
| alluvial | Alluvial Diagrams |
| almanac | Tools for Working with Recurrence Rules |
| alookr | Model Classifier for Binary Classification |
| alpaca | Fit GLM's with High-Dimensional k-Way Fixed Effects |
| alphabetr | Algorithms for High-Throughput Sequencing of Antigen-Specific T Cells |
| alphahull | Generalization of the Convex Hull of a Sample of Points in the Plane |
| alphaOutlier | Obtain Alpha-Outlier Regions for Well-Known Probability Distributions |
| AlphaPart | Partition/Decomposition of Breeding Values by Paths of Information |
| alphashape3d | Implementation of the 3D Alpha-Shape for the Reconstruction of 3D Sets from a Point Cloud |
| AlphaSimR | Breeding Program Simulations |
| alphastable | Inference for Stable Distribution |
| AlphaVantageClient | Wrapper for Alpha Vantage API |
| alphavantager | Lightweight R Interface to the Alpha Vantage API |
| alr4 | Data to Accompany Applied Linear Regression 4th Edition |
| ALS | Multivariate Curve Resolution Alternating Least Squares (MCR-ALS) |
| ALSCPC | Accelerated line search algorithm for simultaneous orthogonal transformation of several positive definite symmetric matrices to nearly diagonal form |
| ALSM | Companion to Applied Linear Statistical Models |
| altadata | API Wrapper for Altadata.io |
| altair | Interface to 'Altair' |
| altfuelr | Provides an Interface to the NREL Alternate Fuels Locator |
| altmeta | Alternative Meta-Analysis Methods |
| ALTopt | Optimal Experimental Designs for Accelerated Life Testing |
| altR2 | Alternative Estimators to Adjusted R-Squared |
| amap | Another Multidimensional Analysis Package |
| AMAP.Seq | Compare Gene Expressions from 2-Treatment RNA-Seq Experiments |
| amapGeocode | An Interface to the 'AutoNavi Maps' API Geocoding Services |
| amber | Automated Model Benchmarking R Package |
| ambhasGW | Ground Water Modelling |
| ambient | A Generator of Multidimensional Noise |
| ambiorix | Web Framework Inspired by 'Express.js' |
| AMCP | A Model Comparison Perspective |
| AMCTestmakeR | Generate LaTeX Code for Auto-Multiple-Choice (AMC) |
| ameco | European Commission Annual Macro-Economic (AMECO) Database |
| Amelia | A Program for Missing Data |
| amelie | Anomaly Detection with Normal Probability Functions |
| amen | Additive and Multiplicative Effects Models for Networks and Relational Data |
| AmericanCallOpt | This package includes pricing function for selected American call options with underlying assets that generate payouts |
| amerika | American Politics-Inspired Color Palette Generator |
| AmesHousing | The Ames Iowa Housing Data |
| AMGET | Post-processing tool for ADAPT 5 |
| AmigaFFH | Commodore Amiga File Format Handler |
| aml | Adaptive Mixed LASSO |
| ammistability | Additive Main Effects and Multiplicative Interaction Model Stability Parameters |
| AMModels | Adaptive Management Model Manager |
| AmmoniaConcentration | Un-Ionized Ammonia Concentration |
| AMOEBA | A Multidirectional Optimum Ecotope-Based Algorithm |
| AMORE | Artificial Neural Network Training and Simulating |
| ampd | An Algorithm for Automatic Peak Detection in Noisy Periodic and Quasi-Periodic Signals |
| AmpGram | Prediction of Antimicrobial Peptides |
| ampir | Predict Antimicrobial Peptides |
| AMPLE | Common Code for the 'AMPED' and 'PIMPLE' 'shiny' Apps for Stakeholder Engagement and Harvest Strategies |
| AmpliconDuo | Statistical Analysis of Amplicon Data of the Same Sample to Identify Artefacts |
| AMR | Antimicrobial Resistance Analysis |
| amt | Animal Movement Tools |
| AmyloGram | Prediction of Amyloid Proteins |
| AnaCoDa | Analysis of Codon Data under Stationarity using a Bayesian Framework |
| anacor | Simple and Canonical Correspondence Analysis |
| analogsea | Interface to 'Digital Ocean' |
| analogue | Analogue and Weighted Averaging Methods for Palaeoecology |
| analogueExtra | Additional Functions for Use with the Analogue Package |
| analysisPipelines | Compose Interoperable Analysis Pipelines & Put Them in Production |
| analyz | Model Layer for Automatic Data Analysis via CSV File Interpretation |
| AnalyzeFMRI | Functions for Analysis of fMRI Datasets Stored in the ANALYZE or NIFTI Format |
| analyzer | Data Analysis and Automated R Notebook Generation |
| anapuce | Tools for Microarray Data Analysis |
| AncestryMapper | Assigning Ancestry Based on Population References |
| AnchorRegression | Perform AnchorRegression |
| anchors | Statistical analysis of surveys with anchoring vignettes |
| AnDE | An extended Bayesian Learning Technique developed by Dr. Geoff Webb |
| andrews | Andrews curves |
| Andromeda | Asynchronous Disk-Based Representation of Massive Data |
| andurinha | Make Spectroscopic Data Processing Easier |
| anesrake | ANES Raking Implementation |
| AnglerCreelSurveySimulation | Simulate a Bus Route Creel Survey of Anglers |
| angstroms | Tools for 'ROMS' the Regional Ocean Modeling System |
| aniDom | Inferring Dominance Hierarchies and Estimating Uncertainty |
| anim.plots | Simple Animated Plots for R |
| animalEKF | Extended Kalman Filters for Animal Movement |
| AnimalHabitatNetwork | Networks Characterising the Physical Configurations of Animal Habitats |
| animalTrack | Animal track reconstruction for high frequency 2-dimensional (2D) or 3-dimensional (3D) movement data |
| animaltracker | Animal Tracker |
| animation | A Gallery of Animations in Statistics and Utilities to Create Animations |
| animint2 | Animated Interactive Grammar of Graphics |
| anipaths | Animation of Observed Trajectories Using Spline-Based Interpolation |
| aniview | Animate Shiny and R Markdown Content when it Comes into View |
| anMC | Compute High Dimensional Orthant Probabilities |
| ANN2 | Artificial Neural Networks for Anomaly Detection |
| anndata | Annotated Data |
| AnnotationBustR | Extract Subsequences from GenBank Annotations |
| AnnotLists | AnnotLists: A tool to annotate multiple lists from a specific annotation file |
| AnnuityRIR | Annuity Random Interest Rates |
| anocva | A Non-Parametric Statistical Test to Compare Clustering Structures |
| ANOM | Analysis of Means |
| anomalize | Tidy Anomaly Detection |
| anomaly | Detecting Anomalies in Data |
| anominate | Alpha-NOMINATE Ideal Point Estimator |
| ANOVAIREVA | Interactive Document for Working with Analysis of Variance |
| ANOVAreplication | Test ANOVA Replications by Means of the Prior Predictive p-Value |
| ANOVAShiny | Interactive Document for Working with Analysis of Variance |
| ANOVAShiny2 | Interactive Document for Working with Analysis of Variance |
| anovir | Analysis of Virulence |
| anscombiser | Create Datasets with Identical Summary Statistics |
| AntAngioCOOL | Anti-Angiogenic Peptide Prediction |
| antaresEditObject | Edit an 'Antares' Simulation |
| antaresProcessing | 'Antares' Results Processing |
| antaresRead | Import, Manipulate and Explore the Results of an 'Antares' Simulation |
| antaresViz | Antares Visualizations |
| anthro | Computation of the WHO Child Growth Standards |
| AnthropMMD | An R Package for Smith's Mean Measure of Divergence (MMD) |
| Anthropometry | Statistical Methods for Anthropometric Data |
| anticlust | Subset Partitioning via Anticlustering |
| antitrust | Tools for Antitrust Practitioners |
| antiword | Extract Text from Microsoft Word Documents |
| AntWeb | programmatic interface to the AntWeb |
| anybadger | Create Custom Pipeline Badges |
| anyflights | Query 'nycflights13'-Like Air Travel Data for Given Years and Airports |
| anyLib | Install and Load Any Package from CRAN, Bioconductor or Github |
| anytime | Anything to 'POSIXct' or 'Date' Converter |
| aod | Analysis of Overdispersed Data |
| aods3 | Analysis of Overdispersed Data using S3 Methods |
| aof | Ontogenetic Shifts in Central-Place Foraging Insects |
| aoos | Another Object Orientation System |
| Aoptbdtvc | A-Optimal Block Designs for Comparing Test Treatments with Controls |
| aoristic | Generates Aoristic Probability Distributions |
| aos | Animate on Scroll Library for 'shiny' |
| AOV1R | Inference in the Balanced One-Way ANOVA Model with Random Factor |
| apa | Format Outputs of Statistical Tests According to APA Guidelines |
| ApacheLogProcessor | Process the Apache Web Server Log Files |
| apaTables | Create American Psychological Association (APA) Style Tables |
| apaText | Create R Markdown Text for Results in the Style of the American Psychological Association (APA) |
| apc | Age-Period-Cohort Analysis |
| APCanalysis | Analysis of Unreplicated Orthogonal Experiments using All Possible Comparisons |
| apcf | Adapted Pair Correlation Function |
| APCI | A New Age-Period-Cohort Model for Describing and Investigating Inter-Cohort Differences and Life Course Dynamics |
| apcluster | Affinity Propagation Clustering |
| aPCoA | Covariate Adjusted PCoA Plot |
| apdesign | An Implementation of the Additive Polynomial Design Matrix |
| ape | Analyses of Phylogenetics and Evolution |
| apercu | Quick Look at your Data |
| apex | Phylogenetic Methods for Multiple Gene Data |
| apexcharter | Create Interactive Chart with the JavaScript 'ApexCharts' Library |
| APFr | Multiple Testing Approach using Average Power Function (APF) and Bayes FDR Robust Estimation |
| APfun | Geo-Processing Helper Functions |
| aphid | Analysis with Profile Hidden Markov Models |
| APIS | Auto-Adaptive Parentage Inference Software Tolerant to Missing Parents |
| aplore3 | Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd Ed., 2013) |
| aplot | Decorate a 'ggplot' with Associated Information |
| aplpack | Another Plot Package: 'Bagplots', 'Iconplots', 'Summaryplots', Slider Functions and Others |
| APML | An Approach for Machine-Learning Modelling |
| APML0 | Augmented and Penalized Minimization Method L0 |
| apng | Convert Png Files into Animated Png |
| apollo | Tools for Choice Model Estimation and Application |
| APPEstimation | Adjusted Prediction Model Performance Estimation |
| applicable | A Compilation of Applicability Domain Methods |
| AppliedPredictiveModeling | Functions and Data Sets for 'Applied Predictive Modeling' |
| appnn | Amyloid Propensity Prediction Neural Network |
| approximator | Bayesian Prediction of Complex Computer Codes |
| approxmatch | Approximately Optimal Fine Balance Matching with Multiple Groups |
| aprean3 | Datasets from Draper and Smith "Applied Regression Analysis" (3rd Ed., 1998) |
| apricom | Tools for the a Priori Comparison of Regression Modelling Strategies |
| aprof | Amdahl's Profiler, Directed Optimization Made Easy |
| APSIMBatch | Analysis the output of Apsim software |
| apsimx | Inspect, Read, Edit and Run 'APSIM' "Next Generation" and 'APSIM' Classic |
| apsrtable | apsrtable model-output formatter for social science |
| apt | Asymmetric Price Transmission |
| aptg | Automatic Phylogenetic Tree Generator |
| APtools | Average Positive Predictive Values (AP) for Binary Outcomes and Censored Event Times |
| apTreeshape | Analyses of Phylogenetic Treeshape |
| apyramid | Visualize Population Pyramids Aggregated by Age |
| AQLSchemes | Retrieving Acceptance Sampling Schemes |
| aqp | Algorithms for Quantitative Pedology |
| AQuadtree | Confidentiality of Spatial Point Data |
| AquaEnv | Integrated Development Toolbox for Aquatic Chemical Model Generation |
| AR | Another Look at the Acceptance-Rejection Method |
| ar.matrix | Simulate Auto Regressive Data from Precision Matricies |
| arabic2kansuji | Convert Arabic Numerals to Kansuji |
| arabicStemR | Arabic Stemmer for Text Analysis |
| ArArRedux | Rigorous Data Reduction and Error Propagation of Ar40 / Ar39 Data |
| aRbs | Find Arbitrage Opportunities for Sports Matches |
| arc | Association Rule Classification |
| ARCensReg | Fitting Univariate Censored Linear Regression Model with Autoregressive Errors |
| ArchaeoChron | Bayesian Modeling of Archaeological Chronologies |
| ArchaeoPhases | Post-Processing of the Markov Chain Simulated by 'ChronoModel', 'Oxcal' or 'BCal' |
| ArchaeoPhases.dataset | Data Sets for 'ArchaeoPhases' Vignettes |
| archdata | Example Datasets from Archaeological Research |
| archeofrag | Refitting and Stratigraphic Analysis in Archeology |
| archetypes | Archetypal Analysis |
| archiDART | Plant Root System Architecture Analysis Using DART and RSML Files |
| archivist | Tools for Storing, Restoring and Searching for R Objects |
| archivist.github | Tools for Archiving, Managing and Sharing R Objects via GitHub |
| ArCo | Artificial Counterfactual Package |
| ARCokrig | Autoregressive Cokriging Models for Multifidelity Codes |
| arcos | Load ARCOS Prescription Data Prepared by the Washington Post |
| arcpullr | Pull Data from an 'ArcGIS REST' API |
| arctools | Processing and Physical Activity Summaries of Minute Level Activity Data |
| ArDec | Time series autoregressive-based decomposition |
| ARDL | ARDL, ECM and Bounds-Test for Cointegration |
| areal | Areal Weighted Interpolation |
| arealDB | Harmonise and Integrate Heterogeneous Areal Data |
| areaplot | Plot Stacked Areas and Confidence Bands as Filled Polygons |
| arena2r | Plots, Summary Statistics and Tools for Arena Simulation Users |
| arenar | Arena for the Exploration and Comparison of any ML Models |
| arfima | Fractional ARIMA (and Other Long Memory) Time Series Modeling |
| argo | Accurate Estimation of Influenza Epidemics using Google Search Data |
| argon2 | Secure Password Hashing |
| argonDash | Argon Shiny Dashboard Template |
| argonR | R Interface to Argon HTML Design |
| argosfilter | Argos locations filter |
| argparse | Command Line Optional and Positional Argument Parser |
| argparser | Command-Line Argument Parser |
| ArgumentCheck | Improved Communication to Users with Respect to Problems in Function Arguments |
| ARHT | Adaptable Regularized Hotelling's T^2 Test for High-Dimensional Data |
| ari | Automated R Instructor |
| ARIbrain | All-Resolution Inference |
| aricode | Efficient Computations of Standard Clustering Comparison Measures |
| ariExtra | Tools for Creating Automated Courses |
| arkdb | Archive and Unarchive Databases Using Flat Files |
| arkhe | Representation of Archaeological Data |
| arm | Data Analysis Using Regression and Multilevel/Hierarchical Models |
| armada | A Statistical Methodology to Select Covariates in High-Dimensional Data under Dependence |
| armspp | Adaptive Rejection Metropolis Sampling (ARMS) via 'Rcpp' |
| arnie | "Arnie" box office records 1982-2014 |
| AROC | Covariate-Adjusted Receiver Operating Characteristic Curve Inference |
| aroma.affymetrix | Analysis of Large Affymetrix Microarray Data Sets |
| aroma.apd | A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated] |
| aroma.cn | Copy-Number Analysis of Large Microarray Data Sets |
| aroma.core | Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework |
| Arothron | Geometric Morphometric Methods and Virtual Anthropology Tools |
| ARpLMEC | Fitting Autoregressive Censored Mixed-Effects Models |
| ARPobservation | Tools for Simulating Direct Behavioral Observation Recording Procedures Based on Alternating Renewal Processes |
| arpr | Advanced R Pipes |
| aRpsDCA | Arps Decline Curve Analysis in R |
| arrangements | Fast Generators and Iterators for Permutations, Combinations, Integer Partitions and Compositions |
| arrApply | Apply a Function to a Margin of an Array |
| ArrayBin | Binarization of numeric data arrays |
| arrayhelpers | Convenience Functions for Arrays |
| arrow | Integration to 'Apache' 'Arrow' |
| ars | Adaptive Rejection Sampling |
| arse | Area of Resilience to Stress Event |
| arsenal | An Arsenal of 'R' Functions for Large-Scale Statistical Summaries |
| ART | Aligned Rank Transform for Nonparametric Factorial Analysis |
| artfima | ARTFIMA Model Estimation |
| ARTool | Aligned Rank Transform |
| ARTP2 | Pathway and Gene-Level Association Test |
| arules | Mining Association Rules and Frequent Itemsets |
| arulesCBA | Classification Based on Association Rules |
| arulesNBMiner | Mining NB-Frequent Itemsets and NB-Precise Rules |
| arulesSequences | Mining Frequent Sequences |
| arulesViz | Visualizing Association Rules and Frequent Itemsets |
| aRxiv | Interface to the arXiv API |
| asaur | Data Sets for "Applied Survival Analysis Using R"" |
| asbio | A Collection of Statistical Tools for Biologists |
| ascii | Export R Objects to Several Markup Languages |
| asciicast | Create 'Ascii' Screen Casts from R Scripts |
| asciichartr | Lightweight ASCII Line Graphs |
| asciiruler | Render an ASCII Ruler |
| asciiSetupReader | Reads Fixed-Width ASCII Data Files (.txt or .dat) that Have Accompanying Setup Files (.sps or .sas) |
| asd | Simulations for Adaptive Seamless Designs |
| asdreader | Reading ASD Binary Files in R |
| ASGS.foyer | Interface to the Australian Statistical Geography Standard |
| ash | David Scott's ASH Routines |
| ashr | Methods for Adaptive Shrinkage, using Empirical Bayes |
| asht | Applied Statistical Hypothesis Tests |
| AsioHeaders | 'Asio' C++ Header Files |
| ASIP | Automated Satellite Image Processing |
| askpass | Safe Password Entry for R, Git, and SSH |
| aslib | Interface to the Algorithm Selection Benchmark Library |
| ASMap | Linkage Map Construction using the MSTmap Algorithm |
| asnipe | Animal Social Network Inference and Permutations for Ecologists |
| aspace | A collection of functions for estimating centrographic statistics and computational geometries for spatial point patterns |
| ASPBay | Bayesian Inference on Causal Genetic Variants using Affected Sib-Pairs Data |
| aSPC | An Adaptive Sum of Powered Correlation Test (aSPC) for Global Association Between Two Random Vectors |
| aspect | A General Framework for Multivariate Analysis with Optimal Scaling |
| aspi | Analysis of Symmetry of Parasitic Infections |
| aSPU | Adaptive Sum of Powered Score Test |
| asremlPlus | Augments 'ASReml-R' in Fitting Mixed Models and Packages Generally in Exploring Prediction Differences |
| ASSA | Applied Singular Spectrum Analysis (ASSA) |
| assert | Validate Function Arguments |
| assertable | Verbose Assertions for Tabular Data (Data.frames and Data.tables) |
| assertive | Readable Check Functions to Ensure Code Integrity |
| assertive.base | A Lightweight Core of the 'assertive' Package |
| assertive.code | Assertions to Check Properties of Code |
| assertive.data | Assertions to Check Properties of Data |
| assertive.data.uk | Assertions to Check Properties of Strings |
| assertive.data.us | Assertions to Check Properties of Strings |
| assertive.datetimes | Assertions to Check Properties of Dates and Times |
| assertive.files | Assertions to Check Properties of Files |
| assertive.matrices | Assertions to Check Properties of Matrices |
| assertive.models | Assertions to Check Properties of Models |
| assertive.numbers | Assertions to Check Properties of Numbers |
| assertive.properties | Assertions to Check Properties of Variables |
| assertive.reflection | Assertions for Checking the State of R |
| assertive.sets | Assertions to Check Properties of Sets |
| assertive.strings | Assertions to Check Properties of Strings |
| assertive.types | Assertions to Check Types of Variables |
| assertr | Assertive Programming for R Analysis Pipelines |
| assertthat | Easy Pre and Post Assertions |
| AssetCorr | Estimating Asset Correlations from Default Data |
| AssetPricing | Optimal Pricing of Assets with Fixed Expiry Date |
| assignPOP | Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework |
| assignR | Infer Geographic Origin from Isotopic Data |
| assist | A Suite of R Functions Implementing Spline Smoothing Techniques |
| ASSISTant | Adaptive Subgroup Selection in Group Sequential Trials |
| AssocAFC | Allele Frequency Comparison |
| assocInd | Implements New and Existing Association Indices for Constructing Animal Social Networks |
| ASSOCShiny | Interactive Document for Working with Association Rule Mining Analysis |
| AssocTests | Genetic Association Studies |
| assortnet | Calculate the Assortativity Coefficient of Weighted and Binary Networks |
| AssotesteR | Statistical Tests for Genetic Association Studies |
| AST | Age-Spatial-Temporal Model |
| aster | Aster Models |
| aster2 | Aster Models |
| astrochron | A Computational Tool for Astrochronology |
| astrodatR | Astronomical Data |
| astroFns | Astronomy: time and position functions, misc. utilities |
| astrolibR | Astronomy Users Library |
| astsa | Applied Statistical Time Series Analysis |
| asus | Adaptive SURE Thresholding Using Side Information |
| asVPC | Average Shifted Visual Predictive Checks |
| AsyK | Kernel Density Estimation and Selection of Optimum Bandwidth |
| asymLD | Asymmetric Linkage Disequilibrium (ALD) for Polymorphic Genetic Data |
| asymmetry | Multidimensional Scaling of Asymmetric Data |
| asymmetry.measures | Asymmetry Measures for Probability Density Functions |
| asympTest | A Simple R Package for Classical Parametric Statistical Tests and Confidence Intervals in Large Samples |
| asymptor | Estimate Asymptomatic Cases via Capture/Recapture Methods |
| AsynchLong | Regression Analysis of Sparse Asynchronous Longitudinal Data |
| asypow | Calculate Power Utilizing Asymptotic Likelihood Ratio Methods |
| ata | Automated Test Assembly |
| atable | Create Tables for Reporting Clinical Trials |
| atakrig | Area-to-Area Kriging |
| ATE | Inference for Average Treatment Effects using Covariate Balancing |
| atlas | Stanford 'ATLAS' Search Engine API |
| atmcmc | Automatically Tuned Markov Chain Monte Carlo |
| ATmet | Advanced Tools for Metrology |
| atmopt | Analysis-of-Marginal-Tail-Means |
| AtmRay | Acoustic Traveltime Calculations for 1-D Atmospheric Models |
| ATR | Alternative Tree Representation |
| aTSA | Alternative Time Series Analysis |
| atsd | Support Querying Axibase Time-Series Database |
| attachment | Deal with Dependencies |
| attempt | Tools for Defensive Programming |
| attenuation | Correcting for Attenuation Due to Measurement Error |
| atus | American Time Use Survey Data |
| AUC | Threshold independent performance measures for probabilistic classifiers |
| aucm | AUC Maximization |
| AUCRF | Variable Selection with Random Forest and the Area Under the Curve |
| auctestr | Statistical Testing for AUC Data |
| auctionr | Estimate First-Price Auction Model |
| audio | Audio Interface for R |
| audiolyzR | audiolyzR: Give your data a listen |
| audiometry | Standard Conform Pure Tone Audiometry (PTA) Plots |
| audit | Bounds for Accounting Populations |
| auditor | Model Audit - Verification, Validation, and Error Analysis |
| augmentedRCBD | Analysis of Augmented Randomised Complete Block Designs |
| augSIMEX | Analysis of Data with Mixed Measurement Error and Misclassification in Covariates |
| auk | eBird Data Extraction and Processing in R |
| aurelius | Generates PFA Documents from R Code and Optionally Runs Them |
| AurieLSHGaussian | Creates a Neighbourhood Using Locality Sensitive Hashing for Gaussian Projections |
| auRoc | Various Methods to Estimate the AUC |
| ausplotsR | TERN AusPlots Analysis Package |
| AUtests | Approximate Unconditional and Permutation Tests |
| auth0 | Secure Authentication in Shiny with Auth0 |
| auto.pca | Automatic Variable Reduction Using Principal Component Analysis |
| autoBagging | Learning to Rank Bagging Workflows with Metalearning |
| autocogs | Automatic Cognostic Summaries |
| autoCovariateSelection | Automated Covariate Selection Using HDPS Algorithm |
| AutoDeskR | An Interface to the 'AutoDesk' 'API' Platform |
| autoencoder | Sparse Autoencoder for Automatic Learning of Representative Features from Unlabeled Data |
| autoFRK | Automatic Fixed Rank Kriging |
| autoharp | Semi-Automatic Grading of R and Rmd Scripts |
| autoimage | Multiple Heat Maps for Projected Coordinates |
| autokeras | R Interface to 'AutoKeras' |
| automagic | Automagically Document and Install Packages Necessary to Run R Code |
| automap | Automatic interpolation package |
| automl | Deep Learning with Metaheuristic |
| autoMrP | Improving MrP with Ensemble Learning |
| automultinomial | Models for Spatially Correlated Data |
| AutoPipe | Automated Transcriptome Classifier Pipeline: Comprehensive Transcriptome Analysis |
| autoplotly | Automatic Generation of Interactive Visualizations for Statistical Results |
| Autoplotprotein | Development of Visualization Tools for Protein Sequence |
| AutoregressionMDE | Minimum Distance Estimation in Autoregressive Model |
| AutoSEARCH | General-to-Specific (GETS) Modelling |
| Autoseed | Retrieve Disease-Related Genes from Public Sources |
| autoshiny | Automatic Transformation of an 'R' Function into a 'shiny' App |
| AutoStepwiseGLM | Builds Stepwise GLMs via Train and Test Approach |
| autostsm | Automatic Structural Time Series Models |
| autota | Auto TA |
| autothresholdr | An R Port of the 'ImageJ' Plugin 'Auto Threshold' |
| autoTS | Automatic Model Selection and Prediction for Univariate Time Series |
| av | Working with Audio and Video in R |
| available | Check if the Title of a Package is Available, Appropriate and Interesting |
| avar | Allan Variance |
| averisk | Calculation of Average Population Attributable Fractions and Confidence Intervals |
| aVirtualTwins | Adaptation of Virtual Twins Method from Jared Foster |
| avocado | Weekly Hass Avocado Sales Summary |
| AWAPer | Catchment Area Weighted Climate Data Anywhere in Australia |
| aweek | Convert Dates to Arbitrary Week Definitions |
| aweSOM | Interactive Self-Organizing Maps |
| AWR | 'AWS' Java 'SDK' for R |
| AWR.Athena | 'AWS' Athena 'DBI' Wrapper |
| AWR.Kinesis | Amazon 'Kinesis' Consumer Application for Stream Processing |
| AWR.KMS | A Simple Client to the 'AWS' Key Management Service |
| aws | Adaptive Weights Smoothing |
| aws.alexa | Client for the Amazon Alexa Web Information Services API |
| aws.comprehend | Client for 'AWS Comprehend' |
| aws.ec2metadata | Get EC2 Instance Metadata |
| aws.iam | AWS IAM Client Package |
| aws.kms | 'AWS Key Management Service' Client Package |
| aws.lambda | AWS Lambda Client Package |
| aws.polly | Client for AWS Polly |
| aws.s3 | 'AWS S3' Client Package |
| aws.signature | Amazon Web Services Request Signatures |
| aws.transcribe | Client for 'AWS Transcribe' |
| aws.translate | Client for 'AWS Translate' |
| awsMethods | Class and Methods Definitions for Packages 'aws', 'adimpro', 'fmri', 'dwi' |
| aziztest | Novel Statistical Test for Aberration Enrichment |
| AzureAuth | Authentication Services for Azure Active Directory |
| AzureCognitive | Interface to Azure Cognitive Services |
| AzureContainers | Interface to 'Container Instances', 'Docker Registry' and 'Kubernetes' in 'Azure' |
| AzureCosmosR | Interface to the 'Azure Cosmos DB' 'NoSQL' Database Service |
| AzureGraph | Simple Interface to 'Microsoft Graph' |
| AzureKeyVault | Key and Secret Management in 'Azure' |
| AzureKusto | Interface to 'Kusto'/'Azure Data Explorer' |
| azuremlsdk | Interface to the 'Azure Machine Learning' 'SDK' |
| AzureQstor | Interface to 'Azure Queue Storage' |
| AzureRMR | Interface to 'Azure Resource Manager' |
| AzureStor | Storage Management in 'Azure' |
| AzureTableStor | Interface to the Table Storage Service in 'Azure' |
| AzureVision | Interface to Azure Computer Vision Services |
| AzureVM | Virtual Machines in 'Azure' |
| AzureVMmetadata | Interface to Azure Virtual Machine Instance Metadata |
| b6e6rl | Adaptive differential evolution, b6e6rl variant |
| babar | Bayesian Bacterial Growth Curve Analysis in R |
| babel | Ribosome Profiling Data Analysis |
| babelwhale | Talking to 'Docker' and 'Singularity' Containers |
| babette | Control 'BEAST2' |
| BaBooN | Bayesian Bootstrap Predictive Mean Matching - Multiple and Single Imputation for Discrete Data |
| babsim.hospital | Bartz & Bartz Simulation Hospital |
| babynames | US Baby Names 1880-2017 |
| BACA | Bubble Chart to Compare Biological Annotations by using DAVID |
| BacArena | Modeling Framework for Cellular Communities in their Environments |
| BACCO | Bayesian Analysis of Computer Code Output (BACCO) |
| BACCT | Bayesian Augmented Control for Clinical Trials |
| bacistool | Bayesian Classification and Information Sharing (BaCIS) Tool for the Design of Multi-Group Phase II Clinical Trials |
| backbone | Extracts the Backbone from Weighted Graphs |
| backpipe | Backward Pipe (Right-to-Left) Operator |
| backports | Reimplementations of Functions Introduced Since R-3.0.0 |
| backShift | Learning Causal Cyclic Graphs from Unknown Shift Interventions |
| backtest | Exploring Portfolio-Based Conjectures About Financial Instruments |
| bacondecomp | Goodman-Bacon Decomposition |
| BACprior | Choice of the Hyperparameter Omega in the Bayesian Adjustment for Confounding (BAC) Algorithm |
| bacr | Bayesian Adjustment for Confounding |
| badgecreatr | Create Badges for 'Travis', 'Repostatus' 'Codecov.io' Etc in Github Readme |
| badger | Badge for R Package |
| BAEssd | Bayesian Average Error approach to Sample Size Determination |
| baggedcv | Bagged Cross-Validation for Kernel Density Bandwidth Selection |
| baggr | Bayesian Aggregate Treatment Effects |
| BAGofT | A Binary Regression Adaptive Goodness-of-Fit Test (BAGofT) |
| baguette | Efficient Model Functions for Bagging |
| bahc | Filter Covariance and Correlation Matrices with Bootstrapped-Averaged Hierarchical Ansatz |
| bain | Bayes Factors for Informative Hypotheses |
| baitmet | Library Driven Compound Profiling in Gas Chromatography - Mass Spectrometry Data |
| balance | Visualize Balances of Compositional Data |
| BalanceCheck | Balance Check for Multiple Covariates in Matched Observational Studies |
| BalancedSampling | Balanced and Spatially Balanced Sampling |
| BALCONY | Better ALignment CONsensus analYsis |
| BALD | Robust Loss Development Using MCMC |
| Ball | Statistical Inference and Sure Independence Screening via Ball Statistics |
| BALLI | Expression RNA-Seq Data Analysis Based on Linear Mixed Model |
| BallMapper | The Ball Mapper Algorithm |
| BaM | Functions and Datasets for "Bayesian Methods: A Social and Behavioral Sciences Approach" |
| bama | High Dimensional Bayesian Mediation Analysis |
| BAMBI | Bivariate Angular Mixture Models |
| bamboo | Protein Secondary Structure Prediction Using the Bamboo Method |
| bamdit | Bayesian Meta-Analysis of Diagnostic Test Data |
| bamlss | Bayesian Additive Models for Location, Scale, and Shape (and Beyond) |
| BAMMtools | Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees |
| BaMORC | Bayesian Model Optimized Reference Correction Method for Assigned and Unassigned Protein NMR Spectra |
| bamp | Bayesian Age-Period-Cohort Modeling and Prediction |
| bandit | Functions for simple A/B split test and multi-armed bandit analysis |
| bang | Bayesian Analysis, No Gibbs |
| bannerCommenter | Make Banner Comments with a Consistent Format |
| BANOVA | Hierarchical Bayesian ANOVA Models |
| banR | R Client for the BAN API |
| banter | BioAcoustic EveNT ClassifiER |
| banxicoR | Download Data from the Bank of Mexico |
| bapred | Batch Effect Removal and Addon Normalization (in Phenotype Prediction using Gene Data) |
| BaPreStoPro | Bayesian Prediction of Stochastic Processes |
| BarBorGradient | Function Minimum Approximator |
| barcode | Barcode distribution plots |
| baRcodeR | Label Creation for Tracking and Collecting Data from Biological Samples |
| BarcodingR | Species Identification using DNA Barcodes |
| BAREB | A Bayesian Repulsive Biclustering Model for Periodontal Data |
| BARIS | Access and Import Data from the French Open Data Portal |
| Barnard | Barnard's Unconditional Test |
| barplot3d | Create 3D Barplots |
| barsurf | Contour Plots, 3D Plots, Vector Fields and Heatmaps |
| BART | Bayesian Additive Regression Trees |
| bartBMA | Bayesian Additive Regression Trees using Bayesian Model Averaging |
| bartCause | Causal Inference using Bayesian Additive Regression Trees |
| bartMachine | Bayesian Additive Regression Trees |
| bartMachineJARs | bartMachine JARs |
| Barycenter | Regularized Wasserstein Distances and Barycenters |
| BAS | Bayesian Variable Selection and Model Averaging using Bayesian Adaptive Sampling |
| basad | Bayesian Variable Selection with Shrinking and Diffusing Priors |
| base.rms | Convert Regression Between Base Function and 'rms' Package |
| base2grob | Convert Base Plot to 'grob' Object |
| base64 | Base64 Encoder and Decoder |
| base64enc | Tools for base64 encoding |
| base64url | Fast and URL-Safe Base64 Encoder and Decoder |
| baseballDBR | Sabermetrics and Advanced Baseball Statistics |
| baseflow | Computes Hydrograph Separation |
| basefun | Infrastructure for Computing with Basis Functions |
| baseline | Baseline Correction of Spectra |
| BaseSet | Working with Sets the Tidy Way |
| basetheme | Themes for Base Graphics Plots |
| basf | Plot Simple Features with 'base' Sensibilities |
| basicMCMCplots | Trace Plots, Density Plots and Chain Comparisons for MCMC Samples |
| basicspace | Recovering a Basic Space from Issue Scales |
| basictabler | Construct Rich Tables for Output to 'HTML'/'Excel' |
| basicTrendline | Add Trendline and Confidence Interval of Basic Regression Models to Plot |
| BASiNET | Classification of RNA Sequences using Complex Network Theory |
| BASIX | BASIX: An efficient C/C++ toolset for R |
| basket | Basket Trial Analysis |
| BasketballAnalyzeR | Analysis and Visualization of Basketball Data |
| BASS | Bayesian Adaptive Spline Surfaces |
| BaSTA | Age-Specific Survival Analysis from Incomplete Capture-Recapture/Recovery Data |
| bastah | Big Data Statistical Analysis for High-Dimensional Models |
| BAT | Biodiversity Assessment Tools |
| batata | Managing Packages Removal and Installation |
| batch | Batching Routines in Parallel and Passing Command-Line Arguments to R |
| BatchExperiments | Statistical Experiments on Batch Computing Clusters |
| BatchGetSymbols | Downloads and Organizes Financial Data for Multiple Tickers |
| BatchJobs | Batch Computing with R |
| batchmeans | Consistent Batch Means Estimation of Monte Carlo Standard Errors |
| batchr | Batch Process Files |
| batchscr | Batch Script Helpers |
| batchtools | Tools for Computation on Batch Systems |
| BaTFLED3D | Bayesian Tensor Factorization Linked to External Data |
| batman | Convert Categorical Representations of Logicals to Actual Logicals |
| batteryreduction | An R Package for Data Reduction by Battery Reduction |
| BAwiR | Analysis of Basketball Data |
| baycn | Bayesian Inference for Causal Networks |
| bayefdr | Bayesian Estimation and Optimisation of Expected False Discovery Rate |
| bayes4psy | User Friendly Bayesian Data Analysis for Psychology |
| bayesAB | Fast Bayesian Methods for AB Testing |
| bayesammi | Bayesian Estimation of the Additive Main Effects and Multiplicative Interaction Model |
| bayesanova | Bayesian Inference in the Analysis of Variance via Markov Chain Monte Carlo in Gaussian Mixture Models |
| BayesARIMAX | Bayesian Estimation of ARIMAX Model |
| BayesBEKK | Bayesian Estimation of Bivariate Volatility Model |
| BayesBinMix | Bayesian Estimation of Mixtures of Multivariate Bernoulli Distributions |
| bayesbio | Miscellaneous Functions for Bioinformatics and Bayesian Statistics |
| bayesboot | An Implementation of Rubin's (1981) Bayesian Bootstrap |
| BayesBP | Bayesian Estimation using Bernstein Polynomial Fits Rate Matrix |
| bayesbr | Beta Regression on a Bayesian Model |
| BayesCombo | Bayesian Evidence Combination |
| BayesComm | Bayesian Community Ecology Analysis |
| bayescopulareg | Bayesian Copula Regression |
| bayescount | Power Calculations and Bayesian Analysis of Count Distributions and FECRT Data using MCMC |
| BayesCR | Bayesian Analysis of Censored Regression Models Under Scale Mixture of Skew Normal Distributions |
| bayesCT | Simulation and Analysis of Adaptive Bayesian Clinical Trials |
| BayesCTDesign | Two Arm Bayesian Clinical Trial Design with and Without Historical Control Data |
| BayesDA | Functions and Datasets for the book "Bayesian Data Analysis" |
| bayesdfa | Bayesian Dynamic Factor Analysis (DFA) with 'Stan' |
| bayesdistreg | Bayesian Distribution Regression |
| bayesDP | Tools for the Bayesian Discount Prior Function |
| bayesefa | Bayesian Exploratory Factor |
| BayesESS | Determining Effective Sample Size |
| BayesFactor | Computation of Bayes Factors for Common Designs |
| BayesFM | Bayesian Inference for Factor Modeling |
| bayesforecast | Bayesian Time Series Modeling with Stan |
| bayesGAM | Fit Multivariate Response Generalized Additive Models using Hamiltonian Monte Carlo |
| bayesGARCH | Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations |
| BayesGESM | Bayesian Analysis of Generalized Elliptical Semi-Parametric Models and Flexible Measurement Error Models |
| BayesGOF | Bayesian Modeling via Frequentist Goodness-of-Fit |
| BayesGPfit | Fast Bayesian Gaussian Process Regression Fitting |
| BayesGWQS | Bayesian Grouped Weighted Quantile Sum Regression |
| bayesian | Bindings for Bayesian TidyModels |
| BayesianAnimalTracker | Bayesian Melding of GPS and DR Path for Animal Tracking |
| bayesianETAS | Bayesian Estimation of the ETAS Model for Earthquake Occurrences |
| BayesianFROC | FROC Analysis by Bayesian Approaches |
| Bayesiangammareg | Bayesian Gamma Regression: Joint Mean and Shape Modeling |
| BayesianGLasso | Bayesian Graphical Lasso |
| BayesianLaterality | Predict Brain Asymmetry Based on Handedness and Dichotic Listening |
| BayesianNetwork | Bayesian Network Modeling and Analysis |
| BayesianPower | Sample Size and Power for Comparing Inequality Constrained Hypotheses |
| BayesianReasoning | Plot Positive and Negative Predictive Values for Medical Tests |
| BayesianTools | General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics |
| bayesImageS | Bayesian Methods for Image Segmentation using a Potts Model |
| BayesLCA | Bayesian Latent Class Analysis |
| bayesLife | Bayesian Projection of Life Expectancy |
| bayeslincom | Linear Combinations of Bayesian Posterior Samples |
| BayesLN | Bayesian Inference for Log-Normal Data |
| BayesLogit | PolyaGamma Sampling |
| bayesloglin | Bayesian Analysis of Contingency Table Data |
| bayeslongitudinal | Adjust Longitudinal Regression Models Using Bayesian Methodology |
| bayesm | Bayesian Inference for Marketing/Micro-Econometrics |
| BayesMallows | Bayesian Preference Learning with the Mallows Rank Model |
| BayesMassBal | Bayesian Data Reconciliation of Separation Processes |
| bayesmeta | Bayesian Random-Effects Meta-Analysis |
| BayesMFSurv | Bayesian Misclassified-Failure Survival Model |
| bayesmix | Bayesian Mixture Models with JAGS |
| BayesMixSurv | Bayesian Mixture Survival Models using Additive Mixture-of-Weibull Hazards, with Lasso Shrinkage and Stratification |
| bayesmove | Non-Parametric Bayesian Analyses of Animal Movement |
| BayesMRA | Bayesian Multi-Resolution Gaussian Process Approximations |
| BayesNetBP | Bayesian Network Belief Propagation |
| BayesNI | BayesNI: Bayesian Testing Procedure for Noninferiority with Binary Endpoints |
| BayesNSGP | Bayesian Analysis of Non-Stationary Gaussian Process Models |
| BayesPieceHazSelect | Variable Selection in a Hierarchical Bayesian Model for a Hazard Function |
| BayesPiecewiseICAR | Hierarchical Bayesian Model for a Hazard Function |
| bayesplot | Plotting for Bayesian Models |
| bayesPop | Probabilistic Population Projection |
| BayesPostEst | Generate Postestimation Quantities for Bayesian MCMC Estimation |
| bayespref | Hierarchical Bayesian analysis of ecological count data |
| BayesProject | Fast Projection Direction for Multivariate Changepoint Detection |
| bayesQR | Bayesian Quantile Regression |
| bayesreg | Bayesian Regression Models with Global-Local Shrinkage Priors |
| Bayesrel | Bayesian Reliability Estimation |
| BayesReversePLLH | Fits the Bayesian Piecewise Linear Log-Hazard Model |
| BayesRS | Bayes Factors for Hierarchical Linear Models with Continuous Predictors |
| bayess | Bayesian Essentials with R |
| BayesS5 | Bayesian Variable Selection Using Simplified Shotgun Stochastic Search with Screening (S5) |
| BayesSAE | Bayesian Analysis of Small Area Estimation |
| BayesSampling | Bayes Linear Estimators for Finite Population |
| BayesSenMC | Different Models of Posterior Distributions of Adjusted Odds Ratio |
| BayesSpec | Bayesian Spectral Analysis Techniques |
| BayesSPsurv | Bayesian Spatial Split Population Survival Model |
| BayesSUR | Bayesian Seemingly Unrelated Regression |
| bayesSurv | Bayesian Survival Regression with Flexible Error and Random Effects Distributions |
| BayesSurvival | Bayesian Survival Analysis for Right Censored Data |
| bayest | Effect Size Targeted Bayesian Two-Sample t-Tests via Markov Chain Monte Carlo in Gaussian Mixture Models |
| bayestestR | Understand and Describe Bayesian Models and Posterior Distributions |
| bayesTFR | Bayesian Fertility Projection |
| BayesTree | Bayesian Additive Regression Trees |
| BayesTreePrior | Bayesian Tree Prior Simulation |
| BayesTwin | Bayesian Analysis of Item-Level Twin Data |
| BayesValidate | BayesValidate Package |
| BayesVarSel | Bayes Factors, Model Choice and Variable Selection in Linear Models |
| bayesvl | Visually Learning the Graphical Structure of Bayesian Networks and Performing MCMC with 'Stan' |
| BayesX | R Utilities Accompanying the Software Package BayesX |
| BayesXsrc | R Package Distribution of the BayesX C++ Sources |
| bayfoxr | Global Bayesian Foraminifera Core Top Calibration |
| BayHaz | R Functions for Bayesian Hazard Rate Estimation |
| BayLum | Chronological Bayesian Models Integrating Optically Stimulated Luminescence and Radiocarbon Age Dating |
| baymedr | Computation of Bayes Factors for Common Biomedical Designs |
| BaySIC | Bayesian Analysis of Significantly Mutated Genes in Cancer |
| baystability | Bayesian Stability Analysis of Genotype by Environment Interaction (GEI) |
| BAYSTAR | On Bayesian analysis of Threshold autoregressive model (BAYSTAR) |
| baytrends | Long Term Water Quality Trend Analysis |
| bazar | Miscellaneous Basic Functions |
| BB | Solving and Optimizing Large-Scale Nonlinear Systems |
| BBcor | Bayesian Bootstrapping Correlations |
| bbefkr | Bayesian bandwidth estimation and semi-metric selection for the functional kernel regression with unknown error density |
| bbemkr | Bayesian bandwidth estimation for multivariate kernel regression with Gaussian error |
| BBEST | Bayesian Estimation of Incoherent Neutron Scattering Backgrounds |
| BBI | Benthic Biotic Indices Calculation from Composition Data |
| bbl | Boltzmann Bayes Learner |
| BBmisc | Miscellaneous Helper Functions for B. Bischl |
| bbmle | Tools for General Maximum Likelihood Estimation |
| BBMM | Brownian bridge movement model |
| BBMV | Models for Continuous Traits Evolving in Macroevolutionary Landscapes of any Shape |
| bbo | Biogeography-Based Optimization |
| bbotk | Black-Box Optimization Toolkit |
| BBRecapture | Bayesian Behavioural Capture-Recapture Models |
| bbreg | Bessel and Beta Regressions via Expectation-Maximization Algorithm for Continuous Bounded Data |
| bbricks | Bayesian Methods and Graphical Model Structures for Statistical Modeling |
| bbsBayes | Hierarchical Bayesian Analysis of North American BBS Data |
| bbw | Blocked Weighted Bootstrap |
| bc3net | Gene Regulatory Network Inference with Bc3net |
| BCA | Business and Customer Analytics |
| BCA1SG | Block Coordinate Ascent with One-Step Generalized Rosen Algorithm |
| bcaboot | Bias Corrected Bootstrap Confidence Intervals |
| BCBCSF | Bias-Corrected Bayesian Classification with Selected Features |
| bcc | Beta Control Charts |
| BCC1997 | Calculation of Option Prices Based on a Universal Solution |
| bccp | Bias Correction under Censoring Plan |
| bcdata | Search and Retrieve Data from the BC Data Catalogue |
| BCDating | Business Cycle Dating and Plotting Tools |
| BcDiag | Diagnostics Plots for Bicluster Data |
| BCE | Bayesian composition estimator: estimating sample (taxonomic) composition from biomarker data |
| BCEA | Bayesian Cost Effectiveness Analysis |
| BCEE | The Bayesian Causal Effect Estimation Algorithm |
| BCellMA | B Cell Receptor Somatic Hyper Mutation Analysis |
| bcf | Causal Inference for a Binary Treatment and Continuous Outcome using Bayesian Causal Forests |
| bcfrailph | Semiparametric Bivariate Correlated Frailty Model |
| bcfrailphdv | Bivariate Correlated Frailty Models with Varied Variances |
| bcgam | Bayesian Constrained Generalised Linear Models |
| BCgee | Bias-Corrected Estimates for Generalized Linear Models for Dependent Data |
| BCHM | Clinical Trial Calculation Based on BCHM Design |
| Bchron | Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase Modelling |
| BClustLonG | A Dirichlet Process Mixture Model for Clustering Longitudinal Gene Expression Data |
| bcmaps | Map Layers and Spatial Utilities for British Columbia |
| bcmixed | Mixed Effect Model with the Box-Cox Transformation |
| bcp | Bayesian Analysis of Change Point Problems |
| bcpa | Behavioral change point analysis of animal movement |
| bcpmeta | Bayesian Multiple Changepoint Detection Using Metadata |
| bcr | Extract Moroccan Financial Data |
| BCRA | Breast Cancer Risk Assessment |
| bcrm | Bayesian Continual Reassessment Method for Phase I Dose-Escalation Trials |
| bcROCsurface | Bias-Corrected Methods for Estimating the ROC Surface of Continuous Diagnostic Tests |
| bcrypt | 'Blowfish' Password Hashing Algorithm |
| BCSub | A Bayesian Semiparametric Factor Analysis Model for Subtype Identification (Clustering) |
| BCT | Bayesian Context Trees for Discrete Time Series |
| bcTSNE | Projected t-SNE for Batch Correction |
| bda | Binned Data Analysis |
| bdchecks | Biodiversity Data Checks |
| bdclean | A User-Friendly Biodiversity Data Cleaning App for the Inexperienced R User |
| bdDwC | Darwinizer: Darwin Core (DwC) Field Names Standardization |
| bde | Bounded Density Estimation |
| BDEsize | Efficient Determination of Sample Size in Balanced Design of Experiments |
| BDgraph | Bayesian Structure Learning in Graphical Models using Birth-Death MCMC |
| bdlp | Transparent and Reproducible Artificial Data Generation |
| BDP2 | Bayesian Adaptive Designs for Phase II Trials with Binary Endpoint |
| bdpar | Big Data Preprocessing Architecture |
| bdpopt | Optimisation of Bayesian Decision Problems |
| bdpv | Inference and Design for Predictive Values in Diagnostic Tests |
| bdribs | Bayesian Detection of Potential Risk Using Inference on Blinded Safety Data |
| bdscale | Remove Weekends and Holidays from ggplot2 Axes |
| bdsmatrix | Routines for Block Diagonal Symmetric Matrices |
| bdvis | Biodiversity Data Visualizations |
| BDWreg | Bayesian Inference for Discrete Weibull Regression |
| bdynsys | Bayesian Dynamical System Model |
| BE | Bioequivalence Study Data Analysis |
| bea.R | Bureau of Economic Analysis API |
| BEACH | Biometric Exploratory Analysis Creation House |
| beadarrayFilter | Bead filtering for Illumina bead arrays |
| beadplexr | Analysis of Multiplex Cytometric Bead Assays |
| beakr | A Minimalist Web Framework for R |
| beam | Fast Bayesian Inference in Large Gaussian Graphical Models |
| beanplot | Visualization via Beanplots (like Boxplot/Stripchart/Violin Plot) |
| beanz | Bayesian Analysis of Heterogeneous Treatment Effect |
| beast | Bayesian Estimation of Change-Points in the Slope of Multivariate Time-Series |
| beastier | Call 'BEAST2' |
| BeastJar | JAR Dependency for MCMC Using 'BEAST' |
| beautier | 'BEAUti' from R |
| BED | Biological Entity Dictionary (BED) |
| BEDASSLE | Quantifies effects of geo/eco distance on genetic differentiation |
| BEDMatrix | Extract Genotypes from a PLINK .bed File |
| bedr | Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix' |
| beepr | Easily Play Notification Sounds on any Platform |
| beeswarm | The Bee Swarm Plot, an Alternative to Stripchart |
| beezdemand | Behavioral Economic Easy Demand |
| befproj | Makes a Local Population Projection |
| beginr | Functions for R Beginners |
| behaviorchange | Tools for Behavior Change Researchers and Professionals |
| behavr | Canonical Data Structure for Behavioural Data |
| belex | Download Historical Data from the Belgrade Stock Exchange |
| belg | Boltzmann Entropy of a Landscape Gradient |
| bellreg | Count Regression Models Based on the Bell Distribution |
| bench | High Precision Timing of R Expressions |
| benchden | 28 benchmark densities from Berlinet/Devroye (1994) |
| Benchmarking | Benchmark and Frontier Analysis Using DEA and SFA |
| benchmarkme | Crowd Sourced System Benchmarks |
| benchmarkmeData | Data Set for the 'benchmarkme' Package |
| benchr | High Precise Measurement of R Expressions Execution Time |
| bender | Bender Client |
| benford | Benford's Analysis on Large Data Sets |
| benford.analysis | Benford Analysis for Data Validation and Forensic Analytics |
| BenfordTests | Statistical Tests for Evaluating Conformity to Benford's Law |
| BENMMI | Benthic Multi-Metric Index |
| bentcableAR | Bent-Cable Regression for Independent Data or Autoregressive Time Series |
| benthos | Marine Benthic Ecosystem Analysis |
| Bergm | Bayesian Exponential Random Graph Models |
| berryFunctions | Function Collection Related to Plotting and Hydrology |
| BeSS | Best Subset Selection /Ridge Regression in Linear, Logistic, Poisson and CoxPH Models |
| Bessel | Computations and Approximations for Bessel Functions |
| BEST | Bayesian Estimation Supersedes the t-Test |
| bestglm | Best Subset GLM and Regression Utilities |
| Bestie | Bayesian Estimation of Intervention Effects |
| bestNormalize | Normalizing Transformation Functions |
| BESTree | Branch-Exclusive Splits Trees |
| bestridge | Best Subset Ridge Regression in Linear, Logistic, Poisson and CoxPH Models |
| bestSDP | Burden Estimate of Common Communicable Diseases in Settlements of Displaced Populations |
| BET | Binary Expansion Testing |
| BetaBit | Mini Games from Adventures of Beta and Bit |
| betaboost | Boosting Beta Regression |
| betacal | Beta Calibration |
| betafam | Detecting rare variants for quantitative traits using nuclear families |
| betafunctions | Functions for Working with Two- And Four-Parameter Beta Probability Distributions |
| betalink | Beta-Diversity of Species Interactions |
| betapart | Partitioning Beta Diversity into Turnover and Nestedness Components |
| BetaPASS | Calculate Power and Sample Size with Beta Regression |
| betaper | Taxonomic Uncertainty on Multivariate Analyses of Ecological Data |
| betareg | Beta Regression |
| betategarch | Simulation, Estimation and Forecasting of Beta-Skew-t-EGARCH Models |
| bethel | Bethel's algorithm |
| BETS | Brazilian Economic Time Series |
| bets.covid19 | The BETS Model for Early Epidemic Data |
| BeviMed | Bayesian Evaluation of Variant Involvement in Mendelian Disease |
| BeyondBenford | Compare the Goodness of Fit of Benford's and Blondeau Da Silva's Digit Distributions to a Given Dataset |
| beyondWhittle | Bayesian Spectral Inference for Stationary Time Series |
| bezier | Toolkit for Bezier Curves and Splines |
| bfast | Breaks For Additive Season and Trend (BFAST) |
| bfp | Bayesian Fractional Polynomials |
| BFpack | Flexible Bayes Factor Testing of Scientific Expectations |
| BFS | Search and Download Data from the Swiss Federal Statistical Office (BFS) |
| bfsl | Best-Fit Straight Line |
| bfsMaps | Plot Maps from Switzerland by Swiss Federal Statistical Office |
| bfw | Bayesian Framework for Computational Modeling |
| BGData | A Suite of Packages for Analysis of Big Genomic Data |
| bgeva | Binary Generalized Extreme Value Additive Models |
| bggAnalytics | BoardGameGeek's Board Game Data Analysis Tools |
| BGGE | Bayesian Genomic Linear Models Applied to GE Genome Selection |
| BGGM | Bayesian Gaussian Graphical Models |
| bggum | Bayesian Estimation of Generalized Graded Unfolding Model Parameters |
| BGLR | Bayesian Generalized Linear Regression |
| bgmfiles | Example BGM Files for the Atlantis Ecosystem Model |
| BGmisc | Behavior Genetic Modeling Functions |
| bgmm | Gaussian Mixture Modeling Algorithms and the Belief-Based Mixture Modeling |
| BGPhazard | Markov Beta and Gamma Processes for Modeling Hazard Rates |
| BGSIMD | Block Gibbs Sampler with Incomplete Multinomial Distribution |
| bgsmtr | Bayesian Group Sparse Multi-Task Regression |
| BGVAR | Bayesian Global Vector Autoregressions |
| BH | Boost C++ Header Files |
| BHAI | Estimate the Burden of Healthcare-Associated Infections |
| Bhat | General likelihood exploration |
| BHH2 | Useful Functions for Box, Hunter and Hunter II |
| bhm | Biomarker Threshold Models |
| bhmbasket | Bayesian Hierarchical Models for Basket Trials |
| BHMSMAfMRI | Bayesian Hierarchical Multi-Subject Multiscale Analysis of Functional MRI Data |
| bhpm | Bayesian Hierarchical Poisson Models for Multiple Grouped Outcomes with Clustering |
| BHSBVAR | Structural Bayesian Vector Autoregression Models |
| BHTSpack | Bayesian Multi-Plate High-Throughput Screening of Compounds |
| biasbetareg | Bias correction of the parameter estimates of the beta regression model |
| BiasCorrector | A GUI to Correct Measurement Bias in DNA Methylation Analyses |
| BiasedUrn | Biased Urn Model Distributions |
| bib2df | Parse a BibTeX File to a Data Frame |
| BiBitR | R Wrapper for Java Implementation of BiBit |
| bibliometrix | Comprehensive Science Mapping Analysis |
| bibliometrixData | Bibliometrix Example Datasets |
| BibPlots | Plot Functions for Use in Bibliometrics |
| bibtex | Bibtex Parser |
| biclique | Maximal Biclique Enumeration in Bipartite Graphs |
| biclust | BiCluster Algorithms |
| biclustermd | Biclustering with Missing Data |
| BICORN | Integrative Inference of De Novo Cis-Regulatory Modules |
| BiDAG | Bayesian Inference for Directed Acyclic Graphs |
| BiDimRegression | Calculates the Bidimensional Regression Between Two 2D Configurations |
| BIEN | Tools for Accessing the Botanical Information and Ecology Network Database |
| bife | Binary Choice Models with Fixed Effects |
| BIFIEsurvey | Tools for Survey Statistics in Educational Assessment |
| bifurcatingr | Bifurcating Autoregressive Models |
| biganalytics | Utilities for 'big.matrix' Objects from Package 'bigmemory' |
| bigassertr | Assertion and Message Functions |
| bigchess | Read, Write, Manipulate, Explore Chess PGN Files and R API to UCI Chess Engines |
| bigdatadist | Distances for Machine Learning and Statistics in the Context of Big Data |
| BIGDAWG | Case-Control Analysis of Multi-Allelic Loci |
| bigdist | Store Distance Matrices on Disk |
| bigGP | Distributed Gaussian Process Calculations |
| BIGL | Biochemically Intuitive Generalized Loewe Model |
| biglasso | Extending Lasso Model Fitting to Big Data |
| bigleaf | Physical and Physiological Ecosystem Properties from Eddy Covariance Data |
| biglm | Bounded Memory Linear and Generalized Linear Models |
| biglmm | Bounded Memory Linear and Generalized Linear Models |
| bigMap | Big Data Mapping |
| bigmatch | Making Optimal Matching Size-Scalable Using Optimal Calipers |
| bigmds | Multidimensional Scaling for Big Data |
| bigmemory | Manage Massive Matrices with Shared Memory and Memory-Mapped Files |
| bigmemory.sri | A shared resource interface for Bigmemory Project packages |
| bigparallelr | Easy Parallel Tools |
| bigQueryR | Interface with Google BigQuery with Shiny Compatibility |
| BigQuic | Big Quadratic Inverse Covariance Estimation |
| bigreadr | Read Large Text Files |
| bigReg | Generalized Linear Models (GLM) for Large Data Sets |
| bigrquery | An Interface to Google's 'BigQuery' 'API' |
| bigsnpr | Analysis of Massive SNP Arrays |
| bigsparser | Sparse Matrix Format with Data on Disk |
| bigsplines | Smoothing Splines for Large Samples |
| bigstatsr | Statistical Tools for Filebacked Big Matrices |
| bigstep | Stepwise Selection for Large Data Sets |
| bigSurvSGD | Big Survival Analysis Using Stochastic Gradient Descent |
| bigtabulate | Table, Apply, and Split Functionality for Matrix and 'big.matrix' Objects |
| bigtcr | Nonparametric Analysis of Bivariate Gap Time with Competing Risks |
| bigtime | Sparse Estimation of Large Time Series Models |
| BigTSP | Top Scoring Pair based methods for classification |
| bigutilsr | Utility Functions for Large-scale Data |
| BigVAR | Dimension Reduction Methods for Multivariate Time Series |
| bikeshare14 | Bay Area Bike Share Trips in 2014 |
| bikm1 | Co-Clustering Adjusted Rand Index and Bikm1 Procedure for Contingency and Binary Data-Sets |
| bild | A Package for BInary Longitudinal Data |
| billboard | Contains Data of Billboard Hot 100 Songs |
| billboarder | Create Interactive Chart with the JavaScript 'Billboard' Library |
| bimetallic | Power for SNP analyses using silver standard cases |
| bimets | Time Series and Econometric Modeling |
| bimixt | Estimates Mixture Models for Case-Control Data |
| BimodalIndex | The Bimodality Index |
| Binarize | Binarization of One-Dimensional Data |
| BinarybalancedCut | Threshold Cut Point of Probability for a Binary Classifier Model |
| BinaryDosage | Creates, Merges, and Reads Binary Dosage Files |
| BinaryEMVS | Variable Selection for Binary Data Using the EM Algorithm |
| BinaryEPPM | Mean and Variance Modeling of Binary Data |
| binaryGP | Fit and Predict a Gaussian Process Model with (Time-Series) Binary Response |
| binaryLogic | Binary Logic |
| binb | 'binb' is not 'Beamer' |
| BINCOR | Estimate the Correlation Between Two Irregular Time Series |
| binda | Multi-Class Discriminant Analysis using Binary Predictors |
| bindata | Generation of Artificial Binary Data |
| bindr | Parametrized Active Bindings |
| bindrcpp | An 'Rcpp' Interface to Active Bindings |
| binequality | Methods for Analyzing Binned Income Data |
| binford | Binford's Hunter-Gatherer Data |
| bingat | Binary Graph Analysis Tools |
| binGroup | Evaluation and Experimental Design for Binomial Group Testing |
| binGroup2 | Identification and Estimation using Group Testing |
| BinGSD | Calculation for Single Arm Group Sequential Test with Binary Endpoint |
| binhf | Haar-Fisz Functions for Binomial Data |
| binman | A Binary Download Manager |
| BinMat | Processes Binary Data Obtained from Fragment Analysis |
| binMto | Many-to-One Comparisons of Proportions |
| binnednp | Nonparametric Estimation for Interval-Grouped Data |
| BinNonNor | Data Generation with Binary and Continuous Non-Normal Components |
| BinNor | Simultaneous Generation of Multivariate Binary and Normal Variates |
| binom | Binomial Confidence Intervals For Several Parameterizations |
| binomialcftp | Generates binomial random numbers via the coupling from the past algorithm |
| binomialMix | Mixture Models for Binomial and Longitudinal Data |
| binomialRF | Binomial Random Forest Feature Selection |
| binomlogit | Efficient MCMC for Binomial Logit Models |
| binomSamSize | Confidence Intervals and Sample Size Determination for a Binomial Proportion under Simple Random Sampling and Pooled Sampling |
| BinOrdNonNor | Concurrent Generation of Binary, Ordinal and Continuous Data |
| binovisualfields | Depth-Dependent Binocular Visual Fields Simulation |
| BinQuasi | Analyzing Replicated ChIP Sequencing Data Using Quasi-Likelihood |
| binr | Cut Numeric Values into Evenly Distributed Groups |
| BinSegBstrap | Piecewise Smooth Regression by Bootstrapped Binary Segmentation |
| binsegRcpp | Efficient Implementation of Binary Segmentation |
| binseqtest | Exact Binary Sequential Designs and Analysis |
| binsmooth | Generate PDFs and CDFs from Binned Data |
| binsreg | Binscatter Estimation and Inference |
| binst | Data Preprocessing, Binning for Classification and Regression |
| bio.infer | Predict Environmental Conditions from Biological Observations |
| bio3d | Biological Structure Analysis |
| bioacoustics | Analyse Audio Recordings and Automatically Extract Animal Vocalizations |
| bioassays | Summarising Multi Well Plate Cellular Assay |
| bioC.logs | BioConductor Package Downloads Stats |
| BioCircos | Interactive Circular Visualization of Genomic Data using 'htmlwidgets' and 'BioCircos.js' |
| BiocManager | Access the Bioconductor Project Package Repository |
| Biocomb | Feature Selection and Classification with the Embedded Validation Procedures for Biomedical Data Analysis |
| biocompute | Create and Manipulate BioCompute Objects |
| Biodem | Biodemography Functions |
| BiodiversityR | Package for Community Ecology and Suitability Analysis |
| BIOdry | Multilevel Modeling of Dendroclimatical Fluctuations |
| BioFTF | Biodiversity Assessment Using Functional Tools |
| biogas | Process Biogas Data and Predict Biogas Production |
| biogeo | Point Data Quality Assessment and Coordinate Conversion |
| biogram | N-Gram Analysis of Biological Sequences |
| biogrowth | Modelling of Population Growth |
| Bioi | Biological Image Analysis |
| bioimagetools | Tools for Microscopy Imaging |
| bioinactivation | Mathematical Modelling of (Dynamic) Microbial Inactivation |
| BioInsight | Filter and Plot RNA Biotypes |
| biolink | Create Hyperlinks to Biological Databases and Resources |
| Biolinv | Modelling and Forecasting Biological Invasions |
| BIOM.utils | Utilities for the BIOM (Biological Observation Matrix) Format |
| BioMark | Find Biomarkers in Two-Class Discrimination Problems |
| biomartr | Genomic Data Retrieval |
| BIOMASS | Estimating Aboveground Biomass and Its Uncertainty in Tropical Forests |
| BioMedR | Generating Various Molecular Representations for Chemicals, Proteins, DNAs, RNAs and Their Interactions |
| biomod2 | Ensemble Platform for Species Distribution Modeling |
| bionetdata | Biological and chemical data networks |
| bioOED | Sensitivity Analysis and Optimum Experiment Design for Microbial Inactivation |
| Biopeak | Identification of Impulse-Like Gene Expression Changes in Short Genomic Series Data |
| BioPET | Biomarker Prognostic Enrichment Tool |
| BioPETsurv | Biomarker Prognostic Enrichment Tool for Time-to-Event Trial |
| bioPN | Simulation of deterministic and stochastic biochemical reaction networks using Petri Nets |
| BioProbability | Probability in Biostatistics |
| bioRad | Biological Analysis and Visualization of Weather Radar Data |
| biorxivr | Search and Download Papers from the bioRxiv Preprint Server |
| Bios2cor | From Biological Sequences and Simulations to Correlation Analysis |
| bios2mds | From Biological Sequences to Multidimensional Scaling |
| bioseq | A Toolbox for Manipulating Biological Sequences |
| bioset | Convert a Matrix of Raw Values into Nice and Tidy Data |
| biosignalEMG | Tools for Electromyogram Signals (EMG) Analysis |
| biospear | Biomarker Selection in Penalized Regression Models |
| biostat3 | Utility Functions, Datasets and Extended Examples for Survival Analysis |
| Biostatistics | Statistics Tutorials for Biologists |
| BioStatR | Initiation à La Statistique Avec R |
| Biotech | Diverse Applications for Biotechnology |
| biotic | Calculation of Freshwater Biotic Indices |
| biotools | Tools for Biometry and Applied Statistics in Agricultural Science |
| BioVenn | Create Area-Proportional Venn Diagrams from Biological Lists |
| bipartite | Visualising Bipartite Networks and Calculating Some (Ecological) Indices |
| bipartiteD3 | Interactive Bipartite Graphs |
| biplotbootGUI | Bootstrap on Classical Biplots and Clustering Disjoint Biplot |
| BiplotGUI | Interactive Biplots in R |
| BiProbitPartial | Bivariate Probit with Partial Observability |
| birankr | Ranking Nodes in Bipartite and Weighted Networks |
| birdring | Methods to Analyse Ring Re-Encounter Data |
| BIRDS | Biodiversity Information Review and Decision Support |
| birk | MA Birk's Functions |
| birtr | The R Package for "The Basics of Item Response Theory Using R" |
| BIS | Programmatic Access to Bank for International Settlements Data |
| biscale | Tools and Palettes for Bivariate Thematic Mapping |
| bisect | Estimating Cell Type Composition from Methylation Sequencing Data |
| bisectr | Tools to find bad commits with git bisect |
| BiSEp | Toolkit to Identify Candidate Synthetic Lethality |
| bisque | Approximate Bayesian Inference via Sparse Grid Quadrature Evaluation (BISQuE) for Hierarchical Models |
| BisqueRNA | Decomposition of Bulk Expression with Single-Cell Sequencing |
| BisRNA | Analysis of RNA Cytosine-5 Methylation |
| bit | Classes and Methods for Fast Memory-Efficient Boolean Selections |
| bit64 | A S3 Class for Vectors of 64bit Integers |
| bite | Bayesian Integrative Models of Trait Evolution |
| bitmexr | R Client for BitMEX |
| bitops | Bitwise Operations |
| BiTrinA | Binarization and Trinarization of One-Dimensional Data |
| bitsqueezr | Quantize Floating-Point Numbers for Improved Compressibility |
| biva | Business Intelligence |
| bivariate | Bivariate Probability Distributions |
| Bivariate.Pareto | Bivariate Pareto Models |
| BivarP | Estimating the Parameters of Some Bivariate Distributions |
| BivGeo | Basu-Dhar Bivariate Geometric Distribution |
| bivgeom | Roy's Bivariate Geometric Distribution |
| bivquant | Estimation of Bivariate Quantiles |
| BivRec | Bivariate Alternating Recurrent Event Data Analysis |
| BivRegBLS | Tolerance Interval and EIV Regression - Method Comparison Studies |
| bivrp | Bivariate Residual Plots with Simulation Polygons |
| BivUnifBin | Generation of Bivariate Uniform Data and Its Relation to Bivariate Binary Data |
| biwavelet | Conduct Univariate and Bivariate Wavelet Analyses |
| biwt | Functions to compute the biweight mean vector and covariance & correlation matrices |
| bizdays | Business Days Calculations and Utilities |
| bjscrapeR | An API Wrapper for the Bureau of Justice Statistics (BJS) |
| bkmr | Bayesian Kernel Machine Regression |
| bkmrhat | Parallel Chain Tools for Bayesian Kernel Machine Regression |
| BKPC | Bayesian Kernel Projection Classifier |
| blackbox | Black Box Optimization and Exploration of Parameter Space |
| BlackCarbon | Processing Raw Black Carbon Concentration |
| blaise | Read and Write FWF Files in the Blaise Format |
| BlakerCI | Blaker's Binomial and Poisson Confidence Limits |
| BlandAltmanLeh | Plots (Slightly Extended) Bland-Altman Plots |
| blandr | Bland-Altman Method Comparison |
| blapsr | Bayesian Inference with Laplace Approximations and P-Splines |
| blastula | Easily Send HTML Email Messages |
| blatent | Bayesian Latent Variable Models |
| blatr | Send Emails Using 'Blat' for Windows |
| Blaunet | Calculate and Analyze Blau Status for (Covert) Organizations |
| blavaan | Bayesian Latent Variable Analysis |
| BLCOP | Black-Litterman and Copula Opinion Pooling Frameworks |
| blendedLink | A New Link Function that Blends Two Specified Link Functions |
| blender | Analyze biotic homogenization of landscapes |
| Blendstat | Joint Analysis of Experiments with Mixtures and Random Effects |
| blin | Bipartite Longitudinal Influence Network (BLIN) Estimation |
| blindrecalc | Blinded Sample Size Recalculation |
| blink | Record Linkage for Empirically Motivated Priors |
| blm | Binomial linear and linear-expit regression |
| blme | Bayesian Linear Mixed-Effects Models |
| blmeco | Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan" |
| BLModel | Black-Litterman Posterior Distribution |
| blob | A Simple S3 Class for Representing Vectors of Binary Data ('BLOBS') |
| blockcluster | Co-Clustering Package for Binary, Categorical, Contingency and Continuous Data-Sets |
| BlockCov | Estimation of Large Block Covariance Matrices |
| blockCV | Spatial and Environmental Blocking for K-Fold Cross-Validation |
| BlockFeST | Bayesian Calculation of Region-Specific Fixation Index to Detect Local Adaptation |
| blockForest | Block Forests: Random Forests for Blocks of Clinical and Omics Covariate Data |
| blockmatrix | blockmatrix: Tools to solve algebraic systems with partitioned matrices |
| BlockMessage | Creates strings that show a text message in 8 by 8 block letters |
| blockmodeling | Generalized and Classical Blockmodeling of Valued Networks |
| blockmodels | Latent and Stochastic Block Model Estimation by a 'V-EM' Algorithm |
| blockrand | Randomization for Block Random Clinical Trials |
| blockRAR | Block Design for Response-Adaptive Randomization |
| blocksdesign | Nested and Crossed Block Designs for Factorial and Unstructured Treatment Sets |
| blockTools | Block, Assign, and Diagnose Potential Interference in Randomized Experiments |
| blogdown | Create Blogs and Websites with R Markdown |
| BLOQ | Impute and Analyze Data with BLOQ Observations |
| blorr | Tools for Developing Binary Logistic Regression Models |
| BLPestimatoR | Performs a BLP Demand Estimation |
| BLR | Bayesian Linear Regression |
| blrm | Dose Escalation Design in Phase I Oncology Trial Using Bayesian Logistic Regression Modeling |
| BLRPM | Stochastic Rainfall Generator Bartlett-Lewis Rectangular Pulse Model |
| BLRShiny | Interactive Document for Working with Binary Logistic Regression Analysis |
| BLRShiny2 | Interactive Document for Working with Binary Logistic Regression Analysis |
| blsAPI | Request Data from the U.S. Bureau of Labor Statistics API |
| blscrapeR | An API Wrapper for the Bureau of Labor Statistics (BLS) |
| BLSM | Bayesian Latent Space Model |
| bltm | Bayesian Latent Threshold Modeling |
| BlythStillCasellaCI | Blyth-Still-Casella Exact Binomial Confidence Intervals |
| BMA | Bayesian Model Averaging |
| bmabasket | Bayesian Model Averaging for Basket Trials |
| BMAmevt | Multivariate Extremes: Bayesian Estimation of the Spectral Measure |
| bmass | Bayesian Multivariate Analysis of Summary Statistics |
| bmd | Benchmark dose analysis for dose-response data |
| bmem | Mediation Analysis with Missing Data Using Bootstrap |
| bmeta | Bayesian Meta-Analysis and Meta-Regression |
| bmgarch | Bayesian Multivariate GARCH Models |
| BMisc | Miscellaneous Functions for Panel Data, Quantiles, and Printing Results |
| Bmix | Bayesian Sampling for Stick-Breaking Mixtures |
| bmixture | Bayesian Estimation for Finite Mixture of Distributions |
| bmk | MCMC diagnostics package |
| bmlm | Bayesian Multilevel Mediation |
| bmmix | Bayesian multinomial mixture |
| bmotif | Motif Analyses of Bipartite Networks |
| bmp | Read Windows Bitmap (BMP) Images |
| BMRBr | 'BMRB' File Downloader |
| bmrm | Bundle Methods for Regularized Risk Minimization Package |
| BMRSr | Wrapper Functions to the 'BMRS API' |
| BMRV | Bayesian Models for Rare Variant Association Analysis |
| BMS | Bayesian Model Averaging Library |
| bmscstan | Bayesian Multilevel Single Case Models using 'Stan' |
| BMT | The BMT Distribution |
| BMTAR | Bayesian Approach for MTAR Models with Missing Data |
| BMTME | Bayesian Multi-Trait Multi-Environment for Genomic Selection Analysis |
| bnclassify | Learning Discrete Bayesian Network Classifiers from Data |
| BNDataGenerator | Data Generator based on Bayesian Network Model |
| bnlearn | Bayesian Network Structure Learning, Parameter Learning and Inference |
| bnma | Bayesian Network Meta-Analysis using 'JAGS' |
| bnmonitor | An Implementation of Sensitivity Analysis in Bayesian Networks |
| BNN | Bayesian Neural Network for High-Dimensional Nonlinear Variable Selection |
| bnnSurvival | Bagged k-Nearest Neighbors Survival Prediction |
| bnormnlr | Bayesian Estimation for Normal Heteroscedastic Nonlinear Regression Models |
| bnpa | Bayesian Networks & Path Analysis |
| BNPdensity | Ferguson-Klass Type Algorithm for Posterior Normalized Random Measures |
| BNPmix | Bayesian Nonparametric Mixture Models |
| BNPMIXcluster | Bayesian Nonparametric Model for Clustering with Mixed Scale Variables |
| bnpmr | Bayesian Monotonic Nonparametric Regression |
| bnpsd | Simulate Genotypes from the BN-PSD Admixture Model |
| BNPTSclust | A Bayesian Nonparametric Algorithm for Time Series Clustering |
| BNrich | Pathway Enrichment Analysis Based on Bayesian Network |
| BNSL | Bayesian Network Structure Learning |
| BNSP | Bayesian Non- And Semi-Parametric Model Fitting |
| bnspatial | Spatial Implementation of Bayesian Networks and Mapping |
| bnstruct | Bayesian Network Structure Learning from Data with Missing Values |
| bnviewer | Bayesian Networks Interactive Visualization and Explainable Artificial Intelligence |
| boa | Bayesian Output Analysis Program (BOA) for MCMC |
| BoardGames | Board Games and Tools for Building Board Games |
| bodenmiller | Profilling of Peripheral Blood Mononuclear Cells using CyTOF |
| BOG | Bacterium and Virus Analysis of Orthologous Groups (BOG) is a Package for Identifying Differentially Regulated Genes in the Light of Gene Functions |
| boilerpipeR | Interface to the Boilerpipe Java Library |
| BOIN | Bayesian Optimal INterval (BOIN) Design for Single-Agent and Drug- Combination Phase I Clinical Trials |
| BOJ | Interface to Bank of Japan Statistics |
| bold | Interface to Bold Systems API |
| Bolstad | Functions for Elementary Bayesian Inference |
| Bolstad2 | Bolstad functions |
| BoltzMM | Boltzmann Machines with MM Algorithms |
| bomrang | Australian Government Bureau of Meteorology ('BOM') Data Client |
| BondValuation | Fixed Coupon Bond Valuation Allowing for Odd Coupon Periods and Various Day Count Conventions |
| BonEV | An Improved Multiple Testing Procedure for Controlling False Discovery Rates |
| bookdown | Authoring Books and Technical Documents with R Markdown |
| bookdownplus | Generate Assorted Books and Documents with R 'bookdown' Package |
| BoolFilter | Optimal Estimation of Partially Observed Boolean Dynamical Systems |
| BoolNet | Construction, Simulation and Analysis of Boolean Networks |
| Boom | Bayesian Object Oriented Modeling |
| BoomSpikeSlab | MCMC for Spike and Slab Regression |
| BoostMLR | Boosting for Multivariate Longitudinal Response |
| boostmtree | Boosted Multivariate Trees for Longitudinal Data |
| boostr | A modular framework to bag or boost any estimation procedure |
| boot | Bootstrap Functions (Originally by Angelo Canty for S) |
| boot.heterogeneity | A Bootstrap-Based Heterogeneity Test for Meta-Analysis |
| bootComb | Combine Parameter Estimates via Parametric Bootstrap |
| bootES | Bootstrap Effect Sizes |
| bootImpute | Bootstrap Inference for Multiple Imputation |
| bootLR | Bootstrapped Confidence Intervals for (Negative) Likelihood Ratio Tests |
| BootMRMR | Bootstrap-MRMR Technique for Informative Gene Selection |
| bootnet | Bootstrap Methods for Various Network Estimation Routines |
| BootPR | Bootstrap Prediction Intervals and Bias-Corrected Forecasting |
| bootruin | A Bootstrap Test for the Probability of Ruin in the Classical Risk Process |
| bootspecdens | Testing equality of spectral densities |
| bootsPLS | Bootstrap Subsamplings of Sparse Partial Least Squares - Discriminant Analysis for Classification and Signature Identification |
| bootStepAIC | Bootstrap stepAIC |
| bootstrap | Functions for the Book "An Introduction to the Bootstrap" |
| bootstrapFP | Bootstrap Algorithms for Finite Population Inference |
| BootstrapQTL | Bootstrap cis-QTL Method that Corrects for the Winner's Curse |
| bootSVD | Fast, Exact Bootstrap Principal Component Analysis for High Dimensional Data |
| boottol | Bootstrap Tolerance Levels for Credit Scoring Validation Statistics |
| bootUR | Bootstrap Unit Root Tests |
| Boptbd | Bayesian Optimal Block Designs |
| bor | Transforming Behavioral Observation Records into Data Matrices |
| boral | Bayesian Ordination and Regression AnaLysis |
| borrowr | Estimate Causal Effects with Borrowing Between Data Sources |
| Boruta | Wrapper Algorithm for All Relevant Feature Selection |
| BoSSA | A Bunch of Structure and Sequence Analysis |
| BOSSreg | Best Orthogonalized Subset Selection (BOSS) |
| botor | 'AWS Python SDK' ('boto3') for R |
| boundingbox | Create a Bounding Box in an Image |
| boussinesq | Analytic Solutions for (ground-water) Boussinesq Equation |
| boutliers | Outlier Detection and Influence Diagnostics for Meta-Analysis |
| BoutrosLab.plotting.general | Functions to Create Publication-Quality Plots |
| box | Write Reusable, Composable and Modular R Code |
| boxcoxmix | Box-Cox-Type Transformations for Linear and Logistic Models with Random Effects |
| boxplotdbl | Double Box Plot for Two-Axes Correlation |
| boxr | Interface for the 'Box.com API' |
| bp | Blood Pressure Analysis in R |
| bpa | Basic Pattern Analysis |
| bpbounds | Nonparametric Bounds for the Average Causal Effect Due to Balke and Pearl and Extensions |
| bpca | Biplot of Multivariate Data Based on Principal Components Analysis |
| bpcp | Beta Product Confidence Procedure for Right Censored Data |
| bpcs | Bayesian Paired Comparison Analysis with Stan |
| bpDir | Boxplots for Directional Data |
| bPeaks | bPeaks: an intuitive peak-calling strategy to detect transcription factor binding sites from ChIP-seq data in small eukaryotic genomes |
| BPEC | Bayesian Phylogeographic and Ecological Clustering |
| bpgmm | Bayesian Model Selection Approach for Parsimonious Gaussian Mixture Models |
| BPM | Bayesian Purity Model to Estimate Tumor Purity |
| bpnreg | Bayesian Projected Normal Regression Models for Circular Data |
| bpp | Computations Around Bayesian Predictive Power |
| bqror | Bayesian Quantile Regression for Ordinal Models |
| bqtl | Bayesian QTL Mapping Toolkit |
| bRacatus | A Method to Estimate the Accuracy and Biogeographical Status of Georeferenced Biological Data |
| bracer | Brace Expansions |
| BradleyTerry2 | Bradley-Terry Models |
| braidReports | Visualize Combined Action Response Surfaces and Report BRAID Analyses |
| braidrm | Fitting Dose Response with the BRAID Combined Action Model |
| brainGraph | Graph Theory Analysis of Brain MRI Data |
| brainKCCA | Region-Level Connectivity Network Construction via Kernel Canonical Correlation Analysis |
| brainR | Helper Functions to 'misc3d' and 'rgl' Packages for Brain Imaging |
| Branching | Simulation and Estimation for Branching Processes |
| brandwatchR | 'Brandwatch' API to R |
| brant | Test for Parallel Regression Assumption |
| bravo | Bayesian Screening and Variable Selection |
| BRDT | Binomial Reliability Demonstration Tests |
| brea | Bayesian Recurrent Event Analysis |
| breakage | SICM pipette tip geometry estimation |
| breakDown | Model Agnostic Explainers for Individual Predictions |
| breakfast | Methods for Fast Multiple Change-Point Detection and Estimation |
| breakpoint | An R Package for Multiple Break-Point Detection via the Cross-Entropy Method |
| BreakPoints | Identify Breakpoints in Series of Data |
| breathtestcore | Core Functions to Read and Fit 13c Time Series from Breath Tests |
| breathteststan | Stan-Based Fit to Gastric Emptying Curves |
| bReeze | Functions for Wind Resource Assessment |
| BRETIGEA | Brain Cell Type Specific Gene Expression Analysis |
| brew | Templating Framework for Report Generation |
| brglm | Bias Reduction in Binomial-Response Generalized Linear Models |
| brglm2 | Bias Reduction in Generalized Linear Models |
| brickr | Emulate LEGO Bricks in 2D and 3D |
| bridgedist | An Implementation of the Bridge Distribution with Logit-Link as in Wang and Louis (2003) |
| bridger2 | Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data |
| bridgesampling | Bridge Sampling for Marginal Likelihoods and Bayes Factors |
| briKmeans | Package for Brik and Fabrik Algorithms to Initialise Kmeans |
| brinton | A Graphical EDA Tool |
| brio | Basic R Input Output |
| briqr | Interface to the 'Briq' API |
| BRISC | Fast Inference for Large Spatial Datasets using BRISC |
| briskaR | Biological Risk Assessment |
| BRL | Beta Record Linkage |
| brlrmr | Bias Reduction with Missing Binary Response |
| brm | Binary Regression Model |
| brms | Bayesian Regression Models using 'Stan' |
| brnn | Bayesian Regularization for Feed-Forward Neural Networks |
| Brobdingnag | Very Large Numbers in R |
| brokenstick | Broken Stick Model for Irregular Longitudinal Data |
| brolgar | Browse Over Longitudinal Data Graphically and Analytically in R |
| broman | Karl Broman's R Code |
| broom | Convert Statistical Objects into Tidy Tibbles |
| broom.helpers | Helpers for Model Coefficients Tibbles |
| broom.mixed | Tidying Methods for Mixed Models |
| broomExtra | Enhancements for 'broom' and 'easystats' Package Families |
| brotli | A Compression Format Optimized for the Web |
| BrownDog | Brown Dog R Interface |
| Brq | Bayesian Analysis of Quantile Regression Models |
| brr | Bayesian Inference on the Ratio of Two Poisson Rates |
| brranching | Fetch 'Phylogenies' from Many Sources |
| brt | Biological Relevance Testing |
| BRugs | Interface to the 'OpenBUGS' MCMC Software |
| Brundle | Normalisation Tools for Inter-Condition Variability of ChIP-Seq Data |
| brunnermunzel | (Permuted) Brunner-Munzel Test |
| brxx | Bayesian Test Reliability Estimation |
| bs4Dash | A 'Bootstrap 4' Version of 'shinydashboard' |
| BSagri | Safety Assessment in Agricultural Field Trials |
| bsam | Bayesian State-Space Models for Animal Movement |
| bsamGP | Bayesian Spectral Analysis Models using Gaussian Process Priors |
| BSBT | The Bayesian Spatial Bradley–Terry Model |
| bscaling | Variable Binary Scaling |
| BSDA | Basic Statistics and Data Analysis |
| bsearchtools | Binary Search Tools |
| bsem | Bayesian Structural Equation Models |
| BSGS | Bayesian Sparse Group Selection |
| BSGW | Bayesian Survival Model with Lasso Shrinkage Using Generalized Weibull Regression |
| bshazard | Nonparametric Smoothing of the Hazard Function |
| bSims | Bird Point Count Simulator |
| BSL | Bayesian Synthetic Likelihood |
| bslib | Custom 'Bootstrap' 'Sass' Themes for 'shiny' and 'rmarkdown' |
| BsMD | Bayes Screening and Model Discrimination |
| BSPADATA | Bayesian Proposal to Fit Spatial Econometric Models |
| bspec | Bayesian Spectral Inference |
| bsplinePsd | Bayesian Nonparametric Spectral Density Estimation Using B-Spline Priors |
| bsplus | Adds Functionality to the R Markdown + Shiny Bootstrap Framework |
| bspm | Bridge to System Package Manager |
| bspmma | Bayesian Semiparametric Models for Meta-Analysis |
| BSS | Brownian Semistationary Processes |
| BSSasymp | Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing Matrix Estimates |
| bssm | Bayesian Inference of Non-Linear and Non-Gaussian State Space Models |
| bssn | Birnbaum-Saunders Model |
| bst | Gradient Boosting |
| bsTools | Create HTML Content with Bootstrap 5 Classes and Layouts |
| bsts | Bayesian Structural Time Series |
| bsub | Submitter and Monitor of the 'LSF Cluster' |
| BSW | Fitting a Log-Binomial Model using the Bekhit-Schöpe-Wagenpfeil (BSW) Algorithm |
| btb | Beyond the Border - Kernel Density Estimation for Urban Geography |
| BTdecayLasso | Bradley-Terry Model with Exponential Time Decayed Log-Likelihood and Adaptive Lasso |
| btergm | Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood |
| BTLLasso | Modelling Heterogeneity in Paired Comparison Data |
| BTM | Biterm Topic Models for Short Text |
| BTSPAS | Bayesian Time-Stratified Population Analysis |
| BTYD | Implementing BTYD Models with the Log Sum Exp Patch |
| BTYDplus | Probabilistic Models for Assessing and Predicting your Customer Base |
| bubblyr | Beautiful Bubbles for 'shiny' and 'rmarkdown' Backgrounds |
| bucky | Bucky's Archive for Data Analysis in the Social Sciences |
| BUCSS | Bias and Uncertainty Corrected Sample Size |
| Buddle | A Deep Learning for Statistical Classification and Regression Analysis with Random Effects |
| buffeRs | Buffer Generation for Spatial Models |
| buildmer | Stepwise Elimination and Term Reordering for Mixed-Effects Regression |
| buildr | Organize & Run Build Scripts Comfortably |
| bujar | Buckley-James Regression for Survival Data with High-Dimensional Covariates |
| bulletcp | Automatic Groove Identification via Bayesian Changepoint Detection |
| bulletr | Algorithms for Matching Bullet Lands |
| BullsEyeR | Topic Modelling |
| bullwhipgame | Bullwhip Effect Demo in Shiny |
| bunching | Estimate Bunching |
| bunchr | Analyze Bunching in a Kink or Notch Setting |
| bundesbank | Download Data from Bundesbank |
| bundesligR | All Final Tables of the Bundesliga |
| bupaR | Business Process Analysis in R |
| burnr | Forest Fire History Analysis |
| BurStFin | Burns Statistics Financial |
| BurStMisc | Burns Statistics Miscellaneous |
| bursts | Markov model for bursty behavior in streams |
| busdater | Standard Date Calculations for Business |
| BusinessDuration | Calculates Business Duration Between Two Dates |
| butcher | Model Butcher |
| BuyseTest | Generalized Pairwise Comparisons |
| Bvalue | B-Value and Empirical Equivalence Bound |
| BVAR | Hierarchical Bayesian Vector Autoregression |
| bvarsv | Bayesian Analysis of a Vector Autoregressive Model with Stochastic Volatility and Time-Varying Parameters |
| bvartools | Bayesian Inference of Vector Autoregressive Models |
| BVARverse | Tidy Bayesian Vector Autoregression |
| bvenn | A Simple alternative to proportional Venn diagrams |
| bvls | The Stark-Parker algorithm for bounded-variable least squares |
| bvpSolve | Solvers for Boundary Value Problems of Differential Equations |
| BVSNLP | Bayesian Variable Selection in High Dimensional Settings using Nonlocal Priors |
| bwd | Backward Procedure for Change-Point Detection |
| bWGR | Bayesian Whole-Genome Regression |
| BWGS | BreedWheat Genomic Selection Pipeline |
| bwimage | Describe Image Patterns in Natural Structures |
| BWStest | Baumgartner Weiss Schindler Test of Equal Distributions |
| bwsTools | Tools for Case 1 Best-Worst Scaling (MaxDiff) Designs |
| bysykkel | Get City Bike Data from Norway |
| bytescircle | Statistics About Bytes Contained in a File as a Circle Plot |
| bzinb | Bivariate Zero-Inflated Negative Binomial Model Estimator |
| c060 | Extended Inference for Lasso and Elastic-Net Regularized Cox and Generalized Linear Models |
| c212 | Methods for Detecting Safety Signals in Clinical Trials Using Body-Systems (System Organ Classes) |
| c2c | Compare Two Classifications or Clustering Solutions of Varying Structure |
| c3 | 'C3.js' Chart Library |
| c3net | Infering large-scale gene networks with C3NET |
| C443 | See a Forest for the Trees |
| C50 | C5.0 Decision Trees and Rule-Based Models |
| ca | Simple, Multiple and Joint Correspondence Analysis |
| CA3variants | Three-Way Correspondence Analysis Variants |
| cabinets | Project Specific Workspace Organization Templates |
| cabootcrs | Bootstrap Confidence Regions for Simple and Multiple Correspondence Analysis |
| cachem | Cache R Objects with Automatic Pruning |
| cacIRT | Classification Accuracy and Consistency under Item Response Theory |
| CaDENCE | Conditional Density Estimation Network Construction and Evaluation |
| CADFtest | A Package to Perform Covariate Augmented Dickey-Fuller Unit Root Tests |
| CADStat | Provides a GUI to Several Statistical Methods |
| caesar | Encrypts and Decrypts Strings |
| caffsim | Simulation of Plasma Caffeine Concentrations by Using Population Pharmacokinetic Model |
| cAIC4 | Conditional Akaike Information Criterion for 'lme4' and 'nlme' |
| CAinterprTools | Graphical Aid in Correspondence Analysis Interpretation and Significance Testings |
| Cairo | R Graphics Device using Cairo Graphics Library for Creating High-Quality Bitmap (PNG, JPEG, TIFF), Vector (PDF, SVG, PostScript) and Display (X11 and Win32) Output |
| cairoDevice | Embeddable Cairo Graphics Device Driver |
| CAISEr | Comparison of Algorithms with Iterative Sample Size Estimation |
| calACS | Calculations for All Common Subsequences |
| Calculator.LR.FNs | Calculator for LR Fuzzy Numbers |
| calculus | High Dimensional Numerical and Symbolic Calculus |
| calcUnique | Simple Wrapper for Computationally Expensive Functions |
| calcWOI | Calculates the Wavelet-Based Organization Index |
| calendar | Create, Read, Write, and Work with 'iCalander' Files, Calendars and Scheduling Data |
| calendR | Ready to Print Monthly and Yearly Calendars Made with 'ggplot2' |
| CALF | Coarse Approximation Linear Function |
| calibrar | Automated Parameter Estimation for Complex (Ecological) Models |
| calibrate | Calibration of Scatterplot and Biplot Axes |
| calibrateBinary | Calibration for Computer Experiments with Binary Responses |
| CalibrateSSB | Weighting and Estimation for Panel Data with Non-Response |
| calibrator | Bayesian Calibration of Complex Computer Codes |
| CalibratR | Mapping ML Scores to Calibrated Predictions |
| caliver | Calibration and Verification of Gridded Model Outputs |
| callr | Call R from R |
| calmate | Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation |
| calpassapi | R Interface to Access CalPASS API |
| CalSim | The Calibration Simplex |
| CAMAN | Finite Mixture Models and Meta-Analysis Tools - Based on C.A.MAN |
| CamelUp | 'CamelUp' Board Game as a Teaching Aid for Introductory Statistics |
| campfin | Wrangle Campaign Finance Data |
| camsRad | Client for CAMS Radiation Service |
| caMST | Mixed Computerized Adaptive Multistage Testing |
| camtrapR | Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses |
| cancensus | Access, Retrieve, and Work with Canadian Census Data and Geography |
| cancerGI | Analyses of Cancer Gene Interaction |
| CancerGram | Prediction of Anticancer Peptides |
| cancerTiming | Estimation of Temporal Ordering of Cancer Abnormalities |
| candisc | Visualizing Generalized Canonical Discriminant and Canonical Correlation Analysis |
| Canopy | Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing |
| canprot | Compositional Analysis of Differentially Expressed Proteins in Cancer |
| cansim | Accessing Statistics Canada Data Table and Vectors |
| CANSIM2R | Directly Extracts Complete CANSIM Data Tables |
| canvasXpress | Visualization Package for CanvasXpress in R |
| canvasXpress.data | Datasets for the 'canvasXpress' Package |
| cap | Covariate Assisted Principal (CAP) Regression for Covariance Matrix Outcomes |
| cape | Combined Analysis of Pleiotropy and Epistasis for Diversity Outbred Mice |
| caper | Comparative Analyses of Phylogenetics and Evolution in R |
| capitalR | Capital Budgeting Analysis, Annuity Loan Calculations and Amortization Schedules |
| capm | Companion Animal Population Management |
| capn | Capital Asset Pricing for Nature |
| CaPO4Sim | A Virtual Patient Simulator in the Context of Calcium and Phosphate Homeostasis |
| captioner | Numbers Figures and Creates Simple Captions |
| captr | Client for the Captricity API |
| capushe | CAlibrating Penalities Using Slope HEuristics |
| capwire | Estimates population size from non-invasive sampling |
| car | Companion to Applied Regression |
| caracas | Computer Algebra |
| caRamel | Automatic Calibration by Evolutionary Multi Objective Algorithm |
| carat | Covariate-Adaptive Randomization for Clinical Trials |
| CARBayes | Spatial Generalised Linear Mixed Models for Areal Unit Data |
| CARBayesdata | Data Used in the Vignettes Accompanying the CARBayes and CARBayesST Packages |
| CARBayesST | Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data |
| carbonate | Interact with 'carbon.js' |
| carcass | Estimation of the Number of Fatalities from Carcass Searches |
| card | Cardiovascular and Autonomic Research Design |
| carData | Companion to Applied Regression Data Sets |
| cardidates | Identification of Cardinal Dates in Ecological Time Series |
| cardioModel | Cardiovascular Safety Exposure-Response Modeling in Early-Phase Clinical Studies |
| care | High-Dimensional Regression and CAR Score Variable Selection |
| CARE1 | Statistical package for population size estimation in capture-recapture models |
| caRecall | Government of Canada Vehicle Recalls Database API Wrapper |
| careless | Procedures for Computing Indices of Careless Responding |
| caret | Classification and Regression Training |
| caretEnsemble | Ensembles of Caret Models |
| carfima | Continuous-Time Fractionally Integrated ARMA Process for Irregularly Spaced Long-Memory Time Series Data |
| caribou | Estimation of caribou abundance based on large scale aggregations monitored by radio telemetry |
| CarletonStats | Functions for Statistics Classes at Carleton College |
| CARLIT | Ecological Quality Ratios Calculation and Plot |
| Carlson | Carlson Elliptic Integrals and Incomplete Elliptic Integrals |
| caroline | A Collection of Database, Data Structure, Visualization, and Utility Functions for R |
| carpenter | Build Common Tables of Summary Statistics for Reports |
| caRpools | CRISPR AnalyzeR for Pooled CRISPR Screens |
| carrier | Isolate Functions for Remote Execution |
| CARRoT | Predicting Categorical and Continuous Outcomes Using One in Ten Rule |
| CARS | Covariate Assisted Ranking and Screening for Large-Scale Two-Sample Inference |
| carSurv | Correlation-Adjusted Regression Survival (CARS) Scores |
| cartograflow | Filtering Matrix for Flow Mapping |
| cartogram | Create Cartograms with R |
| cartography | Thematic Cartography |
| cartools | Tools for Understanding Highway Performance |
| carx | Censored Autoregressive Model with Exogenous Covariates |
| Cascade | Selection, Reverse-Engineering and Prediction in Cascade Networks |
| CascadeData | Experimental Data of Cascade Experiments in Genomics |
| cascadess | A Style Pronoun for 'htmltools' Tags |
| caschrono | S<e9>ries Temporelles Avec R |
| cascsim | Casualty Actuarial Society Individual Claim Simulator |
| casebase | Fitting Flexible Smooth-in-Time Hazards and Risk Functions via Logistic and Multinomial Regression |
| caseMatch | Identify Similar Cases for Qualitative Case Studies |
| casen | Metodos De Estimacion Con Disenio Probabilistico y Estratificado en Encuesta CASEN (Estimation Methods with Probabilistic Stratified Sampling in CASEN Survey) |
| casino | Play Casino Games |
| CASMAP | Detection of Statistically Significant Combinations of SNPs in Association Mapping |
| cassandRa | Finds Missing Links and Metric Confidence Intervals in Ecological Bipartite Networks |
| CAST | 'caret' Applications for Spatial-Temporal Models |
| castor | Efficient Phylogenetics on Large Trees |
| cat | Analysis of categorical-variable datasets with missing values |
| cat.dt | Computerized Adaptive Testing and Decision Trees |
| cat2cat | Mapping of a Categorical Variable in a Panel Dataset |
| catch | Covariate-Adjusted Tensor Classification in High-Dimensions |
| catchr | Taking the Pain Out of Catching and Handling Conditions |
| catcont | Test, Identify, Select and Mutate Categorical or Continuous Values |
| catdap | Categorical Data Analysis Program Package |
| catdata | Categorical Data |
| CatDataAnalysis | Datasetsfor Categorical Data Analysis by Agresti |
| CatDyn | Fishery Stock Assessment by Catch Dynamics Models |
| cate | High Dimensional Factor Analysis and Confounder Adjusted Testing and Estimation |
| categoryEncodings | Category Variable Encodings |
| catenary | Fits a Catenary to Given Points |
| CatEncoders | Encoders for Categorical Variables |
| CateSelection | Categorical Variable Selection Methods |
| catfun | Categorical Data Analysis |
| cati | Community Assembly by Traits: Individuals and Beyond |
| catIrt | An R Package for Simulating IRT-Based Computerized Adaptive Tests |
| CATkit | Chronomics Analysis Toolkit (CAT): Periodicity Analysis |
| catlearn | Formal Psychological Models of Categorization and Learning |
| catmap | Case-Control and TDT Meta-Analysis Package |
| catmaply | Heatmap for Categorical Data using 'plotly' |
| catnet | Categorical Bayesian Network Inference |
| caTools | Tools: Moving Window Statistics, GIF, Base64, ROC AUC, etc |
| CatPredi | Optimal Categorisation of Continuous Variables in Prediction Models |
| catR | Generation of IRT Response Patterns under Computerized Adaptive Testing |
| CatReg | Solution Paths for Linear and Logistic Regression Models with SCOPE Penalty |
| catseyes | Create Catseye Plots Illustrating the Normal Distribution of the Means |
| catsim | Binary and Categorical Image Similarity Index |
| catspec | Special models for categorical variables |
| catSurv | Computerized Adaptive Testing for Survey Research |
| CATT | The Cochran-Armitage Trend Test |
| CATTexact | Computation of the p-Value for the Exact Conditional Cochran-Armitage Trend Test |
| cattonum | Encode Categorical Features |
| CauchyCP | Powerful Test for Survival Data under Non-Proportional Hazards |
| causact | Accelerated Bayesian Analytics with DAGs |
| causalCmprsk | Nonparametric and Cox-Based Estimation of ATE in Competing Risks |
| causaldrf | Tools for Estimating Causal Dose Response Functions |
| causaleffect | Deriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models |
| CausalGAM | Estimation of Causal Effects with Generalized Additive Models |
| CausalImpact | Inferring Causal Effects using Bayesian Structural Time-Series Models |
| CausalKinetiX | Learning Stable Structures in Kinetic Systems |
| CausalMBSTS | MBSTS Models for Causal Inference and Forecasting |
| causaloptim | An Interface to Specify Causal Graphs and Compute Bounds on Causal Effects |
| CausalQueries | Make, Update, and Query Binary Causal Models |
| causalsens | Selection Bias Approach to Sensitivity Analysis for Causal Effects |
| causalweight | Estimation Methods for Causal Inference Based on Inverse Probability Weighting |
| CautiousLearning | Control Charts with Guaranteed In-Control Performance and Cautious Parameters Learning |
| CAvariants | Correspondence Analysis Variants |
| CB2 | CRISPR Pooled Screen Analysis using Beta-Binomial Test |
| cba | Clustering for Business Analytics |
| cban | Cost Benefit Analysis |
| cbanalysis | Coffee Break Descriptive Analysis |
| cbar | Contextual Bayesian Anomaly Detection in R |
| CBCgrps | Compare Baseline Characteristics Between Groups |
| CBDA | Compressive Big Data Analytics |
| cbinom | Continuous Analog of a Binomial Distribution |
| cbird | Clustering of Multivariate Binary Data with Dimension Reduction via L1-Regularized Likelihood Maximization |
| cblasr | The C Interface to 'BLAS' Routines |
| CBPS | Covariate Balancing Propensity Score |
| cbq | Conditional Binary Quantile Models |
| cbsem | Simulation, Estimation and Segmentation of Composite Based Structural Equation Models |
| cbsodataR | Statistics Netherlands (CBS) Open Data API Client |
| CBSr | Fits Cubic Bezier Spline Functions to Intertemporal and Risky Choice Data |
| CBT | Confidence Bound Target Algorithm |
| CC | Control Charts |
| CCA | Canonical correlation analysis |
| CCAMLRGIS | Antarctic Spatial Data Manipulation |
| ccaPP | (Robust) Canonical Correlation Analysis via Projection Pursuit |
| ccboost | Robust Boosting |
| cccd | Class Cover Catch Digraphs |
| ccChooser | Developing a core collections |
| cccp | Cone Constrained Convex Problems |
| cccrm | Concordance Correlation Coefficient for Repeated (and Non-Repeated) Measures |
| ccda | Combined Cluster and Discriminant Analysis |
| ccdrAlgorithm | CCDr Algorithm for Learning Sparse Gaussian Bayesian Networks |
| cchs | Cox Model for Case-Cohort Data with Stratified Subcohort-Selection |
| cchsflow | Transforming and Harmonizing CCHS Variables |
| ccid | Cross-Covariance Isolate Detect: a New Change-Point Method for Estimating Dynamic Functional Connectivity |
| cclust | Convex Clustering Methods and Clustering Indexes |
| CCM | Correlation Classification Method |
| ccmm | Compositional Mediation Model |
| ccmReportR | Wraps 'CCM' with Utility Functions |
| ccostr | Estimation of Mean Costs in Censored Data |
| CCP | Significance Tests for Canonical Correlation Analysis (CCA) |
| CCpop | One and two locus GWAS of binary phenotype with case-control-population design |
| ccRemover | Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data |
| ccrs | Correct and Cluster Response Style Biased Data |
| ccss | Cluster Circular Systematic Sampling |
| cctools | Tools for the Continuous Convolution Trick in Nonparametric Estimation |
| CCTpack | Consensus Analysis, Model-Based Clustering, and Cultural Consensus Theory Applications |
| cd | CD Data for Entity Resolution |
| cdata | Fluid Data Transformations |
| CDatanet | Modeling Count Data with Peer Effects |
| cdb | Reading and Writing Constant DataBases |
| cdcatR | Cognitive Diagnostic Computerized Adaptive Testing |
| cdcfluview | Retrieve Flu Season Data from the United States Centers for Disease Control and Prevention ('CDC') 'FluView' Portal |
| cdcsis | Conditional Distance Correlation Based Feature Screening and Conditional Independence Inference |
| cder | Interface to the California Data Exchange Center |
| cdfquantreg | Quantile Regression for Random Variables on the Unit Interval |
| CDFt | Downscaling and Bias Correction via Non-Parametric CDF-Transform |
| CDLasso | Coordinate Descent Algorithms for Lasso Penalized L1, L2, and Logistic Regression |
| cdlei | Cause-Deleted Life Expectancy Improvement Procedure |
| cdlTools | Tools to Download and Work with USDA Cropscape Data |
| CDM | Cognitive Diagnosis Modeling |
| CDNmoney | Components of Canadian Monetary and Credit Aggregates |
| cdom | R Functions to Model CDOM Spectra |
| cdparcoord | Top Frequency-Based Parallel Coordinates |
| CDROM | Phylogenetically Classifies Retention Mechanisms of Duplicate Genes from Gene Expression Data |
| cds | Constrained Dual Scaling for Detecting Response Styles |
| CDSeq | A Complete Deconvolution Method using Sequencing Data |
| CDVineCopulaConditional | Sampling from Conditional C- and D-Vine Copulas |
| CEC | Cross-Entropy Clustering |
| cec2013 | Benchmark functions for the Special Session and Competition on Real-Parameter Single Objective Optimization at CEC-2013 |
| ced | The Compact Encoding Detector |
| CEDARS | Simple and Efficient Pipeline for Electronic Health Record Annotation |
| ceg | Chain Event Graph |
| CEGO | Combinatorial Efficient Global Optimization |
| celestial | Collection of Common Astronomical Conversion Routines and Functions |
| cellOrigins | Finds RNASeq Source Tissues Using In Situ Hybridisation Data |
| cellranger | Translate Spreadsheet Cell Ranges to Rows and Columns |
| celltrackR | Motion Trajectory Analysis |
| cellVolumeDist | Functions to fit cell volume distributions and thereby estimate cell growth rates and division times |
| cellWise | Analyzing Data with Cellwise Outliers |
| cem | Coarsened Exact Matching |
| cemco | Fit 'CemCO' Algorithm |
| CenBAR | Broken Adaptive Ridge AFT Model with Censored Data |
| CENFA | Climate and Ecological Niche Factor Analysis |
| cenGAM | Censored Regression with Smooth Terms |
| cenROC | Estimation of the Time-Dependent ROC Curve and AUC for Censored Survival Data |
| censCov | Linear Regression with a Randomly Censored Covariate |
| CensMFM | Finite Mixture of Multivariate Censored/Missing Data |
| censNID | censored NID samples |
| censo2017 | Base de Datos de Facil Acceso del Censo 2017 de Chile (2017 Chilean Census Easy Access Database) |
| censorcopula | Estimate Parameter of Bivariate Copula |
| censReg | Censored Regression (Tobit) Models |
| CensRegMod | Fits Normal and Student-t Censored Regression Model |
| CensSpatial | Censored Spatial Models |
| Census2016 | Data from the Australian Census 2016 |
| censusapi | Retrieve Data from the Census APIs |
| censusGeography | Changes United States Census Geographic Code into Name of Location |
| censusr | Collect Data from the Census API |
| censusxy | Access the U.S. Census Bureau's Geocoding A.P.I. System |
| censys | Tools to Query the 'Censys' API |
| centiserve | Find Graph Centrality Indices |
| centralplot | Show the Strength of Relationships Between Centre and Peripheral Items |
| centrifugeR | Non-Trivial Balance of Centrifuge Rotors |
| CEoptim | Cross-Entropy R Package for Optimization |
| CePa | Centrality-Based Pathway Enrichment |
| cepiigeodist | CEPII's GeoDist Datasets |
| CepLDA | Discriminant Analysis of Time Series in the Presence of Within-Group Spectral Variability |
| cepp | Context Driven Exploratory Projection Pursuit |
| cepR | Busca CEPs Brasileiros |
| cepreader | Read 'CEP' and Legacy 'CANOCO' Files |
| ceramic | Download Online Imagery Tiles |
| CerioliOutlierDetection | Outlier Detection Using the Iterated RMCD Method of Cerioli (2010) |
| CeRNASeek | Identification and Analysis of ceRNA Regulation |
| cernn | Covariance Estimation Regularized by Nuclear Norm Penalties |
| ceRtainty | Certainty Equivalent |
| ceser | Cluster Estimated Standard Errors |
| cetcolor | CET Perceptually Uniform Colour Maps |
| ceterisParibus | Ceteris Paribus Profiles |
| cfa | Configural Frequency Analysis (CFA) |
| CFAcoop | Colony Formation Assay: Taking into Account Cellular Cooperation |
| CFC | Cause-Specific Framework for Competing-Risk Analysis |
| cfda | Categorical Functional Data Analysis |
| cfdecomp | Counterfactual Decomposition: MC Integration of the G-Formula |
| CfEstimateQuantiles | Estimate quantiles using any order Cornish-Fisher expansion |
| CFF | Simple Similarity for User-Based Collaborative Filtering Systems |
| cffdrs | Canadian Forest Fire Danger Rating System |
| CFilt | Collaborative Filtering by Reference Classes |
| cfma | Causal Functional Mediation Analysis |
| cfmortality | Cystic Fibrosis Survival Prediction Model Based on Stanojevic Model |
| cg | Compare Groups, Analytically and Graphically |
| cgal4h | 'CGAL' Version 4 C++ Header Files |
| cgam | Constrained Generalized Additive Model |
| cgAUC | Calculate AUC-type measure when gold standard is continuous and the corresponding optimal linear combination of variables with respect to it |
| cgdsr | R-Based API for Accessing the MSKCC Cancer Genomics Data Server (CGDS) |
| CGE | Computing General Equilibrium |
| CGGP | Composite Grid Gaussian Processes |
| cghRA | Array CGH Data Analysis and Visualization |
| cglasso | Conditional Graphical LASSO for Gaussian Graphical Models with Censored and Missing Values |
| cglm | Fits Conditional Generalized Linear Models |
| cgmanalysis | Clean and Analyze Continuous Glucose Monitor Data |
| CGManalyzer | Continuous Glucose Monitoring Data Analyzer |
| cgmquantify | Analyzing Glucose and Glucose Variability |
| CGP | Composite Gaussian Process Models |
| CGPfunctions | Powell Miscellaneous Functions for Teaching and Learning Statistics |
| cgraph | Computational Graphs |
| cgwtools | Miscellaneous Tools |
| ChainLadder | Statistical Methods and Models for Claims Reserving in General Insurance |
| chandwich | Chandler-Bate Sandwich Loglikelihood Adjustment |
| changedetection | Nonparametric Change Detection in Multivariate Linear Relationships |
| changepoint | Methods for Changepoint Detection |
| changepoint.geo | Geometrically Inspired Multivariate Changepoint Detection |
| changepoint.mv | Changepoint Analysis for Multivariate Time Series |
| changepoint.np | Methods for Nonparametric Changepoint Detection |
| changepointsHD | Change-Point Estimation for Expensive and High-Dimensional Models |
| changepointsVar | Change-Points Detections for Changes in Variance |
| ChangePointTaylor | Identify Changes in Mean |
| ChangepointTesting | Change Point Estimation for Clustered Signals |
| changer | Change R Package Name |
| ChannelAttribution | Markov Model for Online Multi-Channel Attribution |
| ChannelAttributionApp | Shiny Web Application for the Multichannel Attribution Problem |
| Chaos01 | 0-1 Test for Chaos |
| ChaosGame | Chaos Game |
| ChargeTransport | Charge Transfer Rates and Charge Carrier Mobilities |
| charlatan | Make Fake Data |
| chartql | Simplified Language for Plots and Charts |
| CHCN | Canadian Historical Climate Network |
| cheatR | Catch Cheaters |
| cheb | Discrete Linear Chebyshev Approximation |
| chebpol | Multivariate Interpolation |
| checkarg | Check the Basic Validity of a (Function) Argument |
| CheckDigit | Calculate and verify check digits |
| checkdown | Check-Fields and Check-Boxes for 'rmarkdown' |
| checkLuhn | Checks if a Number is Valid Using the Luhn Algorithm |
| checkmate | Fast and Versatile Argument Checks |
| checkpoint | Install Packages from Snapshots on the Checkpoint Server for Reproducibility |
| checkr | Check the Properties of Common R Objects |
| cheddar | Analysis and Visualisation of Ecological Communities |
| cheese | Tools for Working with Data During Statistical Analysis |
| chemCal | Calibration Functions for Analytical Chemistry |
| chemmodlab | A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models |
| chemometrics | Multivariate Statistical Analysis in Chemometrics |
| ChemoSpec | Exploratory Chemometrics for Spectroscopy |
| ChemoSpec2D | Exploratory Chemometrics for 2D Spectroscopy |
| ChemoSpecUtils | Functions Supporting Packages ChemoSpec and ChemoSpec2D |
| cherry | Multiple Testing Methods for Exploratory Research |
| cherryblossom | Cherry Blossom Run Race Results |
| chess | Read, Write, Create and Explore Chess Games |
| chest | Change-in-Estimate Approach to Assess Confounding Effects |
| CHFF | Closest History Flow Field Forecasting for Bivariate Time Series |
| chi | The Chi Distribution |
| chi2x3way | Partitioning Chi-Squared and Tau Index for Three-Way Contingency Tables |
| chicane | Capture Hi-C Analysis Engine |
| chickn | 'Compressive' Hierarchical Kernel Clustering Toolbox |
| childesr | Accessing the 'CHILDES' Database |
| childhoodmortality | Calculating Childhood Mortality Rates |
| childsds | Data and Methods Around Reference Values in Pediatrics |
| chilemapas | Mapas de las Divisiones Politicas y Administrativas de Chile (Maps of the Political and Administrative Divisions of Chile) |
| ChillModels | Processing Chill and Heat Models for Temperate Fruit Trees |
| chillR | Statistical Methods for Phenology Analysis in Temperate Fruit Trees |
| chinese.misc | Miscellaneous Tools for Chinese Text Mining and More |
| ChIPtest | Nonparametric Methods for Identifying Differential Enrichment Regions with ChIP-Seq Data |
| chirps | API Client for CHIRPS |
| chisq.posthoc.test | A Post Hoc Analysis for Pearson's Chi-Squared Test for Count Data |
| chk | Check User-Supplied Function Arguments |
| chlorpromazineR | Convert Antipsychotic Doses to Chlorpromazine Equivalents |
| CHMM | Coupled Hidden Markov Models |
| CHNCapitalStock | Compute Chinese Capital Stocks |
| chngpt | Estimation and Hypothesis Testing for Threshold Regression |
| CHNOSZ | Thermodynamic Calculations and Diagrams for Geochemistry |
| choiceDes | Design Functions for Choice Studies |
| ChoiceModelR | Choice Modeling in R |
| CHOIRBM | Plots the CHOIR Body Map |
| cholera | Amend, Augment and Aid Analysis of John Snow's Cholera Map |
| CholWishart | Cholesky Decomposition of the Wishart Distribution |
| choplump | Choplump tests |
| chopthin | The Chopthin Resampler |
| ChoR | Chordalysis R Package |
| chords | Estimation in Respondent Driven Samples |
| choroplethr | Simplify the Creation of Choropleth Maps in R |
| choroplethrAdmin1 | Contains an Administrative-Level-1 Map of the World |
| choroplethrMaps | Contains Maps Used by the 'choroplethr' Package |
| chorrrds | Music Chords Extraction |
| christmas | Generation of Christmas Cards |
| chromer | Interface to Chromosome Counts Database API |
| chromoMap | Interactive Genomic Visualization of Biological Data |
| chromseq | Split Chromosome 'Fasta' File |
| chron | Chronological Objects which can Handle Dates and Times |
| chronicle | Grammar for Creating R Markdown Reports |
| chronosphere | Earth System History Variables |
| CHsharp | Choi and Hall Style Data Sharpening |
| chunked | Chunkwise Text-File Processing for 'dplyr' |
| chunkhooks | Chunk Hooks for 'R Markdown' |
| chunkR | Read Tables in Chunks |
| CIAAWconsensus | Isotope Ratio Meta-Analysis |
| ciccr | Causal Inference in Case-Control Studies |
| cicerone | Provide Tours of 'Shiny' Applications |
| CIEE | Estimating and Testing Direct Effects in Directed Acyclic Graphs using Estimating Equations |
| CIFsmry | Weighted summary of cumulative incidence functions |
| cifti | Toolbox for Connectivity Informatics Technology Initiative ('CIFTI') Files |
| ciftiTools | Tools for Reading and Visualizing CIFTI Brain Files |
| CIM | Compositional Impact of Migration |
| cimir | Interface to the CIMIS Web API |
| CIMTx | Causal Inference for Multiple Treatments with a Binary Outcome |
| cin | Causal Inference for Neuroscience |
| cinaR | A Computational Pipeline for Bulk 'ATAC-Seq' Profiles |
| cinaRgenesets | Ready-to-Use Curated Gene Sets for 'cinaR' |
| CINID | Curculionidae INstar IDentification |
| CINNA | Deciphering Central Informative Nodes in Network Analysis |
| cinterpolate | Interpolation From C |
| CIplot | Functions to Plot Confidence Interval |
| cir | Centered Isotonic Regression and Dose-Response Utilities |
| circacompare | Analyses of Circadian Data |
| circglmbayes | Bayesian Analysis of a Circular GLM |
| circletyper | Curve Text Elements in 'Shiny' Using 'CircleType.js' |
| circlize | Circular Visualization |
| CircMLE | Maximum Likelihood Analysis of Circular Data |
| CircNNTSR | Statistical Analysis of Circular Data using Nonnegative Trigonometric Sums (NNTS) Models |
| CircOutlier | Detection of Outliers in Circular-Circular Regression |
| CircSpaceTime | Spatial and Spatio-Temporal Bayesian Model for Circular Data |
| CircStats | Circular Statistics, from "Topics in Circular Statistics" (2001) |
| circular | Circular Statistics |
| CircularDDM | Circular Drift-Diffusion Model |
| circularEV | Extreme Value Analysis for Circular Data |
| circumplex | Analysis and Visualization of Circular Data |
| cIRT | Choice Item Response Theory |
| CISE | Common and Individual Structure Explained for Multiple Graphs |
| cit | Causal Inference Test |
| CITAN | CITation ANalysis Toolpack |
| citation | Software Citation Tools |
| citbcmst | CIT Breast Cancer Molecular SubTypes Prediction |
| citccmst | CIT Colon Cancer Molecular SubTypes Prediction |
| citecorp | Client for the Open Citations Corpus |
| ciTools | Confidence or Prediction Intervals, Quantiles, and Probabilities for Statistical Models |
| CityPlot | Visualization of structure and contents of a database |
| CityWaterBalance | Track Flows of Water Through an Urban System |
| ciu | Contextual Importance and Utility |
| ciuupi | Confidence Intervals Utilizing Uncertain Prior Information |
| civis | R Client for the 'Civis Platform API' |
| CJAMP | Copula-Based Joint Analysis of Multiple Phenotypes |
| cjoint | AMCE Estimator for Conjoint Experiments |
| ckanr | Client for the Comprehensive Knowledge Archive Network ('CKAN') API |
| CKAT | Composite Kernel Association Test for Pharmacogenetics Studies |
| CKLRT | Composite Kernel Machine Regression Based on Likelihood Ratio Test |
| Ckmeans.1d.dp | Optimal, Fast, and Reproducible Univariate Clustering |
| CLA | Critical Line Algorithm in Pure R |
| Claddis | Measuring Morphological Diversity and Evolutionary Tempo |
| cladoRcpp | C++ Implementations of Phylogenetic Cladogenesis Calculations |
| clam | Classical Age-Depth Modelling of Cores from Deposits |
| clampSeg | Idealisation of Patch Clamp Recordings |
| ClamR | Time Series Modeling for Climate Change Proxies |
| clarifai | Access to Clarifai API |
| clarkeTest | Distribution-Free Tests of Non-Nested Models |
| class | Functions for Classification |
| ClassComparison | Classes and Methods for "Class Comparison" Problems on Microarrays |
| ClassDiscovery | Classes and Methods for "Class Discovery" with Microarrays or Proteomics |
| classGraph | Construct Graphs of S4 Class Hierarchies |
| classifierplots | Generates a Visualization of Classifier Performance as a Grid of Diagnostic Plots |
| classifly | Explore classification models in high dimensions |
| classInt | Choose Univariate Class Intervals |
| cld2 | Google's Compact Language Detector 2 |
| cld3 | Google's Compact Language Detector 3 |
| clda | Convolution-Based Linear Discriminant Analysis |
| clean | Fast and Easy Data Cleaning |
| CleanBSequences | Clean Biological Sequences |
| cleancall | C Resource Cleanup via Exit Handlers |
| cleandata | To Inspect and Manipulate Data; and to Keep Track of This Process |
| cleaner | Fast and Easy Data Cleaning |
| cleanerR | How to Handle your Missing Data |
| cleangeo | Cleaning Geometries from Spatial Objects |
| cleanNLP | A Tidy Data Model for Natural Language Processing |
| cleanr | Helps You to Code Cleaner |
| clere | Simultaneous Variables Clustering and Regression |
| clespr | Composite Likelihood Estimation for Spatial Data |
| clevr | Clustering and Link Prediction Evaluation in R |
| clhs | Conditioned Latin Hypercube Sampling |
| cli | Helpers for Developing Command Line Interfaces |
| cliapp | Create Rich Command Line Applications |
| ClickClust | Model-Based Clustering of Categorical Sequences |
| ClickClustCont | Mixtures of Continuous Time Markov Models |
| clickR | Fix Data and Create Report Tables from Different Objects |
| clickstream | Analyzes Clickstreams Based on Markov Chains |
| clifford | Arbitrary Dimensional Clifford Algebras |
| clifro | Easily Download and Visualise Climate Data from CliFlo |
| CliftLRD | Complex-Valued Wavelet Lifting Estimators of the Hurst Exponent for Irregularly Sampled Time Series |
| clikcorr | Censoring Data and Likelihood-Based Correlation Estimation |
| climaemet | Climate AEMET Tools |
| climate | Interface to Download Meteorological (and Hydrological) Datasets |
| climateStability | Estimating Climate Stability from Climate Model Data |
| climatol | Climate Tools (Series Homogenization and Derived Products) |
| climatrends | Climate Variability Indices for Ecological Modelling |
| ClimClass | Climate Classification According to Several Indices |
| climdex.pcic | PCIC Implementation of Climdex Routines |
| ClimDown | Climate Downscaling Library for Daily Climate Model Output |
| clime | Constrained L1-minimization for Inverse (covariance) Matrix Estimation |
| climextRemes | Tools for Analyzing Climate Extremes |
| ClimInd | Climate Indices |
| ClimMobTools | API Client for the 'ClimMob' Platform |
| ClimProjDiags | Set of Tools to Compute Various Climate Indices |
| climwin | Climate Window Analysis |
| clinDR | Simulation and Analysis Tools for Clinical Dose Response Modeling |
| clinfun | Clinical Trial Design and Data Analysis Functions |
| ClinicalTrialSummary | Summary Measures for Clinical Trials with Survival Outcomes |
| ClinicalUtilityRecal | Recalibration Methods for Improved Clinical Utility of Risk Scores |
| clinmon | Hemodynamic Calculations from Clinical Monitoring |
| clinPK | Clinical Pharmacokinetics Toolkit |
| clinsig | Clinical Significance Functions |
| clinUtiDNA | Clinical Utility of DNA Testing |
| clipp | Calculating Likelihoods by Pedigree Paring |
| clipr | Read and Write from the System Clipboard |
| CliquePercolation | Clique Percolation for Networks |
| clisymbols | Unicode Symbols at the R Prompt |
| CLME | Constrained Inference for Linear Mixed Effects Models |
| clogitboost | Boosting Conditional Logit Model |
| clogitL1 | Fitting Exact Conditional Logistic Regression with Lasso and Elastic Net Penalties |
| clogitLasso | Sparse Conditional Logistic Regression for Matched Studies |
| CloneSeeker | Seeking and Finding Clones in Copy Number and Sequencing Data |
| CLONETv2 | Clonality Estimates in Tumor |
| clordr | Composite Likelihood Inference and Diagnostics for Replicated Spatial Ordinal Data |
| cloudml | Interface to the Google Cloud Machine Learning Platform |
| cloudUtil | Cloud Utilization Plots |
| clpAPI | R Interface to C API of COIN-or Clp |
| clr | Curve Linear Regression via Dimension Reduction |
| CLSOCP | A smoothing Newton method SOCP solver |
| clttools | Central Limit Theorem Experiments (Theoretical and Simulation) |
| clubSandwich | Cluster-Robust (Sandwich) Variance Estimators with Small-Sample Corrections |
| clue | Cluster Ensembles |
| ClueR | Cluster Evaluation |
| CluMP | Clustering of Micro Panel Data |
| ClusBoot | Bootstrap Clustering |
| cluscov | Clustered Covariate Regression |
| clusrank | Wilcoxon Rank Tests for Clustered Data |
| ClussCluster | Simultaneous Detection of Clusters and Cluster-Specific Genes in High-Throughput Transcriptome Data |
| clust.bin.pair | Statistical Methods for Analyzing Clustered Matched Pair Data |
| ClustBlock | Clustering of Datasets |
| clustcurv | Determining Groups in Multiples Curves |
| clustDRM | Clustering Dose-Response Curves and Fitting Appropriate Models to Them |
| clustEff | Clusters of Effects Curves in Quantile Regression Models |
| cluster | "Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al. |
| cluster.datasets | Cluster Analysis Data Sets |
| Cluster.OBeu | Cluster Analysis 'OpenBudgets.eu' |
| clusterability | Performs Tests for Cluster Tendency of a Data Set |
| ClusterBootstrap | Analyze Clustered Data with Generalized Linear Models using the Cluster Bootstrap |
| clusterCrit | Clustering Indices |
| clusteredinterference | Causal Effects from Observational Studies with Clustered Interference |
| ClusteredMutations | Location and Visualization of Clustered Somatic Mutations |
| clusterGeneration | Random Cluster Generation (with Specified Degree of Separation) |
| clusterGenomics | Identifying clusters in genomics data by recursive partitioning |
| clusterhap | Clustering Genotypes in Haplotypes |
| Clustering | Execution of Multiple Clustering Algorithm |
| clustering.sc.dp | Optimal Distance-Based Clustering for Multidimensional Data with Sequential Constraint |
| clustermole | Unbiased Single-Cell Transcriptomic Data Cell Type Identification |
| clustermq | Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM, PBS/Torque) |
| clusternomics | Integrative Clustering for Heterogeneous Biomedical Datasets |
| clusternor | A Parallel Clustering Non-Uniform Memory Access ('NUMA') Optimized Package |
| clusterPower | Power Calculations for Cluster-Randomized and Cluster-Randomized Crossover Trials |
| ClusterR | Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans, K-Medoids and Affinity Propagation Clustering |
| ClusterRankTest | Rank Tests for Clustered Data |
| clusterRepro | Reproducibility of Gene Expression Clusters |
| clusterSEs | Calculate Cluster-Robust p-Values and Confidence Intervals |
| clusterSim | Searching for Optimal Clustering Procedure for a Data Set |
| ClusterStability | Assessment of Stability of Individual Objects or Clusters in Partitioning Solutions |
| clustertend | Check the Clustering Tendency |
| clusteval | Evaluation of Clustering Algorithms |
| ClustGeo | Hierarchical Clustering with Spatial Constraints |
| ClustImpute | K-means clustering with build-in missing data imputation |
| clustMD | Model Based Clustering for Mixed Data |
| clustMixType | k-Prototypes Clustering for Mixed Variable-Type Data |
| ClustMMDD | Variable Selection in Clustering by Mixture Models for Discrete Data |
| ClustOfVar | Clustering of Variables |
| ClusTorus | Clustering on the Torus by Conformal Prediction |
| clusTransition | Monitor Changes in Cluster Solutions of Dynamic Datasets |
| clustrd | Methods for Joint Dimension Reduction and Clustering |
| clustree | Visualise Clusterings at Different Resolutions |
| clustringr | Cluster Strings by Edit-Distance |
| CLUSTShiny | Interactive Document for Working with Cluster Analysis |
| clustsig | Significant Cluster Analysis |
| ClustVarLV | Clustering of Variables Around Latent Variables |
| clustvarsel | Variable Selection for Gaussian Model-Based Clustering |
| ClusVis | Gaussian-Based Visualization of Gaussian and Non-Gaussian Model-Based Clustering |
| clv | Cluster Validation Techniques |
| clValid | Validation of Clustering Results |
| CLVTools | Tools for Customer Lifetime Value Estimation |
| cmaes | Covariance Matrix Adapting Evolutionary Strategy |
| cmaesr | Covariance Matrix Adaptation Evolution Strategy |
| CMapViz | Representation Tool For Output Of Connectivity Map (CMap) Analysis |
| cmaRs | Implementation of the Conic Multivariate Adaptive Regression Splines in R |
| CMatching | Matching Algorithms for Causal Inference with Clustered Data |
| CMC | Cronbach-Mesbah Curve |
| cmce | Computer Model Calibration for Deterministic and Stochastic Simulators |
| cmcR | An Implementation of the 'Congruent Matching Cells' Method |
| cmdfun | Framework for Building Interfaces to Shell Commands |
| CME.assistant | Reusable Assisting Functions for Child Mortality Estimation |
| cmenet | Bi-Level Selection of Conditional Main Effects |
| CMF | Collective Matrix Factorization |
| cmfrec | Collective Matrix Factorization for Recommender Systems |
| CMLS | Constrained Multivariate Least Squares |
| cmm | Categorical Marginal Models |
| cmmr | CEU Mass Mediator RESTful API |
| cmna | Computational Methods for Numerical Analysis |
| cmocean | Beautiful Colour Maps for Oceanography |
| CMplot | Circle Manhattan Plot |
| cmprsk | Subdistribution Analysis of Competing Risks |
| cmprskcoxmsm | Use IPW to Estimate Treatment Effect under Competing Risks |
| cmprskQR | Analysis of Competing Risks Using Quantile Regressions |
| cmrutils | Misc Functions of the Center for Mathematical Research |
| cms | Calculate Medicare Reimbursement |
| cmsaf | A Toolbox for CM SAF NetCDF Data |
| cmsafops | Tools for CM SAF NetCDF Data |
| cmsafvis | Tools to Visualize CM SAF NetCDF Data |
| CMShiny | Interactive Document for Working with Confusion Matrix |
| cmstatr | Statistical Methods for Composite Material Data |
| cmvnorm | The Complex Multivariate Gaussian Distribution |
| cna | Causal Modeling with Coincidence Analysis |
| CNAIM | Common Network Asset Indices Methodology (CNAIM) |
| cnaOpt | Optimizing Consistency and Coverage in Configurational Causal Modeling |
| cnbdistr | Conditional Negative Binomial Distribution |
| cncaGUI | Canonical Non-Symmetrical Correspondence Analysis in R |
| CNLTreg | Complex-Valued Wavelet Lifting for Signal Denoising |
| CNLTtsa | Complex-Valued Wavelet Lifting for Univariate and Bivariate Time Series Analysis |
| CNOGpro | Copy Numbers of Genes in prokaryotes |
| cNORM | Continuous Norming |
| CNprep | Pre-process DNA Copy Number (CN) Data for Detection of CN Events |
| CNull | Fast Algorithms for Frequency-Preserving Null Models in Ecology |
| cnum | Chinese Numerals Processing |
| CNVRG | Dirichlet-Multinomial Modelling of Relative Abundance Data |
| CNVScope | A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization |
| coala | A Framework for Coalescent Simulation |
| coalescentMCMC | MCMC Algorithms for the Coalescent |
| coalitions | Bayesian "Now-Cast" Estimation of Event Probabilities in Multi-Party Democracies |
| coarseDataTools | Analysis of Coarsely Observed Data |
| cobalt | Covariate Balance Tables and Plots |
| cobiclust | Biclustering via Latent Block Model Adapted to Overdispersed Count Data |
| COBRA | Nonlinear Aggregation of Predictors |
| cobs | Constrained B-Splines (Sparse Matrix Based) |
| coca | Cluster-of-Clusters Analysis |
| cocktailApp | 'shiny' App to Discover Cocktails |
| CoClust | Copula Based Cluster Analysis |
| COCONUT | COmbat CO-Normalization Using conTrols (COCONUT) |
| cocor | Comparing Correlations |
| cocorresp | Co-Correspondence Analysis Methods |
| cocron | Statistical Comparisons of Two or more Alpha Coefficients |
| coda | Output Analysis and Diagnostics for MCMC |
| coda.base | A Basic Set of Functions for Compositional Data Analysis |
| codadiags | Markov chain Monte Carlo burn-in based on "bridge" statistics |
| codalm | Transformation-Free Linear Regression for Compositional Outcomes and Predictors |
| CodataGS | Genomic Prediction Using SNP Codata |
| cOde | Automated C Code Generation for 'deSolve', 'bvpSolve' |
| codebook | Automatic Codebooks from Metadata Encoded in Dataset Attributes |
| codebreaker | Retro Logic Game |
| CodeDepends | Analysis of R Code for Reproducible Research and Code Comprehension |
| codemetar | Generate 'CodeMeta' Metadata for R Packages |
| codep | Multiscale Codependence Analysis |
| coder | Deterministic Categorization of Items Based on External Code Data |
| codetools | Code Analysis Tools for R |
| codexcopd | The CODEX (Comorbidity, Obstruction, Dyspnea, and Previous Severe Exacerbations) Index: Short and Medium-Term Prognosis in Patients Hospitalized for Chronic Obstructive Pulmonary Disease (COPD) Exacerbations |
| codified | Produce Standard/Formalized Demographics Tables |
| CoDiNA | Co-Expression Differential Network Analysis |
| codingMatrices | Alternative Factor Coding Matrices for Linear Model Formulae |
| codyn | Community Dynamics Metrics |
| coefficientalpha | Robust Coefficient Alpha and Omega with Missing and Non-Normal Data |
| coefplot | Plots Coefficients from Fitted Models |
| coenocliner | Coenocline Simulation |
| coenoflex | Gradient-Based Coenospace Vegetation Simulator |
| coexist | Species coexistence modeling and analysis |
| cofad | Contrast Analyses for Factorial Designs |
| cofeatureR | Generate Cofeature Matrices |
| CoFRA | Complete Functional Regulation Analysis |
| coga | Convolution of Gamma Distributions |
| cogmapr | Cognitive Mapping Tools Based on Coding of Textual Sources |
| cognitoR | Authentication for 'Shiny' Apps with 'Amazon Cognito' |
| CohortPlat | Simulation of Cohort Platform Trials for Combination Treatments |
| cohorttools | Cohort Data Analyses |
| coil | Contextualization and Evaluation of COI-5P Barcode Data |
| CoImp | Copula Based Imputation Method |
| coin | Conditional Inference Procedures in a Permutation Test Framework |
| coinmarketcapr | Get 'Cryptocurrencies' Market Cap Prices from Coin Market Cap |
| CoinMinD | Simultaneous Confidence Interval for Multinomial Proportion |
| Coinprofile | Coincident Profile |
| cointmonitoR | Consistent Monitoring of Stationarity and Cointegrating Relationships |
| cointReg | Parameter Estimation and Inference in a Cointegrating Regression |
| cold | Count Longitudinal Data |
| colf | Constrained Optimization on Linear Function |
| collapse | Advanced and Fast Data Transformation |
| CollapseLevels | Collapses Levels, Computes Information Value and WoE |
| collapsibleTree | Interactive Collapsible Tree Diagrams using 'D3.js' |
| collectArgs | Quickly and Neatly Collect Arguments from One Environment to Pass to Another |
| collections | High Performance Container Data Types |
| collector | Quantified Risk Assessment Data Collection |
| collidr | Check for Namespace Collisions Across Packages and Functions on CRAN |
| collin | Effects of Collinearity in Distributed Lag and Other Models |
| CollocInfer | Collocation Inference for Dynamic Systems |
| collpcm | Collapsed Latent Position Cluster Model for Social Networks |
| collUtils | Auxiliary Package for Package 'CollapsABEL' |
| colmozzie | Dengue Cases and Climate Variables in Colombo Sri Lanka |
| coloc | Colocalisation Tests of Two Genetic Traits |
| colocalization | Normalized Spatial Intensity Correlation |
| colocalized | Clusters of Colocalized Sequences |
| colocr | Conduct Co-Localization Analysis of Fluorescence Microscopy Images |
| colorBlindness | Safe Color Set for Color Blindness |
| colorDF | Colorful Data Frames in R Terminal |
| colordistance | Distance Metrics for Image Color Similarity |
| coloredICA | Implementation of Colored Independent Component Analysis and Spatial Colored Independent Component Analysis |
| colorednoise | Simulate Temporally Autocorrelated Populations |
| colorfindr | Extract Colors from Windows BMP, JPEG, PNG, TIFF, and SVG Format Images |
| colorfulVennPlot | Plot and add custom coloring to Venn diagrams for 2-dimensional, 3-dimensional and 4-dimensional data |
| colorhcplot | Colorful Hierarchical Clustering Dendrograms |
| colorist | Coloring Wildlife Distributions in Space-Time |
| colorizer | Colorize Old Images Using the 'DeOldify' Image Colorization API |
| colormap | Color Palettes using Colormaps Node Module |
| ColorPalette | Color Palettes Generator |
| colorpatch | Optimized Rendering of Fold Changes and Confidence Values |
| colorr | Color Palettes for EPL, MLB, NBA, NHL, and NFL Teams |
| colorRamps | Builds color tables |
| colorscience | Color Science Methods and Data |
| colorspace | A Toolbox for Manipulating and Assessing Colors and Palettes |
| colorSpec | Color Calculations with Emphasis on Spectral Data |
| colortools | Tools for colors in a Hue-Saturation-Value (HSV) color model |
| colourlovers | R Client for the COLOURlovers API |
| colourpicker | A Colour Picker Tool for Shiny and for Selecting Colours in Plots |
| colourvalues | Assigns Colours to Values |
| colourvision | Colour Vision Models |
| colr | Functions to Select and Rename Data |
| colt | Command-Line Color Themes |
| comat | Creates Co-Occurrence Matrices of Spatial Data |
| comato | Analysis of Concept Maps and Concept Landscapes |
| COMBAT | A Combined Association Test for Genes using Summary Statistics |
| combinat | combinatorics utilities |
| combinedevents | Calculate Scores and Marks for Track and Field Combined Events |
| CombinePortfolio | Estimation of Optimal Portfolio Weights by Combining Simple Portfolio Strategies |
| CombinePValue | Combine a Vector of Correlated p-values |
| CombinS | Construction Methods of some Series of PBIB Designs |
| combiter | Combinatorics Iterators |
| CombMSC | Combined Model Selection Criteria |
| comclim | Community Climate Statistics |
| cometExactTest | Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm |
| cometr | 'Comet' API for R |
| comf | Models and Equations for Human Comfort Research |
| comFuncs | Commonly Used Functions for R Shiny Applications |
| ComICS | Computational Methods for Immune Cell-Type Subsets |
| CoMiRe | Convex Mixture Regression |
| commandr | Command pattern in R |
| CommEcol | Community Ecology Analyses |
| commentr | Print Nicely Formatted Comments for Use in Script Files |
| CommonJavaJars | Useful Libraries for Building a Java Based GUI under R |
| commonmark | High Performance CommonMark and Github Markdown Rendering in R |
| CommonMean.Copula | Common Mean Vector under Copula Models |
| commonsMath | JAR Files of the Apache Commons Mathematics Library |
| CommT | Comparative Phylogeographic Analysis using the Community Tree Framework |
| CommunityCorrelogram | Ecological Community Correlogram |
| comorbidity | Computing Comorbidity Scores |
| Comp2ROC | Compare Two ROC Curves that Intersect |
| Compack | Regression with Compositional Covariates |
| compactr | Creates empty plots with compact axis notation |
| comparator | Comparison Functions for Clustering and Record Linkage |
| compare | Comparing Objects for Differences |
| compareC | Compare Two Correlated C Indices with Right-censored Survival Outcome |
| CompareCausalNetworks | Interface to Diverse Estimation Methods of Causal Networks |
| CompAREdesign | Statistical Functions for the Design of Studies with Composite Endpoints |
| compareDF | Do a Git Style Diff of the Rows Between Two Dataframes with Similar Structure |
| compareGroups | Descriptive Analysis by Groups |
| compareODM | comparison of medical forms in CDISC ODM format |
| comparer | Compare Output and Run Time |
| CompareTests | Correct for Verification Bias in Diagnostic Accuracy & Agreement |
| comparison | Multivariate Likelihood Ratio Calculation and Evaluation |
| ComparisonCR | Comparison of Cumulative Incidence Between Two Groups Under Competing Risks |
| ComparisonSurv | Comparison of Survival Curves Between Two Groups |
| compas | Conformational Manipulations of Protein Atomic Structures |
| compboost | C++ Implementation of Component-Wise Boosting |
| CompDist | Multisection Composite Distributions |
| compendiumdb | Tools for Retrieval and Storage of Functional Genomics Data |
| comperank | Ranking Methods for Competition Results |
| comperes | Manage Competition Results |
| competitiontoolbox | A Graphical User Interface for Antitrust and Trade Practitioners |
| compHclust | Complementary Hierarchical Clustering |
| Compind | Composite Indicators Functions |
| completejourney | Retail Shopping Data |
| complexity | Calculate the Proportion of Permutations in Line with an Informative Hypothesis |
| complexplus | Functions of Complex or Real Variable |
| ComplexUpset | Create Complex UpSet Plots Using 'ggplot2' Components |
| complmrob | Robust Linear Regression with Compositional Data as Covariates |
| CompLognormal | Functions for actuarial scientists |
| CompModels | Pseudo Computer Models for Optimization |
| COMPoissonReg | Conway-Maxwell Poisson (COM-Poisson) Regression |
| Compositional | Compositional Data Analysis |
| compositions | Compositional Data Analysis |
| composits | Compositional, Multivariate and Univariate Time Series Outlier Ensemble |
| compound.Cox | Univariate Feature Selection and Compound Covariate for Predicting Survival |
| CompoundEvents | Statistical Modeling of Compound Events |
| Compounding | Computing Continuous Distributions |
| CompQuadForm | Distribution Function of Quadratic Forms in Normal Variables |
| CompR | Paired Comparison Data Analysis |
| CompRandFld | Composite-Likelihood Based Analysis of Random Fields |
| comprehenr | List Comprehensions |
| compstatr | Tools for St. Louis Crime Data |
| compute.es | Compute Effect Sizes |
| comsimitv | Flexible Framework for Simulating Community Assembly |
| comtradr | Interface with the United Nations Comtrade API |
| con2aqi | Calculate the AQI from Pollutant Concentration |
| con2lki | Calculate the Dutch Air Quality Index (LKI) |
| Conake | Continuous Associated Kernel Estimation |
| concatenate | Human-Friendly Text from Unknown Strings |
| concaveman | A Very Fast 2D Concave Hull Algorithm |
| conclust | Pairwise Constraints Clustering |
| ConConPiWiFun | Optimisation with Continuous Convex Piecewise (Linear and Quadratic) Functions |
| concordance | Product Concordance |
| ConcordanceTest | An Alternative to the Kruskal-Wallis Based on the Kendall Tau Distance |
| concorR | CONCOR and Supplemental Functions |
| concreg | Concordance Regression |
| CONCUR | Copy Number Profile Curve-Based Association Test |
| concurve | Computes & Plots Compatibility (Confidence), Surprisal, & Likelihood Distributions |
| cond | Approximate Conditional Inference for Logistic and Loglinear Models |
| condformat | Conditional Formatting in Data Frames |
| condGEE | Parameter estimation in conditional GEE for recurrent event gap times |
| CondIndTests | Nonlinear Conditional Independence Tests |
| condir | Computation of P Values and Bayes Factors for Conditioning Data |
| conditionz | Control How Many Times Conditions are Thrown |
| condmixt | Conditional Density Estimation with Neural Network Conditional Mixtures |
| condMVNorm | Conditional Multivariate Normal Distribution |
| CONDOP | Condition-Dependent Operon Predictions |
| CondReg | Condition Number Regularized Covariance Estimation |
| condSURV | Estimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data |
| condTruncMVN | Conditional Truncated Multivariate Normal Distribution |
| condusco | Query-Driven Pipeline Execution and Query Templates |
| condvis | Conditional Visualization for Statistical Models |
| condvis2 | Interactive Conditional Visualization for Supervised and Unsupervised Models in Shiny |
| coneproj | Primal or Dual Cone Projections with Routines for Constrained Regression |
| conf | Visualization and Analysis of Statistical Measures of Confidence |
| conf.design | Construction of factorial designs |
| confidence | Confidence Estimation of Environmental State Classifications |
| config | Manage Environment Specific Configuration Values |
| ConfigParser | Package to Parse an INI File, Including Variable Interpolation |
| configr | An Implementation of Parsing and Writing Configuration File (JSON/INI/YAML/TOML) |
| configural | Multivariate Profile Analysis |
| confinterpret | Descriptive Interpretations of Confidence Intervals |
| confintr | Confidence Intervals |
| ConfIntVariance | Confidence Interval for the Univariate Population Variance without Normality Assumption |
| conflicted | An Alternative Conflict Resolution Strategy |
| conflr | Client for 'Confluence' API |
| conformalClassification | Transductive and Inductive Conformal Predictions for Classification Problems |
| ConfoundedMeta | Sensitivity Analyses for Unmeasured Confounding in Meta-Analyses |
| confoundr | Diagnostics for Confounding of Time-Varying and Other Joint Exposures |
| confreq | Configural Frequencies Analysis Using Log-Linear Modeling |
| confSAM | Estimates and Bounds for the False Discovery Proportion, by Permutation |
| CongreveLamsdell2016 | Distance Metrics for Trees Generated by Congreve and Lamsdell |
| conicfit | Algorithms for Fitting Circles, Ellipses and Conics Based on the Work by Prof. Nikolai Chernov |
| conics | Plot Conics |
| Conigrave | Flexible Tools for Multiple Imputation |
| conjoint | An Implementation of Conjoint Analysis Method |
| ConjointChecks | A package to check the cancellation axioms of conjoint measurement |
| conjurer | A Parametric Method for Generating Synthetic Data |
| connections | Integrates with the 'RStudio' Connections Pane and 'pins' |
| ConnMatTools | Tools for Working with Connectivity Data |
| conogive | Congeneric Normal-Ogive Model |
| conos | Clustering on Network of Samples |
| conover.test | Conover-Iman Test of Multiple Comparisons Using Rank Sums |
| conquer | Convolution-Type Smoothed Quantile Regression |
| conquestr | An R Front End for 'ACER ConQuest' |
| ConR | Computation of Parameters Used in Preliminary Assessment of Conservation Status |
| ConSpline | Partial Linear Least-Squares Regression using Constrained Splines |
| ConsRank | Compute the Median Ranking(s) According to the Kemeny's Axiomatic Approach |
| ConsReg | Fits Regression & ARMA Models Subject to Constraints to the Coefficient |
| constants | Reference on Constants, Units and Uncertainty |
| constellation | Identify Event Sequences Using Time Series Joins |
| constrainedKriging | Constrained, Covariance-Matching Constrained and Universal Point or Block Kriging |
| conStruct | Models Spatially Continuous and Discrete Population Genetic Structure |
| contact | Creating Contact and Social Networks |
| contactdata | Social Contact Matrices for 152 Countries |
| container | Deque, Set, and Dict - R6 Based Container Classes with Iterators |
| ContaminatedMixt | Clustering and Classification with the Contaminated Normal |
| contentid | An Interface for Content-Based Identifiers |
| contextual | Simulation and Analysis of Contextual Multi-Armed Bandit Policies |
| contfrac | Continued Fractions |
| conting | Bayesian Analysis of Contingency Tables |
| contingency | Discrete Multivariate Probability Distributions |
| contoureR | Contouring of Non-Regular Three-Dimensional Data |
| ContourFunctions | Create Contour Plots from Data or a Function |
| contourPlot | Plots x,y,z Co-Ordinates in a Contour Map |
| contrast | A Collection of Contrast Methods |
| contribution | A Tiny Contribution Table Generator Based on 'ggplot2' |
| control | A Control Systems Toolbox |
| controlTest | Quantile Comparison for Two-Sample Right-Censored Survival Data |
| ConvergenceClubs | Finding Convergence Clubs |
| ConvergenceConcepts | Seeing Convergence Concepts in Action |
| convergEU | Monitoring Convergence of EU Countries |
| convertGraph | Convert Graphical Files Format |
| convertr | Convert Between Units |
| convevol | Analysis of Convergent Evolution |
| convexjlr | Disciplined Convex Programming in R using 'Convex.jl' |
| convey | Income Concentration Analysis with Complex Survey Samples |
| convoSPAT | Convolution-Based Nonstationary Spatial Modeling |
| cooccur | Probabilistic Species Co-Occurrence Analysis in R |
| cooccurNet | Co-Occurrence Network |
| CoOL | Causes of Outcome Learning |
| coop | Co-Operation: Fast Covariance, Correlation, and Cosine Similarity Operations |
| CoopGame | Important Concepts of Cooperative Game Theory |
| coopProductGame | Cooperative Aspects of Linear Production Programming Problems |
| cooptrees | Cooperative aspects of optimal trees in weighted graphs |
| CoordinateCleaner | Automated Cleaning of Occurrence Records from Biological Collections |
| copBasic | General Bivariate Copula Theory and Many Utility Functions |
| copCAR | Fitting the copCAR Regression Model for Discrete Areal Data |
| CopCTS | Copula-Based Semiparametric Analysis for Time Series Data with Detection Limits |
| cope | Coverage Probability Excursion (CoPE) Sets |
| copent | Estimating Copula Entropy |
| coppeCosenzaR | COPPE-Cosenza Fuzzy Hierarchy Model |
| coprimary | Sample Size Calculation for Two Primary Time-to-Event Endpoints in Clinical Trials |
| cops | Cluster Optimized Proximity Scaling |
| copula | Multivariate Dependence with Copulas |
| Copula.Markov | Copula-Based Estimation and Statistical Process Control for Serially Correlated Time Series |
| Copula.Markov.survival | Copula Markov Model with Dependent Censoring |
| Copula.surv | Association Analysis of Bivariate Survival Data Based on Copulas |
| CopulaCenR | Copula-Based Regression Models for Bivariate Censored Data |
| copulaData | Data Sets for Copula Modeling |
| CopulaDTA | Copula Based Bivariate Beta-Binomial Model for Diagnostic Test Accuracy Studies |
| copulaedas | Estimation of Distribution Algorithms Based on Copulas |
| copulareg | Copula Regression |
| CopulaREMADA | Copula Mixed Models for Multivariate Meta-Analysis of Diagnostic Test Accuracy Studies |
| CopyDetect | Computing Response Similarity Indices for Multiple-Choice Tests |
| cora | Cora Data for Entity Resolution |
| coRanking | Co-Ranking Matrix |
| corazon | Apply 'colorffy' Color Gradients Within 'shiny' Elements |
| Corbi | Collection of Rudimentary Bioinformatics Tools |
| CorBin | Generate High-Dimensional Binary Data with Correlation Structures |
| corclass | Correlational Class Analysis |
| cord | Community Estimation in G-Models via CORD |
| CorDiff | Set-Based Differential Covariance Testing for Genomics |
| cordillera | Calculation of the OPTICS Cordillera |
| CORE | Cores of Recurrent Events |
| coreCT | Programmatic Analysis of Sediment Cores Using Computed Tomography Imaging |
| corehunter | Multi-Purpose Core Subset Selection |
| CORElearn | Classification, Regression and Feature Evaluation |
| corels | R Binding for the 'Certifiably Optimal RulE ListS (Corels)' Learner |
| coreNLP | Wrappers Around Stanford CoreNLP Tools |
| coreSim | Core Functionality for Simulating Quantities of Interest from Generalised Linear Models |
| coreTDT | TDT for compound heterozygous and recessive models |
| corHMM | Hidden Markov Models of Character Evolution |
| corkscrew | Preprocessor for Data Modeling |
| corlink | Record Linkage, Incorporating Imputation for Missing Agreement Patterns, and Modeling Correlation Patterns Between Fields |
| CORM | The Clustering of Regression Models Method |
| CornerstoneR | Collection of Scripts for Interface Between 'Cornerstone' and 'R' |
| cornet | Elastic Net with Dichotomised Outcomes |
| coro | 'Coroutines' for R |
| coroICA | Confounding Robust Independent Component Analysis for Noisy and Grouped Data |
| corona | Coronavirus ('Rona') Data Exploration |
| coronavirus | The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Dataset |
| corpcor | Efficient Estimation of Covariance and (Partial) Correlation |
| corpora | Statistics and Data Sets for Corpus Frequency Data |
| CorporaCoCo | Corpora Co-Occurrence Comparison |
| corporaexplorer | A 'Shiny' App for Exploration of Text Collections |
| CoRpower | Power Calculations for Assessing Correlates of Risk in Clinical Efficacy Trials |
| corpus | Text Corpus Analysis |
| corpustools | Managing, Querying and Analyzing Tokenized Text |
| corr2D | Implementation of 2D Correlation Analysis in R |
| corrarray | Correlation Arrays and 2-Sample Correlation Matrices |
| CorrBin | Nonparametrics with Clustered Binary and Multinomial Data |
| corrcoverage | Correcting the Coverage of Credible Sets from Bayesian Genetic Fine Mapping |
| corrDNA | Finding Associations in Position-Wise Aligned DNA Sequence Dataset |
| correctedAUC | Correcting AUC for Measurement Error |
| CorrectedFDR | Correcting False Discovery Rates |
| CorrectOverloadedPeaks | Correct Overloaded Peaks from GC-APCI-MS Data |
| corregp | Functions and Methods for Correspondence Regression |
| correlation | Methods for Correlation Analysis |
| correlationfunnel | Speed Up Exploratory Data Analysis (EDA) with the Correlation Funnel |
| correlbinom | Correlated Binomial Probabilities |
| corrgram | Plot a Correlogram |
| corrgrapher | Explore Correlations Between Variables in a Machine Learning Model |
| CorrMixed | Estimate Correlations Between Repeatedly Measured Endpoints (E.g., Reliability) Based on Linear Mixed-Effects Models |
| corrplot | Visualization of a Correlation Matrix |
| corrr | Correlations in R |
| corrsieve | CorrSieve |
| CorrToolBox | Modeling Correlational Magnitude Transformations in Discretization Contexts |
| corset | Arbitrary Bounding of Series and Time Series Objects |
| cort | Some Empiric and Nonparametric Copula Models |
| corTest | Robust Tests for Equal Correlation |
| corto | Inference of Gene Regulatory Networks |
| corTools | Tools for processing data after a Genome Wide Association Study |
| corx | Create and Format Correlation Matrices |
| cosa | Bound Constrained Optimal Sample Allocation |
| COSINE | COndition SpecIfic sub-NEtwork |
| cosinor | Tools for estimating and predicting the cosinor model |
| cosinor2 | Extended Tools for Cosinor Analysis of Rhythms |
| cosmoFns | Functions for cosmological distances, times, luminosities, etc |
| CoSMoS | Complete Stochastic Modelling Solution |
| cosso | Fit Regularized Nonparametric Regression Models Using COSSO Penalty |
| COST | Copula-Based Semiparametric Models for Spatio-Temporal Data |
| costat | Time Series Costationarity Determination |
| costsensitive | Cost-Sensitive Multi-Class Classification |
| CosW | The CosW Distribution |
| cotram | Count Transformation Models |
| cotrend | Consistent Co-Trending Rank Selection |
| couchDB | Connect to and Work with CouchDB Databases |
| COUNT | Functions, Data and Code for Count Data |
| countcolors | Locates and Counts Pixels Within Color Range(s) in Images |
| countdata | The Beta-Binomial Test for Count Data |
| Counterfactual | Estimation and Inference Methods for Counterfactual Analysis |
| countfitteR | Comprehensive Automatized Evaluation of Distribution Models for Count Data |
| countgmifs | Discrete Response Regression for High-Dimensional Data |
| countHMM | Penalized Estimation of Flexible Hidden Markov Models for Time Series of Counts |
| Countr | Flexible Univariate Count Models Based on Renewal Processes |
| countrycode | Convert Country Names and Country Codes |
| CountsEPPM | Mean and Variance Modeling of Count Data |
| countToFPKM | Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM) |
| countTransformers | Transform Counts in RNA-Seq Data Analysis |
| countyfloods | Quantify United States County-Level Flood Measurements |
| countytimezones | Convert from UTC to Local Time for United States Counties |
| countyweather | Compiles Meterological Data for U.S. Counties |
| COUSCOus | A Residue-Residue Contact Detecting Method |
| covafillr | Local Polynomial Regression of State Dependent Covariates in State-Space Models |
| covatest | Tests on Properties of Space-Time Covariance Functions |
| covBM | Brownian Motion Processes for 'nlme'-Models |
| CovCombR | Combine Partial Covariance / Relationship Matrices |
| coveffectsplot | Produce Forest Plots to Visualize Covariate Effects |
| covequal | Test for Equality of Covariance Matrices |
| covfefe | Covfefy Any Word, Sentence or Speech |
| covglasso | Sparse Covariance Matrix Estimation |
| COVID19 | R Interface to COVID-19 Data Hub |
| covid19.analytics | Load and Analyze Live Data from the CoViD-19 Pandemic |
| covid19br | Brazilian COVID-19 Pandemic Data |
| covid19dbcand | Selected 'Drugbank' Drugs for COVID-19 Treatment Related Data in R Format |
| covid19france | Cases of COVID-19 in France |
| covid19italy | The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Italy Dataset |
| covid19jp | Japanese Covid-19 Datasets |
| covid19sf | The Covid19 San Francisco Dataset |
| covid19swiss | COVID-19 Cases in Switzerland and Principality of Liechtenstein |
| covid19us | Cases of COVID-19 in the United States |
| COVIDIBGE | Downloading, Reading and Analysing PNAD COVID19 Microdata |
| CovidMutations | Mutation Analysis Toolkit for COVID-19 (Coronavirus Disease 2019) |
| covidprobability | Estimate the Unit-Wide Probability of COVID-19 |
| covidsymptom | COVID Symptom Study Sweden Open Dataset |
| covLCA | Latent Class Models with Covariate Effects on Underlying and Measured Variables |
| covr | Test Coverage for Packages |
| covreg | A simultaneous regression model for the mean and covariance |
| covRobust | Robust Covariance Estimation via Nearest Neighbor Cleaning |
| CovSel | Model-Free Covariate Selection |
| CovSelHigh | Model-Free Covariate Selection in High Dimensions |
| covsep | Tests for Determining if the Covariance Structure of 2-Dimensional Data is Separable |
| covsim | VITA and IG Simulation for Given Covariance and Marginals |
| covTestR | Covariance Matrix Tests |
| CovTools | Statistical Tools for Covariance Analysis |
| cowbell | Performs Segmented Linear Regression on Two Independent Variables |
| cowplot | Streamlined Plot Theme and Plot Annotations for 'ggplot2' |
| cowsay | Messages, Warnings, Strings with Ascii Animals |
| coxed | Duration-Based Quantities of Interest for the Cox Proportional Hazards Model |
| CoxICPen | Variable Selection for Cox's Model with Interval-Censored Data |
| coxinterval | Cox-Type Models for Interval-Censored Data |
| coxme | Mixed Effects Cox Models |
| coxmeg | Cox Mixed-Effects Models for Genome-Wide Association Studies |
| coxphf | Cox Regression with Firth's Penalized Likelihood |
| CoxPhLb | Analyzing Right-Censored Length-Biased Data |
| coxphMIC | Sparse Estimation of Cox Proportional Hazards Models via Approximated Information Criterion |
| coxphSGD | Stochastic Gradient Descent log-Likelihood Estimation in Cox Proportional Hazards Model |
| coxphw | Weighted Estimation in Cox Regression |
| CoxPlus | Cox Regression (Proportional Hazards Model) with Multiple Causes and Mixed Effects |
| CoxR2 | R-Squared Measure Based on Partial LR Statistic, for the Cox PH Regression Model |
| coxrobust | Robust Estimation in Cox Model |
| coxrt | Cox Proportional Hazards Regression for Right-Truncated Data |
| coxsei | Fitting a CoxSEI Model |
| CP | Conditional Power Calculations |
| cp4p | Calibration Plot for Proteomics |
| cpa | Confirmatory Path Analysis through the d-sep tests |
| CPAT | Change Point Analysis Tests |
| CPBayes | Bayesian Meta Analysis for Studying Cross-Phenotype Genetic Associations |
| cpca | Methods to perform Common Principal Component Analysis (CPCA) |
| cPCG | Efficient and Customized Preconditioned Conjugate Gradient Method for Solving System of Linear Equations |
| cpd | Complex Pearson Distributions |
| CPE | Concordance Probability Estimates in Survival Analysis |
| CpGassoc | Association Between Methylation and a Phenotype of Interest |
| CpGFilter | CpG Filtering Method Based on Intra-Class Correlation Coefficients |
| cpk | Clinical Pharmacokinetics |
| cplexAPI | R Interface to C API of IBM ILOG CPLEX |
| cplm | Compound Poisson Linear Models |
| cpm | Sequential and Batch Change Detection Using Parametric and Nonparametric Methods |
| CPMCGLM | Correction of the P-Value after Multiple Coding in Generalized Linear Models |
| CPP | Composition of Probabilistic Preferences (CPP) |
| cpp11 | A C++11 Interface for R's C Interface |
| cppRouting | Fast Implementation of Dijkstra Algorithm |
| cpr | Control Polygon Reduction |
| Cprob | The Conditional Probability Function of a Competing Event |
| cprobit | Conditional Probit Model for Analysing Continuous Outcomes |
| cprr | Functions for Working with Danish CPR Numbers |
| cpss | Change-Point Detection by Sample-Splitting Methods |
| CPsurv | Nonparametric Change Point Estimation for Survival Data |
| cpsurvsim | Simulating Survival Data from Change-Point Hazard Distributions |
| cpsvote | A Toolbox for Using the CPS’s Voting and Registration Supplement |
| cpt | Classification Permutation Test |
| cptcity | 'cpt-city' Colour Gradients |
| cptec | An Interface to the 'CPTEC/INPE' API |
| cqcr | Access 'Care Quality Commission' Data |
| cqrReg | Quantile, Composite Quantile Regression and Regularized Versions |
| cquad | Conditional Maximum Likelihood for Quadratic Exponential Models for Binary Panel Data |
| CRAC | Cosmology R Analysis Code |
| cragg | Tests for Weak Instruments in R |
| cramer | Multivariate Nonparametric Cramer-Test for the Two-Sample-Problem |
| crandep | Network Analysis of Dependencies of CRAN Packages |
| crank | Completing Ranks |
| cranlike | Tools for 'CRAN'-Like Repositories |
| cranlogs | Download Logs from the 'RStudio' 'CRAN' Mirror |
| cranly | Package Directives and Collaboration Networks in CRAN |
| CRANsearcher | RStudio Addin for Searching Packages in CRAN Database Based on Keywords |
| crantastic | Various R tools for http://crantastic.org/ |
| crassmat | Conditional Random Sampling Sparse Matrices |
| crawl | Fit Continuous-Time Correlated Random Walk Models to Animal Movement Data |
| crayon | Colored Terminal Output |
| crch | Censored Regression with Conditional Heteroscedasticity |
| CREAM | Clustering of Genomic Regions Analysis Method |
| credentials | Tools for Managing SSH and Git Credentials |
| CreditMetrics | Functions for calculating the CreditMetrics risk model |
| creditmodel | Toolkit for Credit Modeling, Analysis and Visualization |
| CreditRisk | Evaluation of Credit Risk with Structural and Reduced Form Models |
| credsubs | Credible Subsets |
| credule | Credit Default Swap Functions |
| cregg | Simple Conjoint Tidying, Analysis, and Visualization |
| cRegulome | Obtain and Visualize Regulome-Gene Expression Correlations in Cancer |
| CRF | Conditional Random Fields |
| crfsuite | Conditional Random Fields for Labelling Sequential Data in Natural Language Processing |
| cricketr | Analyze Cricketers and Cricket Teams Based on ESPN Cricinfo Statsguru |
| crimCV | Group-Based Modelling of Longitudinal Data |
| crimedata | Access Crime Data from the Open Crime Database |
| crimelinkage | Statistical Methods for Crime Series Linkage |
| crimeutils | A Comprehensive Set of Functions to Clean, Analyze, and Present Crime Data |
| crisp | Fits a Model that Partitions the Covariate Space into Blocks in a Data- Adaptive Way |
| crispRdesignR | Guide Sequence Design for CRISPR/Cas9 |
| criticalpath | An Implementation of the Critical Path Method |
| CRM | Continual Reassessment Method (CRM) for Phase I Clinical Trials |
| crminer | Fetch 'Scholary' Full Text from 'Crossref' |
| crmn | CCMN and Other Normalization Methods for Metabolomics Data |
| crmPack | Object-Oriented Implementation of CRM Designs |
| crmReg | Cellwise Robust M-Regression and SPADIMO |
| crn | Downloads and Builds datasets for Climate Reference Network |
| crochet | Implementation Helper for '[' and '[<-' of Custom Matrix-Like Types |
| cromwellDashboard | A Dashboard to Visualize Scientific Workflows in 'Cromwell' |
| Cronbach | Cronbach's Alpha |
| crone | Structural Crystallography in 1d |
| cronologia | Create an HTML Vertical Timeline from a Data Frame in 'rmarkdown' and 'shiny' |
| cronR | Schedule R Scripts and Processes with the 'cron' Job Scheduler |
| crop | Graphics Cropping Tool |
| cropdatape | Open Data of Agricultural Production of Crops of Peru |
| cropDemand | Spatial Crop Water Demand for Brazil |
| CropDetectR | Crop Row Detector |
| CropScapeR | Access Cropland Data Layer Data via the 'CropScape' Web Service |
| cropZoning | Climate Crop Zoning Based in Air Temperature for Brazil |
| crossdes | Construction of Crossover Designs |
| crossmap | Apply Functions to All Combinations of List Elements |
| crossmatch | The Cross-match Test |
| Crossover | Analysis and Search of Crossover Designs |
| crossReg | Confidence intervals for crossover points of two simple regression lines |
| crossrun | Joint Distribution of Number of Crossings and Longest Run |
| crosstalk | Inter-Widget Interactivity for HTML Widgets |
| CrossVA | Verbal Autopsy Data Transformation for InSilicoVA and InterVA5 Algorithms |
| crossval | Generic Functions for Cross Validation |
| CrossValidate | Classes and Methods for Cross Validation of "Class Prediction" Algorithms |
| crosswalkr | Rename and Encode Data Frames Using External Crosswalk Files |
| crossword.r | Generating Crosswords from Word Lists |
| crov | Constrained Regression Model for an Ordinal Response and Ordinal Predictors |
| CRPClustering | Bayesian Nonparametric Chinese Restaurant Process Clustering with Entropy |
| crplyr | A 'dplyr' Interface for Crunch |
| crqa | Recurrence Quantification Analysis for Categorical and Continuous Time-Series |
| crrp | Penalized Variable Selection in Competing Risks Regression |
| crrSC | Competing risks regression for Stratified and Clustered data |
| crrstep | Stepwise Covariate Selection for the Fine & Gray Competing Risks Regression Model |
| crs | Categorical Regression Splines |
| crseEventStudy | A Robust and Powerful Test of Abnormal Stock Returns in Long-Horizon Event Studies |
| crsmeta | Extract Coordinate System Metadata |
| crsnls | Nonlinear Regression Parameters Estimation by 'CRS4HC' and 'CRS4HCe' |
| crso | Cancer Rule Set Optimization ('crso') |
| crsra | Tidying and Analyzing 'Coursera' Research Export Data |
| crtests | Classification and Regression Tests |
| CRTgeeDR | Doubly Robust Inverse Probability Weighted Augmented GEE Estimator |
| CRTSize | Sample Size Estimation Functions for Cluster Randomized Trials |
| crul | HTTP Client |
| crunch | Crunch.io Data Tools |
| crunchy | Shiny Apps on Crunch |
| cruts | Interface to Climatic Research Unit Time-Series Version 3.21 Data |
| CruzPlot | Plot Shipboard DAS Data |
| CRWRM | Changing the Reference Group without Re-Running the Model |
| CrypticIBDcheck | Identifying Cryptic Relatedness in Genetic Association Studies |
| cryst | Calculate the Relative Crystallinity of Starch by XRD and FTIR |
| csa | A Cross-Scale Analysis Tool for Model-Observation Visualization and Integration |
| csabounds | Bounds on Distributional Treatment Effect Parameters |
| csampling | Functions for Conditional Simulation in Regression-Scale Models |
| CsChange | Testing for Change in C-Statistic |
| csci | Current Status Confidence Intervals |
| CSclone | Bayesian Nonparametric Modeling in R |
| cSEM | Composite-Based Structural Equation Modeling |
| CSeqpat | Frequent Contiguous Sequential Pattern Mining of Text |
| CSESA | CRISPR-Based Salmonella Enterica Serotype Analyzer |
| CSFA | Connectivity Scores with Factor Analysis |
| cshapes | The CShapes Dataset and Utilities |
| CSMES | Cost-Sensitive Multi-Criteria Ensemble Selection for Uncertain Cost Conditions |
| csn | Closed Skew-Normal Distribution |
| csodata | Download Data from the CSO 'PxStat' API |
| csp | Correlates of State Policy Data Set in R |
| cspec | Complete Discrete Fourier Transform (DFT) and Periodogram |
| cspp | A Tool for the Correlates of State Policy Project Data |
| csppData | Data Only: The Correlates of State Policy Project Dataset |
| csrplus | Methods to Test Hypotheses on the Distribution of Spatial Point Processes |
| csSAM | csSAM - cell-specific Significance Analysis of Microarrays |
| cssTools | Cognitive Social Structure Tools |
| cstab | Selection of Number of Clusters via Normalized Clustering Instability |
| cstar | Substantive significance testing for regression estimates and marginal effects |
| CSTools | Assessing Skill of Climate Forecasts on Seasonal-to-Decadal Timescales |
| CSUV | Combined Selection and Uncertainty Visualiser (CSUV) |
| csv | Read and Write CSV Files with Selected Conventions |
| csvread | Fast Specialized CSV File Loader |
| csvy | Import and Export CSV Data with a YAML Metadata Header |
| CTAShiny | Interactive Application for Working with Contingency Tables |
| CTD | A Method for 'Connecting The Dots' in Weighted Graphs |
| ctgdist | Likert Category Distance Calculator |
| ctgt | Closed Testing with Globaltest for Pathway Analysis |
| cthreshER | Continuous Threshold Expectile Regression |
| ctl | Correlated Trait Locus Mapping |
| CTM | A Text Mining Toolkit for Chinese Document |
| ctmcd | Estimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data |
| ctmcmove | Modeling Animal Movement with Continuous-Time Discrete-Space Markov Chains |
| ctmle | Collaborative Targeted Maximum Likelihood Estimation |
| ctmm | Continuous-Time Movement Modeling |
| CTP | Closed Testing Procedure (CTP) |
| ctqr | Censored and Truncated Quantile Regression |
| ctrdata | Retrieve and Analyze Clinical Trials in Public Registers |
| ctrlGene | Assess the Stability of Candidate Housekeeping Genes |
| ctsem | Continuous Time Structural Equation Modelling |
| ctsemOMX | Continuous Time SEM - 'OpenMx' Based Functions |
| CTShiny | Interactive Document for Working with Classification Tree Analysis |
| CTShiny2 | Interactive Document for Working with Classification Tree Analysis |
| CTT | Classical Test Theory Functions |
| CTTinShiny | Shiny Interface for the CTT Package |
| CTTShiny | Classical Test Theory via Shiny |
| ctv | CRAN Task Views |
| CUB | A Class of Mixture Models for Ordinal Data |
| cubature | Adaptive Multivariate Integration over Hypercubes |
| cubelyr | A Data Cube 'dplyr' Backend |
| cubeview | View 3D Raster Cubes Interactively |
| cubfits | Codon Usage Bias Fits |
| cubing | Rubik's Cube Solving |
| Cubist | Rule- And Instance-Based Regression Modeling |
| CUFF | Charles's Utility Function using Formula |
| cultevo | Tools, Measures and Statistical Tests for Cultural Evolution |
| CUMP | Analyze Multivariate Phenotypes by Combining Univariate Results |
| cumplyr | Extends ddply to allow calculation of cumulative quantities |
| cumSeg | Change Point Detection in Genomic Sequences |
| cumstats | Cumulative Descriptive Statistics |
| cumulocityr | Client for the 'Cumulocity' API |
| cuRe | Parametric Cure Model Estimation |
| curephEM | NPMLE for Logistic-Cox Cure-Rate Model |
| curl | A Modern and Flexible Web Client for R |
| currentSurvival | Estimation of CCI and CLFS Functions |
| curry | Partial Function Application with %<%, %-<%, and %><% |
| cursr | Cursor and Terminal Manipulation |
| curstatCI | Confidence Intervals for the Current Status Model |
| curvecomp | Multiple Curve Comparisons Using Parametric Bootstrap |
| curveDepth | Tukey Curve Depth and Distance in the Space of Curves |
| curvHDR | Filtering of Flow Cytometry Samples |
| cusp | Cusp-Catastrophe Model Fitting Using Maximum Likelihood |
| CustomerScoringMetrics | Evaluation Metrics for Customer Scoring Models Depending on Binary Classifiers |
| customizedTraining | Customized Training for Lasso and Elastic-Net Regularized Generalized Linear Models |
| customsteps | Customizable Higher-Order Recipe Step Functions |
| CustosAscensor | Costs Allocation for the Installation of an Elevator |
| cusum | Cumulative Sum (CUSUM) Charts for Monitoring of Hospital Performance |
| CUSUMdesign | Compute Decision Interval and Average Run Length for CUSUM Charts |
| cutoff | Seek the Significant Cutoff Value |
| cutoffR | CUTOFF: A Spatio-temporal Imputation Method |
| cutpointr | Determine and Evaluate Optimal Cutpoints in Binary Classification Tasks |
| CutpointsOEHR | Optimal Equal-HR Method to Find Two Cutpoints for U-Shaped Relationships in Cox Model |
| cuttlefish.model | An R package to perform LPUE standardization and stock assessment of the English Channel cuttlefish stock using a two-stage biomass model |
| cvar | Compute Expected Shortfall and Value at Risk for Continuous Distributions |
| cvAUC | Cross-Validated Area Under the ROC Curve Confidence Intervals |
| CVcalibration | Estimation of the Calibration Equation with Error-in Observations |
| cvCovEst | Cross-Validated Covariance Matrix Estimation |
| cvcqv | Coefficient of Variation (CV) with Confidence Intervals (CI) |
| cvcrand | Efficient Design and Analysis of Cluster Randomized Trials |
| CVD | Color Vision Deficiencies |
| CVEK | Cross-Validated Kernel Ensemble |
| cvequality | Tests for the Equality of Coefficients of Variation from Multiple Groups |
| cvGEE | Cross-Validated Predictions from GEE |
| CVglasso | Lasso Penalized Precision Matrix Estimation |
| cvmdisc | Cramer von Mises Tests for Discrete or Grouped Distributions |
| cvmgof | Cramer-von Mises Goodness-of-Fit Tests |
| cvms | Cross-Validation for Model Selection |
| cvq2 | Calculate the predictive squared correlation coefficient |
| CVR | Canonical Variate Regression |
| CVrisk | Compute Risk Scores for Cardiovascular Diseases |
| CVST | Fast Cross-Validation via Sequential Testing |
| CVThresh | Level-Dependent Cross-Validation Thresholding |
| cvTools | Cross-validation tools for regression models |
| CVTuningCov | Regularized Estimators of Covariance Matrices with CV Tuning |
| CVXR | Disciplined Convex Optimization |
| cwbtools | Tools to Create, Modify and Manage 'CWB' Corpora |
| cwhmisc | Miscellaneous Functions for Math, Plotting, Printing, Statistics, Strings, and Tools |
| cwm | Cluster Weighted Models by EM algorithm |
| cxhull | Convex Hull |
| cxxfunplus | extend cxxfunction by saving the dynamic shared objects |
| cycleRtools | Tools for Cycling Data Analysis |
| cyclestreets | Cycle Routing and Data for Cycling Advocacy |
| cyclocomp | Cyclomatic Complexity of R Code |
| cycloids | cycloids |
| cyclomort | Survival Modeling with a Periodic Hazard Function |
| Cyclops | Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis |
| cymruservices | Query 'Team Cymru' 'IP' Address, Autonomous System Number ('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware' Hash Data Services |
| cyphid | Cycle and Phase Identification for mastication data |
| cyphr | High Level Encryption Wrappers |
| cystiSim | Agent-Based Model for Taenia_solium Transmission and Control |
| CytobankAPI | Cytobank API Wrapper for R |
| CytobankAPIstats | Computes Signaling and Population Stats for Cytometry Data on Cytobank using 'CytobankAPI' |
| CytobankBridgeR | Bridging and Extending the CytobankAPI Package in R to the Cytobank Web Application |
| cytoDiv | Cytometric diversity indices |
| cytofan | Plot Fan Plots for Cytometry Data using 'ggplot2' |
| cytometree | Automated Cytometry Gating and Annotation |
| cytominer | Methods for Image-Based Cell Profiling |
| czechrates | Czech Interest Rates |
| czso | Use Open Data from the Czech Statistical Office in R |
| D3GB | Interactive Genome Browser with R |
| d3Network | Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R |
| D3partitionR | Interactive Charts of Nested and Hierarchical Data with 'D3.js' |
| d3plus | Seamless 'D3Plus' Integration |
| d3r | 'd3.js' Utilities for R |
| d3Tree | Create Interactive Collapsible Trees with the JavaScript 'D3' Library |
| DAAG | Data Analysis and Graphics Data and Functions |
| DAAGbio | Data Sets and Functions, for Demonstrations with Expression Arrays and Gene Sequences |
| daarem | Damped Anderson Acceleration with Epsilon Monotonicity for Accelerating EM-Like Monotone Algorithms |
| dabestr | Data Analysis using Bootstrap-Coupled Estimation |
| dabr | Database Management with R |
| DACF | Data Analysis with Ceiling and/or Floor Data |
| dad | Three-Way / Multigroup Data Analysis Through Densities |
| dadjoke | Displays a Dad Joke |
| dae | Functions Useful in the Design and ANOVA of Experiments |
| daewr | Design and Analysis of Experiments with R |
| daff | Diff, Patch and Merge for Data.frames |
| dafs | Data analysis for forensic scientists |
| dagitty | Graphical Analysis of Structural Causal Models |
| dagR | R functions for directed acyclic graphs |
| DAIME | Effects of Changing Deposition Rates |
| DAISIE | Dynamical Assembly of Islands by Speciation, Immigration and Extinction |
| DAKS | Data Analysis and Knowledge Spaces |
| DALEX | moDel Agnostic Language for Exploration and eXplanation |
| DALEXtra | Extension for 'DALEX' Package |
| DALY | The DALY Calculator - Graphical User Interface for Probabilistic DALY Calculation in R |
| dam | Data Analysis Metabolomics |
| DamiaNN | Neural Network Numerai |
| DAMisc | Dave Armstrong's Miscellaneous Functions |
| DAMOCLES | Dynamic Assembly Model of Colonization, Local Extinction and Speciation |
| damr | Interface to Drosophila Activity Monitor System Result Files |
| dams | Dams in the United States from the National Inventory of Dams (NID) |
| DandEFA | Dandelion Plot for R-Mode Exploratory Factor Analysis |
| dang | 'Dang' Associated New Goodies |
| dani | Design and Analysis of Non-Inferiority Trials |
| dann | Discriminant Adaptive Nearest Neighbor Classification |
| danstat | R Client for the Statistics Denmark Databank API |
| DAP | Discriminant Analysis via Projections |
| dapr | 'purrr'-Like Apply Functions Over Input Elements |
| daqapo | Data Quality Assessment for Process-Oriented Data |
| Dark | The Analysis of Dark Adaptation Data |
| DarkDiv | Estimating Dark Diversity and Site-Specific Species Pools |
| darksky | Tools to Work with the 'Dark Sky' 'API' |
| dartR | Importing and Analysing SNP and Silicodart Data Generated by Genome-Wide Restriction Fragment Analysis |
| darts | Statistical Tools to Analyze Your Darts Game |
| dash | An Interface to the 'dash' Ecosystem for Authoring Reactive Web Applications |
| dashboard | Interactive Data Visualization with D3.js |
| dashboardthemes | Customise the Appearance of 'shinydashboard' Applications using Themes |
| dashCoreComponents | Core Interactive UI Components for 'Dash' |
| dashHtmlComponents | Vanilla HTML Components for 'Dash' |
| dashPivottable | Interactive React-Based Pivot Tables for Dash |
| dashTable | Core Interactive Table Component for 'dash' |
| Dasst | Tools for Reading, Processing and Writing 'DSSAT' Files |
| dat | Tools for Data Manipulation |
| data.table | Extension of 'data.frame' |
| data.tree | General Purpose Hierarchical Data Structure |
| Data2LD | Functional Data Analysis with Linear Differential Equations |
| data360r | Wrapper for 'TCdata360' and 'Govdata360' API |
| DatabaseConnector | Connecting to Various Database Platforms |
| DatabaseConnectorJars | JAR Dependencies for the 'DatabaseConnector' Package |
| DatabionicSwarm | Swarm Intelligence for Self-Organized Clustering |
| DataClean | Data Cleaning |
| datacleanr | Interactive and Reproducible Data Cleaning |
| DataCombine | Tools for Easily Combining and Cleaning Data Sets |
| dataCompareR | Compare Two Data Frames and Summarise the Difference |
| datadigest | Create an Interactive Data Summary |
| datadogr | R Client for 'Datadog' API |
| DataEditR | An Interactive Editor for Viewing, Entering, Filtering & Editing Data |
| DataEntry | Make it Easier to Enter Questionnaire Data |
| DataExplorer | Automate Data Exploration and Treatment |
| dataframeexplorer | Familiarity with Dataframes Before Data Manipulation |
| dataframes2xls | Write Data Frames to Xls Files |
| datafsm | Estimating Finite State Machine Models from Data |
| DataGraph | Export Data from R so 'DataGraph' can Read it |
| DataLoader | Import Multiple File Types |
| dataMaid | A Suite of Checks for Identification of Potential Errors in a Data Frame as Part of the Data Screening Process |
| datamap | A system for mapping foreign objects to R variables and environments |
| datamart | Unified access to your data sources |
| dataMeta | Create and Append a Data Dictionary for an R Dataset |
| datamods | Modules to Import and Manipulate Data in 'Shiny' |
| datanugget | Create, Refine, and Cluster Data Nuggets |
| dataonderivatives | Easily Source Publicly Available Data on Derivatives |
| dataone | R Interface to the DataONE REST API |
| datapack | A Flexible Container to Transport and Manipulate Data and Associated Resources |
| datapackage.r | Data Package 'Frictionless Data' |
| datapasta | R Tools for Data Copy-Pasta |
| dataprep | Efficient and Flexible Data Preprocessing Tools |
| dataPreparation | Automated Data Preparation |
| dataQualityR | Performs variable level data quality checks and generates summary statistics |
| dataquieR | Data Quality in Epidemiological Research |
| dataReporter | Reproducible Data Screening Checks and Report of Possible Errors |
| dataresqc | C3S Quality Control Tools for Historical Climate Data |
| dataRetrieval | Retrieval Functions for USGS and EPA Hydrologic and Water Quality Data |
| datarium | Data Bank for Statistical Analysis and Visualization |
| datarobot | 'DataRobot' Predictive Modeling API |
| datasailr | Row by Row Data Processing Tool, Using 'DataSailr' Script |
| datasauRus | Datasets from the Datasaurus Dozen |
| dataseries | Switzerland's Data Series in One Place |
| datasets.load | Interfaces for Loading Datasets |
| datasetsICR | Datasets from the Book "An Introduction to Clustering with R" |
| DataSpaceR | Interface to 'the CAVD DataSpace' |
| dataspice | Create Lightweight Schema.org Descriptions of Data |
| DatAssim | Data Assimilation |
| datastepr | An Implementation of a SAS-Style Data Step |
| DatastreamDSWS2R | Provides a Link Between the 'Refinitiv Datastream' System and R |
| datastructures | Implementation of Core Data Structures |
| DataVisualizations | Visualizations of High-Dimensional Data |
| DataViz | Data Visualisation Using an HTML Page and 'D3.js' |
| date | Functions for Handling Dates |
| daterangepicker | Create a Shiny Date-Range Input |
| datetime | Nominal Dates, Times, and Durations |
| datetimeutils | Utilities for Dates and Times |
| datoramar | Interface to the 'Datorama' API |
| datos | Traduce al Español Varios Conjuntos de Datos de Práctica |
| datr | 'Dat' Protocol Interface |
| datrProfile | Column Profile for Tables and Datasets |
| dave | Functions for "Data Analysis in Vegetation Ecology" |
| Davies | The Davies Quantile Function |
| dawai | Discriminant Analysis with Additional Information |
| daymetr | Interface to the 'Daymet' Web Services |
| dbarts | Discrete Bayesian Additive Regression Trees Sampler |
| dbEmpLikeGOF | Goodness-of-fit and two sample comparison tests using sample entropy |
| dbEmpLikeNorm | Test for joint assessment of normality |
| DBEST | Detecting Breakpoints and Estimating Segments in Trend |
| DBfit | A Double Bootstrap Method for Analyzing Linear Models with Autoregressive Errors |
| dbflobr | Read and Write Files to SQLite Databases |
| DBGSA | methods of distance-based gene set functional enrichment analysis |
| dbhydroR | 'DBHYDRO' Hydrologic and Water Quality Data |
| DBI | R Database Interface |
| DBItest | Testing 'DBI' 'Backends' |
| dblcens | Compute the NPMLE of distribution from doubly censored data |
| dBlockmodeling | Deterministic Blockmodeling of Signed, One-Mode and Two-Mode Networks |
| dblr | Discrete Boosting Logistic Regression |
| dbmss | Distance-Based Measures of Spatial Structures |
| dbnlearn | Dynamic Bayesian Network Structure Learning, Parameter Learning and Forecasting |
| dbnR | Dynamic Bayesian Network Learning and Inference |
| dbparser | 'DrugBank' Database XML Parser |
| dbplot | Simplifies Plotting Data Inside Databases |
| dbplyr | A 'dplyr' Back End for Databases |
| dbscan | Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms |
| dbstats | Distance-Based Statistics |
| dbWebForms | Produce R Functions to Create HTML Forms Based on SQL Meta Data |
| dbx | A Fast, Easy-to-Use Database Interface |
| dc3net | Inferring Condition-Specific Networks via Differential Network Inference |
| DCA | Dynamic Correlation Analysis for High Dimensional Data |
| DCCA | Detrended Fluctuation and Detrended Cross-Correlation Analysis |
| DCchoice | Analyzing Dichotomous Choice Contingent Valuation Data |
| dccvalidator | Metadata Validation for Data Coordinating Centers |
| DCD | Differential Community Detection in Paired Biological Networks |
| DCEM | Clustering Big Data using Expectation Maximization Star (EM*) Algorithm |
| DCG | Data Cloud Geometry (DCG): Using Random Walks to Find Community Structure in Social Network Analysis |
| DCGL | Differential Co-expression Analysis and Differential Regulation Analysis of Gene Expression Microarray Data |
| dcGOR | Analysis of Ontologies and Protein Domain Annotations |
| DChaos | Chaotic Time Series Analysis |
| dChipIO | Methods for Reading dChip Files |
| DCL | Claims Reserving under the Double Chain Ladder Model |
| dclone | Data Cloning and MCMC Tools for Maximum Likelihood Methods |
| dclust | Divisive Hierarchical Clustering |
| DCluster | Functions for the Detection of Spatial Clusters of Diseases |
| DClusterm | Model-Based Detection of Disease Clusters |
| dcminfo | Information Matrix for Diagnostic Classification Models |
| dcmle | Hierarchical Models Made Easy with Data Cloning |
| dcmodify | Modify Data Using Externally Defined Modification Rules |
| DCODE | List Linear n-Peptide Constraints for Overlapping Protein Regions |
| dcov | A Fast Implementation of Distance Covariance |
| dCovTS | Distance Covariance and Correlation for Time Series Analysis |
| DCPO | Dynamic Comparative Public Opinion |
| dCUR | Dimension Reduction with Dynamic CUR |
| dcurver | Utility Functions for Davidian Curves |
| dcv | Conventional Cross-validation statistics for climate-growth model |
| ddalpha | Depth-Based Classification and Calculation of Data Depth |
| DDD | Diversity-Dependent Diversification |
| dde | Solve Delay Differential Equations |
| DDHFm | Variance Stabilization by Data-Driven Haar-Fisz (for Microarrays) |
| ddi | The Data Defect Index for Samples that May not be IID |
| ddiv | Data Driven I-v Feature Extraction |
| DDIwR | DDI with R |
| DDM | Death Registration Coverage Estimation |
| DDoutlier | Distance & Density-Based Outlier Detection |
| ddp | Desirable Dietary Pattern |
| ddpca | Diagonally Dominant Principal Component Analysis |
| ddpcr | Analysis and Visualization of Droplet Digital PCR in R and on the Web |
| DDPNA | Disease-Drived Differential Proteins Co-Expression Network Analysis |
| DDRTree | Learning Principal Graphs with DDRTree |
| ddsPLS | Data-Driven Sparse Partial Least Squares Robust to Missing Samples for Mono and Multi-Block Data Sets |
| ddst | Data Driven Smooth Tests |
| deadband | Statistical Deadband Algorithms Comparison |
| deal | Learning Bayesian Networks with Mixed Variables |
| DealGPL570 | Dealing GPL570 RAW.tar file |
| deamer | Deconvolution density estimation with adaptive methods for a variable prone to measurement error |
| deaR | Conventional and Fuzzy Data Envelopment Analysis |
| debar | A Post-Clustering Denoiser for COI-5P Barcode Data |
| deBInfer | Bayesian Inference for Differential Equations |
| debugme | Debug R Packages |
| debugr | Debug Tool to Watch Objects/Expressions While Running an R Script |
| DeCAFS | Detecting Changes in Autocorrelated and Fluctuating Signals |
| DECIDE | DEComposition of Indirect and Direct Effects |
| decido | Bindings for 'Mapbox' Ear Cutting Triangulation Library |
| decision | Statistical Decision Analysis |
| decisionSupport | Quantitative Support of Decision Making under Uncertainty |
| deckgl | An R Interface to 'deck.gl' |
| DeclareDesign | Declare and Diagnose Research Designs |
| decode | Differential Co-Expression and Differential Expression Analysis |
| decoder | Decode Coded Variables to Plain Text and the Other Way Around |
| decomposedPSF | Time Series Prediction with PSF and Decomposition Methods (EMD and EEMD) |
| DecomposeR | Empirical Mode Decomposition for Cyclostratigraphy |
| decompr | Global-Value-Chain Decomposition |
| decon | Deconvolution Estimation in Measurement Error Models |
| deconstructSigs | Identifies Signatures Present in a Tumor Sample |
| deconvolveR | Empirical Bayes Estimation Strategies |
| decor | Retrieve Code Decorations |
| DecorateR | Fit and Deploy DECORATE Trees |
| Deducer | A Data Analysis GUI for R |
| DeducerPlugInExample | Deducer Plug-in Example |
| DeducerPlugInScaling | Reliability and factor analysis plugin |
| DeducerSpatial | Deducer for spatial data analysis |
| DeducerSurvival | Add Survival Dialogue to Deducer |
| DeducerText | Deducer GUI for Text Data |
| deducorrect | Deductive Correction, Deductive Imputation, and Deterministic Correction |
| deductive | Data Correction and Imputation Using Deductive Methods |
| deep | A Neural Networks Framework |
| deepboost | Deep Boosting Ensemble Modeling |
| deepdep | Visualise and Explore the Deep Dependencies of R Packages |
| deepdive | Deep Learning for General Purpose |
| deepgmm | Deep Gaussian Mixture Models |
| deepgp | Sequential Design for Deep Gaussian Processes using MCMC |
| deepMOU | Clustering of Short Texts by Mixture of Unigrams and Its Deep Extensions |
| deepnet | deep learning toolkit in R |
| deepNN | Deep Learning |
| DEEPR | Dirichlet-multinomial Evolutionary Event Profile Randomization (DEEPR) test |
| deepredeff | Deep Learning Prediction of Effectors |
| DEEVD | Density Estimation by Extreme Value Distributions |
| default | Change the Default Arguments in R Functions |
| define | Create FDA-Style Data and Program Definitions |
| deflateBR | Deflate Nominal Brazilian Reais |
| deformula | Integration of One-Dimensional Functions with Double Exponential Formulas |
| deGradInfer | Parameter Inference for Systems of Differential Equation |
| degreenet | Models for Skewed Count Distributions Relevant to Networks |
| deisotoper | Detection of Isotope Pattern of a Mass Spectrometric Measurement |
| dejaVu | Multiple Imputation for Recurrent Events |
| Delaporte | Statistical Functions for the Delaporte Distribution |
| delayed | A Framework for Parallelizing Dependent Tasks |
| DelayedEffect.Design | Sample Size and Power Calculations using the APPLE and SEPPLE Methods |
| deldir | Delaunay Triangulation and Dirichlet (Voronoi) Tessellation |
| DeLorean | Estimates Pseudotimes for Single Cell Expression Data |
| delt | Estimation of Multivariate Densities Using Adaptive Partitions |
| Delta | Measure of Agreement Between Two Raters |
| deltaPlotR | Identification of Dichotomous Differential Item Functioning (DIF) using Angoff's Delta Plot Method |
| deltar | Calculation of Delta R Values |
| DELTD | Kernel Density Estimation using Lifetime Distributions |
| dematel | Decision Making Trial and Evaluation Laboratory Technique in R |
| Demerelate | Functions to Calculate Relatedness on Diploid Genetic Data |
| deming | Deming, Theil-Sen, Passing-Bablock and Total Least Squares Regression |
| DemoDecomp | Decompose Demographic Functions |
| demogR | Analysis of Age-Structured Demographic Models |
| DemografixeR | Extrapolate Gender, Age and Nationality of a Name |
| demoGraphic | Providing Demographic Table with the P-Value, Standardized Mean Difference Value |
| demography | Forecasting Mortality, Fertility, Migration and Population Data |
| demoKde | Kernel Density Estimation for Demonstration Purposes |
| demoShiny | Runs a 'Shiny' App as Demo or Lists All Demo 'Shiny' Apps |
| DEMOVA | DEvelopment (of Multi-Linear QSPR/QSAR) MOdels VAlidated using Test Set |
| demu | Optimal Design Emulators via Point Processes |
| dendextend | Extending 'dendrogram' Functionality in R |
| dendRoAnalyst | A Tool for Processing and Analyzing Dendrometer Data |
| dendroextras | Extra Functions to Cut, Label and Colour Dendrogram Clusters |
| dendrometeR | Analyzing Dendrometer Data |
| DendroSync | A Set of Tools for Calculating Spatial Synchrony Between Tree-Ring Chronologies |
| dendroTools | Linear and Nonlinear Methods for Analyzing Daily and Monthly Dendroclimatological Data |
| DendSer | Dendrogram seriation: ordering for visualisation |
| dendsort | Modular Leaf Ordering Methods for Dendrogram Nodes |
| DengueRT | Parameter Estimates and Real-Time Prediction of a Single Dengue Outbreak |
| denoiSeq | Differential Expression Analysis Using a Bottom-Up Model |
| denoiseR | Regularized Low Rank Matrix Estimation |
| denovolyzeR | Statistical Analyses of De Novo Genetic Variants |
| denpro | Visualization of Multivariate Functions, Sets, and Data |
| denseFLMM | Functional Linear Mixed Models for Densely Sampled Data |
| densEstBayes | Density Estimation via Bayesian Inference Engines |
| densitr | Analysing Density Profiles from Resistance Drilling of Trees |
| Density.T.HoldOut | Density.T.HoldOut: Non-combinatorial T-estimation Hold-Out for density estimation |
| densityClust | Clustering by Fast Search and Find of Density Peaks |
| DensParcorr | Dens-Based Method for Partial Correlation Estimation in Large Scale Brain Networks |
| densratio | Density Ratio Estimation |
| denstrip | Density Strips and Other Methods for Compactly Illustrating Distributions |
| denvax | Simple Dengue Test and Vaccinate Cost Thresholds |
| DEoptim | Global Optimization by Differential Evolution |
| DEoptimR | Differential Evolution Optimization in Pure R |
| depcoeff | Dependency Coefficients |
| depend.truncation | Statistical Methods for the Analysis of Dependently Truncated Data |
| depigner | A Utility Package to Help you Deal with "Pignas" |
| DepLogo | Dependency Logo |
| DEploid | Deconvolute Mixed Genomes with Unknown Proportions |
| depmix | Dependent Mixture Models |
| depmixS4 | Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4 |
| DEPONS2R | Read, Plot and Analyse Output from the DEPONS Model |
| depth | Nonparametric Depth Functions for Multivariate Analysis |
| depth.plot | Multivariate Analogy of Quantiles |
| DepthProc | Statistical Depth Functions for Multivariate Analysis |
| depthTools | Depth Tools Package |
| dequer | Stacks, Queues, and 'Deques' for R |
| DeRezende.Ferreira | Zero Coupon Yield Curve Modelling |
| Deriv | Symbolic Differentiation |
| derivmkts | Functions and R Code to Accompany Derivatives Markets |
| DES | Discrete Event Simulation |
| desc | Manipulate DESCRIPTION Files |
| descomponer | Seasonal Adjustment by Frequency Analysis |
| descr | Descriptive Statistics |
| describedata | Miscellaneous Descriptive Functions |
| DescribeDisplay | An Interface to the 'DescribeDisplay' 'GGobi' Plugin |
| describer | Describe Data in R Using Common Descriptive Statistics |
| DescriptiveStats.OBeu | Descriptive Statistics 'OpenBudgets.eu' |
| descriptr | Generate Descriptive Statistics |
| DescrTab2 | Publication Quality Descriptive Statistics Tables |
| descstat | Tools for Descriptive Statistics |
| descstatsr | Descriptive Univariate Statistics |
| desctable | Produce Descriptive and Comparative Tables Easily |
| DescTools | Tools for Descriptive Statistics |
| DescToolsAddIns | Interactive Functions to be Used as Shortcuts in 'RStudio' |
| deseasonalize | Optimal deseasonalization for geophysical time series using AR fitting |
| designGG | Computational tool for designing genetical genomics experiments |
| DesignLibrary | Library of Research Designs |
| designmatch | Matched Samples that are Balanced and Representative by Design |
| designr | Balanced Factorial Designs |
| desiR | Desirability Functions for Ranking, Selecting, and Integrating Data |
| desirability | Function Optimization and Ranking via Desirability Functions |
| desire | Desirability functions in R |
| DESnowball | Bagging with Distance-based Regression for Differential Gene Expression Analyses |
| deSolve | Solvers for Initial Value Problems of Differential Equations ('ODE', 'DAE', 'DDE') |
| desplot | Plotting Field Plans for Agricultural Experiments |
| DET | Representation of DET Curve with Confidence Intervals |
| details | Create Details HTML Tag for Markdown and Package Documentation |
| detect | Analyzing Wildlife Data with Detection Error |
| detector | Detect Data Containing Personally Identifiable Information |
| detectR | Change Point Detection |
| detectRUNS | Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes |
| detectseparation | Detect and Check for Separation and Infinite Maximum Likelihood Estimates |
| deTestSet | Test Set for Differential Equations |
| DetLifeInsurance | Life Insurance Premium and Reserves Valuation |
| DetMCD | Implementation of the DetMCD Algorithm (Robust and Deterministic Estimation of Location and Scatter) |
| detpack | Density Estimation and Random Number Generation with Distribution Element Trees |
| DetR | Suite of Deterministic and Robust Algorithms for Linear Regression |
| detrendeR | Start the detrendeR Graphical User Interface (GUI) |
| detrendr | Detrend Images |
| deTS | Tissue-Specific Enrichment Analysis |
| DetSel | A Computer Program to Detect Markers Responding to Selection |
| detzrcr | Compare Detrital Zircon Suites |
| devEMF | EMF Graphics Output Device |
| devFunc | Clear and Condense Argument Check for User-Defined Functions |
| devoid | A Graphic Device that Does Nothing |
| Devore7 | Data sets from Devore's "Prob and Stat for Eng (7th ed)" |
| devRate | Quantify the Relationship Between Development Rate and Temperature in Ectotherms |
| devtools | Tools to Make Developing R Packages Easier |
| DevTreatRules | Develop Treatment Rules with Observational Data |
| dexter | Data Management and Analysis of Tests |
| dextergui | A Graphical User Interface for Dexter |
| dexterMST | CML and Bayesian Calibration of Multistage Tests |
| DFA | Detrended Fluctuation Analysis |
| DFA.CANCOR | Linear Discriminant Function and Canonical Correlation Analysis |
| dfadjust | Degrees of Freedom Adjustment for Robust Standard Errors |
| dfcomb | Phase I/II Adaptive Dose-Finding Design for Combination Studies |
| dfCompare | Compare Two Dataframes and Return Adds, Changes, and Deletes |
| dfConn | Dynamic Functional Connectivity Analysis |
| dfcrm | Dose-Finding by the Continual Reassessment Method |
| dfexplore | Explore data.frames by plotting NA and classes of each variable |
| dfidx | Indexed Data Frames |
| DFIT | Differential Functioning of Items and Tests |
| dfmeta | Meta-Analysis of Phase I Dose-Finding Early Clinical Trials |
| dfmta | Phase I/II Adaptive Dose-Finding Design for MTA |
| dfoliatR | Detection and Analysis of Insect Defoliation Signals in Tree Rings |
| dfoptim | Derivative-Free Optimization |
| Dforest | Decision Forest |
| dformula | Data Manipulation using Formula |
| dfped | Extrapolation and Bridging of Adult Information in Early Phase Dose-Finding Paediatrics Studies |
| dfphase1 | Phase I Control Charts (with Emphasis on Distribution-Free Methods) |
| dfpk | Bayesian Dose-Finding Designs using Pharmacokinetics (PK) for Phase I Clinical Trials |
| dfrr | Dichotomized Functional Response Regression |
| dfvad | Diewert and Fox's Method of Value Added Growth Decomposition |
| dga | Capture-Recapture Estimation using Bayesian Model Averaging |
| dGAselID | Genetic Algorithm with Incomplete Dominance for Feature Selection |
| DGCA | Differential Gene Correlation Analysis |
| DGEobj | Differential Gene Expression (DGE) Analysis Results Data Object |
| dglars | Differential Geometric Least Angle Regression |
| dglm | Double Generalized Linear Models |
| DGLMExtPois | Double Generalized Linear Models Extending Poisson Regression |
| dgodata | Data for the 'dgo' Package |
| dgof | Discrete Goodness-of-Fit Tests |
| dgumbel | The Gumbel Distribution Functions and Gradients |
| DGVM3D | 3D Forest Simulation Visualization Tool |
| DHARMa | Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models |
| DHBins | Hexmaps for NZ District Health Boards |
| dhga | Differential Hub Gene Analysis |
| dhglm | Double Hierarchical Generalized Linear Models |
| dhh | A Heavy-Headed Distribution |
| dhReg | Dynamic Harmonic Regression |
| DHS.rates | Calculates Demographic Indicators |
| dHSIC | Independence Testing via Hilbert Schmidt Independence Criterion |
| di | Deficit Index (DI) |
| diagis | Diagnostic Plot and Multivariate Summary Statistics of Weighted Samples from Importance Sampling |
| diagmeta | Meta-Analysis of Diagnostic Accuracy Studies with Several Cutpoints |
| diagonals | Block Diagonal Extraction or Replacement |
| diagram | Functions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams |
| DiagrammeR | Graph/Network Visualization |
| DiagrammeRsvg | Export DiagrammeR Graphviz Graphs as SVG |
| dialr | Parse, Format, and Validate International Phone Numbers |
| dialrjars | Required 'libphonenumber' jars for the 'dialr' Package |
| dials | Tools for Creating Tuning Parameter Values |
| diaplt | Beads Summary Plot of Ranges |
| diathor | Calculate Ecological Information and Diatom Based Indices |
| dice | Calculate probabilities of various dice-rolling events |
| DiceDesign | Designs of Computer Experiments |
| DiceEval | Construction and Evaluation of Metamodels |
| DiceKriging | Kriging Methods for Computer Experiments |
| DiceOptim | Kriging-Based Optimization for Computer Experiments |
| diceR | Diverse Cluster Ensemble in R |
| DiceView | Methods for Visualization of Computer Experiments Design and Surrogate |
| dichromat | Color Schemes for Dichromats |
| dicionariosIBGE | Dictionaries for reading microdata surveys from IBGE |
| DICOMread | Reading and Saving DICOM Image Files |
| DIconvex | Finding Patterns of Monotonicity and Convexity in Data |
| Dict | R6 Based Key-Value Dictionary Implementation |
| did | Treatment Effects with Multiple Periods and Groups |
| DidacticBoost | A Simple Implementation and Demonstration of Gradient Boosting |
| Diderot | Bibliographic Network Analysis |
| DIDmultiplegt | Estimation in DID with Multiple Groups and Periods |
| didrooRFM | Compute Recency Frequency Monetary Scores for your Customer Data |
| dief | Metrics for Continuous Efficiency |
| dielectric | Defines some physical constants and dielectric functions commonly used in optics, plasmonics |
| dietr | Diet Estimated Trophic Levels |
| diezeit | R Interface to the ZEIT ONLINE Content API |
| DIFboost | Detection of Differential Item Functioning (DIF) in Rasch Models by Boosting Techniques |
| difconet | Differential Coexpressed Networks |
| diffcor | Fisher's z-Tests Concerning Difference of Correlations |
| DiffCorr | Analyzing and Visualizing Differential Correlation Networks in Biological Data |
| diffdepprop | Calculates Confidence Intervals for two Dependent Proportions |
| diffdf | Dataframe Difference Tool |
| diffee | Fast and Scalable Learning of Sparse Changes in High-Dimensional Gaussian Graphical Model Structure |
| diffEnrich | Given a List of Gene Symbols, Performs Differential Enrichment Analysis |
| diffeqr | Solving Differential Equations (ODEs, SDEs, DDEs, DAEs) |
| diffeR | Metrics of Difference for Comparing Pairs of Maps or Pairs of Variables |
| diffIRT | Diffusion IRT Models for Response and Response Time Data |
| diffman | Detect Differentiation Problems |
| diffMeshGP | Multi-Fidelity Computer Experiments Using the Tuo-Wu-Yu Model |
| DiffNet | Detection of Statistically Significant Changes in Complex Biological Networks |
| diffobj | Diffs for R Objects |
| diffpriv | Easy Differential Privacy |
| diffr | Display Differences Between Two Files using Codediff Library |
| diffusion | Forecast the Diffusion of New Products |
| diffusionMap | Diffusion Map |
| DiffusionRgqd | Inference and Analysis for Generalized Quadratic Diffusions |
| DiffusionRimp | Inference and Analysis for Diffusion Processes via Data Imputation and Method of Lines |
| DiffusionRjgqd | Inference and Analysis for Jump Generalized Quadratic Diffusions |
| diffusr | Network Diffusion Algorithms |
| diffviewer | HTML Widget to Show File Differences |
| DiffXTables | Pattern Analysis Across Contingency Tables |
| DIFlasso | A Penalty Approach to Differential Item Functioning in Rasch Models |
| difNLR | DIF and DDF Detection by Non-Linear Regression Models |
| DIFplus | Multilevel Mantel-Haenszel Statistics for Differential Item Functioning Detection |
| difR | Collection of Methods to Detect Dichotomous Differential Item Functioning (DIF) |
| DIFshiny | Differential Item Functioning via Shiny Application |
| DIFtree | Item Focussed Trees for the Identification of Items in Differential Item Functioning |
| digest | Create Compact Hash Digests of R Objects |
| digitalPCR | Estimate Copy Number for Digital PCR |
| digitize | Use Data from Published Plots in R |
| dils | Data-Informed Link Strength. Combine multiple-relationship networks into a single weighted network. Impute (fill-in) missing network links |
| DIME | DIME (Differential Identification using Mixture Ensemble) |
| dimensionsR | Gathering Bibliographic Records from 'Digital Science Dimensions' Using 'DSL' API |
| DImodels | Diversity-Interactions (DI) Models |
| DIMORA | Diffusion Models R Analysis |
| dimRed | A Framework for Dimensionality Reduction |
| dina | Bayesian Estimation of DINA Model |
| dinamic | DiNAMIC A Method To Analyze Recurrent DNA Copy Number Aberrations in Tumors |
| dineq | Decomposition of (Income) Inequality |
| dint | A Toolkit for Year-Quarter, Year-Month and Year-Isoweek Dates |
| DiPALM | Differential Pattern Analysis via Linear Modeling |
| DiPhiSeq | Robust Tests for Differential Dispersion and Differential Expression in RNA-Sequencing Data |
| diproperm | Conduct Direction-Projection-Permutation Tests and Display Plots |
| DiPs | Directional Penalties for Optimal Matching in Observational Studies |
| dipsaus | A Dipping Sauce for Data Analysis and Visualizations |
| diptest | Hartigan's Dip Test Statistic for Unimodality - Corrected |
| dipw | Debiased Inverse Propensity Score Weighting |
| DIRECT | Bayesian Clustering of Multivariate Data Under the Dirichlet-Process Prior |
| DirectedClustering | Directed Weighted Clustering Coefficient |
| DirectEffects | Estimating Controlled Direct Effects for Explaining Causal Findings |
| Directional | A Collection of R Functions for Directional Data Analysis |
| directlabels | Direct Labels for Multicolor Plots |
| directotree | Creates an Interactive Tree Structure of a Directory |
| directPA | Direction Analysis for Pathways and Kinases |
| DirectStandardisation | Adjusted Means and Proportions by Direct Standardisation |
| dirichletprocess | Build Dirichlet Process Objects for Bayesian Modelling |
| DirichletReg | Dirichlet Regression in R |
| dirmcmc | Directional Metropolis Hastings Algorithm |
| dirmult | Estimation in Dirichlet-Multinomial distribution |
| DirStats | Nonparametric Methods for Directional Data |
| disaggR | Two-Steps Benchmarks for Time Series Disaggregation |
| disaggregation | Disaggregation Modelling |
| disastr.api | Wrapper for the UN OCHA ReliefWeb Disaster Events API |
| DIscBIO | A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics |
| discfrail | Cox Models for Time-to-Event Data with Nonparametric Discrete Group-Specific Frailties |
| discgolf | Discourse API Client |
| discharge | Fourier Analysis of Discharge Data |
| disclap | Discrete Laplace Exponential Family |
| disclapmix | Discrete Laplace Mixture Inference using the EM Algorithm |
| discnorm | Test for Discretized Normality in Ordinal Data |
| disco | Discordance and Concordance of Transcriptomic Responses |
| discord | Functions for Discordant Kinship Modeling |
| discourseGT | Analyze Group Patterns using Graph Theory in Educational Settings |
| discoveR | Exploratory Data Analysis System |
| discoverableresearch | Checks Title, Abstract and Keywords to Optimise Discoverability |
| discretecdAlgorithm | Coordinate-Descent Algorithm for Learning Sparse Discrete Bayesian Networks |
| DiscreteFDR | Multiple Testing Procedures with Adaptation for Discrete Tests |
| DiscreteInverseWeibull | Discrete Inverse Weibull Distribution |
| DiscreteLaplace | Discrete Laplace Distributions |
| discreteMTP | Multiple testing procedures for discrete test statistics |
| DiscreteQvalue | Improved q-Values for Discrete Uniform and Homogeneous Tests |
| discreteRV | Create and Manipulate Discrete Random Variables |
| DiscreteWeibull | Discrete Weibull Distributions (Type 1 and 3) |
| discretization | Data preprocessing, discretization for classification |
| discrim | Model Wrappers for Discriminant Analysis |
| DiscriMiner | Tools of the Trade for Discriminant Analysis |
| discSurv | Discrete Time Survival Analysis |
| disdat | Data for Comparing Species Distribution Modeling Methods |
| diseasemapping | Modelling Spatial Variation in Disease Risk for Areal Data |
| diseq | Estimation Methods for Markets in Equilibrium and Disequilibrium |
| Disequilibrium | Disequilibrium Models |
| DisHet | Estimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples |
| DisimForMixed | Calculate Dissimilarity Matrix for Dataset with Mixed Attributes |
| DisImpact | Calculates Disproportionate Impact When Binary Success Data are Disaggregated by Subgroups |
| disk.frame | Larger-than-RAM Disk-Based Data Manipulation Framework |
| diskImageR | A Pipeline to Analyze Resistance and Tolerance from Drug Disk Diffusion Assays |
| dismo | Species Distribution Modeling |
| disparityfilter | Disparity Filter Algorithm for Weighted Networks |
| displayHTS | displayHTS |
| dispmod | Modelling Dispersion in GLM |
| disposables | Create Disposable R Packages for Testing |
| dispRity | Measuring Disparity |
| dissever | Spatial Downscaling using the Dissever Algorithm |
| DiSSMod | Fitting Sample Selection Models for Discrete Response Variables |
| dissUtils | Utilities for making pairwise comparisons of multivariate data |
| Distance | Distance Sampling Detection Function and Abundance Estimation |
| distance.sample.size | Calculates Study Size Required for Distance Sampling |
| distances | Tools for Distance Metrics |
| distantia | Assessing Dissimilarity Between Multivariate Time Series |
| DistatisR | DiSTATIS Three Way Metric Multidimensional Scaling |
| distcomp | Computations over Distributed Data without Aggregation |
| distcrete | Discrete Distribution Approximations |
| distdichoR | Distributional Method for the Dichotomisation of Continuous Outcomes |
| distdrawr | Download Occurrence Data of Vascular Plants in Germany from the FLORKART Database |
| distfree.cr | Distribution-Free Confidence Region |
| distill | 'R Markdown' Format for Scientific and Technical Writing |
| distillery | Method Functions for Confidence Intervals and to Distill Information from an Object |
| disto | Unified Interface to Distance, Dissimilarity, Similarity Matrices |
| distory | Distance Between Phylogenetic Histories |
| distr | Object Oriented Implementation of Distributions |
| distr6 | The Complete R6 Probability Distributions Interface |
| distrDoc | Documentation for 'distr' Family of R Packages |
| distreg.vis | Framework for the Visualization of Distributional Regression Models |
| distrEllipse | S4 Classes for Elliptically Contoured Distributions |
| distrEx | Extensions of Package 'distr' |
| DISTRIB | Four Essential Functions for Statistical Distributions Analysis: A New Functional Approach |
| Distributacalcul | Probability Distribution Functions |
| distributional | Vectorised Probability Distributions |
| DistributionFitR | Fitting Multiple Parametric Distributions |
| DistributionOptimization | Distribution Optimization |
| distributions3 | Probability Distributions as S3 Objects |
| distributionsrd | Distribution Fitting and Evaluation |
| DistributionTest | Powerful Goodness-of-Fit Tests Based on the Likelihood Ratio |
| DistributionUtils | Distribution Utilities |
| distrMod | Object Oriented Implementation of Probability Models |
| distro | Linux Distribution Properties |
| distrom | Distributed Multinomial Regression |
| distrr | Estimate and Manage Empirical Distributions |
| distrRmetrics | Distribution Classes for Distributions from Rmetrics |
| distrSim | Simulation Classes Based on Package 'distr' |
| distrTeach | Extensions of Package 'distr' for Teaching Stochastics/Statistics in Secondary School |
| distrTEst | Estimation and Testing Classes Based on Package 'distr' |
| distTails | A Collection of Full Defined Distribution Tails |
| disttools | Distance Object Manipulation Tools |
| dittodb | A Test Environment for Database Requests |
| DivE | Diversity Estimator |
| diverge | Evolutionary Trait Divergence Between Sister Species and Other Paired Lineages |
| diverse | Diversity Measures for Complex Systems |
| DiversificationR | Econometric Tools to Measure Portfolio Diversification |
| diversitree | Comparative 'Phylogenetic' Analyses of Diversification |
| diveRsity | A Comprehensive, General Purpose Population Genetics Analysis Package |
| diversityForest | Diversity Forests |
| DiversityOccupancy | Building Diversity Models from Multiple Species Occupancy Models |
| divest | Get Images Out of DICOM Format Quickly |
| divo | Tools for Analysis of Diversity and Similarity in Biological Systems |
| dixon | Nearest Neighbour Contingency Table Analysis |
| dixonTest | Dixon's Ratio Test for Outlier Detection |
| diyar | Multistage Record Linkage and Case Definition for Epidemiological Analysis |
| DIZutils | Utilities for 'DIZ' R Package Development |
| DJL | Distance Measure Based Judgment and Learning |
| dkanr | Client for the 'DKAN' API |
| dkDNA | Diffusion Kernels on a Set of Genotypes |
| dLagM | Time Series Regression Models with Distributed Lag Models |
| DLASSO | Implementation of Adaptive or Non-Adaptive Differentiable Lasso and SCAD Penalties in Linear Models |
| dlbayes | Use Dirichlet Laplace Prior to Solve Linear Regression Problem and Do Variable Selection |
| dlib | Allow Access to the 'Dlib' C++ Library |
| dlm | Bayesian and Likelihood Analysis of Dynamic Linear Models |
| DLMtool | Data-Limited Methods Toolkit |
| dlnm | Distributed Lag Non-Linear Models |
| dlookr | Tools for Data Diagnosis, Exploration, Transformation |
| dlsem | Distributed-Lag Linear Structural Equation Models |
| dlstats | Download Stats of R Packages |
| dm | Relational Data Models |
| dma | Dynamic Model Averaging |
| dmacs | Measurement Nonequivalence Effect Size Calculator |
| dmai | Divisia Monetary Aggregates Index |
| dmbc | Model Based Clustering of Binary Dissimilarity Measurements |
| DMCfun | Diffusion Model of Conflict (DMC) in Reaction Time Tasks |
| dmdScheme | Domain Specific MetaData Scheme |
| dml | Distance Metric Learning in R |
| dmm | Dyadic Mixed Model for Pedigree Data |
| DMMF | Daily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model |
| dMod | Dynamic Modeling and Parameter Estimation in ODE Models |
| DMRMark | DMR Detection by Non-Homogeneous Hidden Markov Model from Methylation Array Data |
| DMRnet | Delete or Merge Regressors Algorithms for Linear and Logistic Model Selection and High-Dimensional Data |
| dmt | Dependency Modeling Toolkit |
| DMTL | Tools for Applying Distribution Mapping Based Transfer Learning |
| dmtools | Tools for Clinical Data Management |
| dmutate | Mutate Data Frames with Random Variates |
| DMwR | Functions and data for "Data Mining with R" |
| DMwR2 | Functions and Data for the Second Edition of "Data Mining with R" |
| dna | Differential Network Analysis |
| dnapath | Differential Network Analysis using Gene Pathways |
| DNAseqtest | Generating and Testing DNA Sequences |
| DNAtools | Tools for Analysing Forensic Genetic DNA Data |
| DnE | Distribution and Equation |
| dnet | Integrative Analysis of Omics Data in Terms of Network, Evolution and Ontology |
| dng | Distributions and Gradients |
| DNLC | Differential Network Local Consistency Analysis |
| DNMF | Discriminant Non-Negative Matrix Factorization |
| dnr | Simulate Dynamic Networks using Exponential Random Graph Models (ERGM) Family |
| do | Data Operator |
| DOBAD | Analysis of Discretely Observed Linear Birth-and-Death(-and-Immigration) Markov Chains |
| dobin | Dimension Reduction for Outlier Detection |
| dobson | Data from the GLM Book by Dobson and Barnett |
| doBy | Groupwise Statistics, LSmeans, Linear Contrasts, Utilities |
| doc2concrete | Measuring Concreteness in Natural Language |
| doc2vec | Distributed Representations of Sentences and Documents |
| docdescriptR | Automatic Reporter for Descriptive Analysis |
| docinfeR | Automatic Reporter for Inference Analysis |
| dockerfiler | Easy Dockerfile Creation from R |
| docknitr | Use Docker Images to Process Rmarkdown Blocks |
| docopt | Command-Line Interface Specification Language |
| docopulae | Optimal Designs for Copula Models |
| docstring | Provides Docstring Capabilities to R Functions |
| documair | Automatic Documentation for R packages |
| document | Run 'roxygen2' on (Chunks of) Single Code Files |
| documenter | Documents Files |
| docuSignr | Connect to 'DocuSign' API |
| docxtools | Tools for R Markdown to Docx Documents |
| docxtractr | Extract Data Tables and Comments from 'Microsoft' 'Word' Documents |
| Dodge | Acceptance Sampling Ideas Originated by H.F. Dodge |
| dodgr | Distances on Directed Graphs |
| DoE.base | Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages |
| DoE.MIParray | Creation of Arrays by Mixed Integer Programming |
| DoE.multi.response | Construct Multi-Response Experimental Designs |
| DoE.wrapper | Wrapper Package for Design of Experiments Functionality |
| doebioresearch | Analysis of Design of Experiments for Biological Research |
| DoEstRare | Rare Variant Association Test Based on Position Density Estimation |
| doex | The One-Way Heteroscedastic ANOVA Tests |
| doFuture | A Universal Foreach Parallel Adapter using the Future API of the 'future' Package |
| doMC | Foreach Parallel Adaptor for 'parallel' |
| Dominance | Calculate and Visualize Dominance Hierarchies |
| dominanceanalysis | Dominance Analysis |
| domino | R Console Bindings for the 'Domino Command-Line Client' |
| doMPI | Foreach Parallel Adaptor for the Rmpi Package |
| donut | Nearest Neighbour Search with Variables on a Torus |
| doParallel | Foreach Parallel Adaptor for the 'parallel' Package |
| DOPE | Drug Ontology Parsing Engine |
| doremi | Dynamics of Return to Equilibrium During Multiple Inputs |
| doRNG | Generic Reproducible Parallel Backend for 'foreach' Loops |
| DOS | Design of Observational Studies |
| DOS2 | Design of Observational Studies, Companion to the Second Edition |
| dosearch | Causal Effect Identification from Multiple Incomplete Data Sources |
| dosedesignR | Interactive Designing of Dose Finding Studies |
| DoseFinding | Planning and Analyzing Dose Finding Experiments |
| doSNOW | Foreach Parallel Adaptor for the 'snow' Package |
| dosresmeta | Multivariate Dose-Response Meta-Analysis |
| dostats | Compute Statistics Helper Functions |
| DOT | Render and Export DOT Graphs in R |
| DoTC | Distribution of Typicality Coefficients |
| dotCall64 | Enhanced Foreign Function Interface Supporting Long Vectors |
| dotdot | Enhanced Assignment Operator to Overwrite or Grow Objects |
| dotenv | Load Environment Variables from '.env' |
| dotgen | Gene-Set Analysis via Decorrelation by Orthogonal Transformation |
| dotwhisker | Dot-and-Whisker Plots of Regression Results |
| doubcens | Survivor Function Estimation for Doubly Interval-Censored Failure Time Data |
| double.truncation | Analysis of Doubly-Truncated Data |
| DoubleCone | Test Against Parametric Regression Function |
| DoubleExpSeq | Differential Exon Usage Test for RNA-Seq Data via Empirical Bayes Shrinkage of the Dispersion Parameter |
| DoubleML | Double Machine Learning in R |
| doubt | Enable Operators Containing the '?' Symbol |
| DOvalidation | Kernel Hazard Estimation with Best One-Sided and Double One-Sided Cross-Validation |
| Dowd | Functions Ported from 'MMR2' Toolbox Offered in Kevin Dowd's Book Measuring Market Risk |
| downlit | Syntax Highlighting and Automatic Linking |
| downloader | Download Files over HTTP and HTTPS |
| downloadthis | Implement Download Buttons in 'rmarkdown' |
| downscaledl | Downscale of RS Images using Deep Learning |
| downsize | A Tool to Downsize Large Workflows for Testing |
| dpa | Dynamic Path Approach |
| dparser | Port of 'Dparser' Package |
| DPBBM | Dirichlet Process Beta-Binomial Mixture |
| dpcid | Differential Partial Correlation IDentification |
| dPCP | Automated Analysis of Multiplex Digital PCR Data |
| Dpit | Distribution Pitting |
| dplR | Dendrochronology Program Library in R |
| dplRCon | Concordance for Dendroclimatology |
| dplyr | A Grammar of Data Manipulation |
| dplyr.teradata | A 'Teradata' Backend for 'dplyr' |
| dplyrAssist | RStudio Addin for Teaching and Learning Data Manipulation Using 'dplyr' |
| dpmr | Data Package Manager for R |
| DPP | Inference of Parameters of Normal Distributions from a Mixture of Normals |
| dppmix | Determinantal Point Process Mixture Models |
| DPQ | Density, Probability, Quantile ('DPQ') Computations |
| DPQmpfr | DPQ (Density, Probability, Quantile) Distribution Computations using MPFR |
| dprint | Print Tabular Data to Graphics Device |
| dpseg | Piecewise Linear Segmentation by Dynamic Programming |
| DPtree | Dirichlet-Based Polya Tree |
| DPWeibull | Dirichlet Process Weibull Mixture Model for Survival Data |
| dqrng | Fast Pseudo Random Number Generators |
| dr | Methods for Dimension Reduction for Regression |
| dr4pl | Dose Response Data Analysis using the 4 Parameter Logistic (4pl) Model |
| dracor | Decode Draco Format 3D Mesh Data |
| dragon | Deep Time Redox Analysis of the Geobiology Ontology Network |
| dragonking | Statistical Tools to Identify Dragon Kings |
| dragracer | Data Sets for RuPaul's Drag Race |
| dragulaR | Drag and Drop Elements in 'Shiny' using 'Dragula Javascript Library' |
| drake | A Pipeline Toolkit for Reproducible Computation at Scale |
| DramaAnalysis | Analysis of Dramatic Texts |
| drat | 'Drat' R Archive Template |
| draw | Wrapper Functions for Producing Graphics |
| DRaWR | Discriminative Random Walk with Restart |
| drawsample | Draw Samples with the Desired Properties from a Data Set |
| DRAYL | Computation of Rayleigh Densities of Arbitrary Dimension |
| DrBats | Data Representation: Bayesian Approach That's Sparse |
| drc | Analysis of Dose-Response Curves |
| DRDID | Doubly Robust Difference-in-Differences Estimators |
| dreamerr | Error Handling Made Easy |
| DREGAR | Regularized Estimation of Dynamic Linear Regression in the Presence of Autocorrelated Residuals (DREGAR) |
| drf | Distributional Random Forests |
| drfit | Dose-Response Data Evaluation |
| drgee | Doubly Robust Generalized Estimating Equations |
| DRHotNet | Differential Risk Hotspots in a Linear Network |
| drhur | Learning R with Dr. Hu |
| DriftBurstHypothesis | Calculates the Test-Statistic for the Drift Burst Hypothesis |
| drifter | Concept Drift and Concept Shift Detection for Predictive Models |
| DrillR | R Driver for Apache Drill |
| DrImpute | Imputing Dropout Events in Single-Cell RNA-Sequencing Data |
| DrInsight | Drug Repurposing: Integration and Systematic Investigation of Genomic High Throughput Data |
| DRIP | Discontinuous Regression and Image Processing |
| DriveML | Self-Drive Machine Learning Projects |
| driveR | Prioritizing Cancer Driver Genes Using Genomics Data |
| drmdel | Dual Empirical Likelihood Inference under Density Ratio Models in the Presence of Multiple Samples |
| DRomics | Dose Response for Omics |
| dropR | Analyze Drop Out of an Experiment or Survey |
| droptest | Simulates LOX Drop Testing |
| drord | Doubly-Robust Estimators for Ordinal Outcomes |
| drought | Statistical Modeling and Assessment of Drought |
| DRR | Dimensionality Reduction via Regression |
| drtmle | Doubly-Robust Nonparametric Estimation and Inference |
| DrugClust | Implementation of a Machine Learning Framework for Predicting Drugs Side Effects |
| drumr | Turn R into a Drum Machine |
| ds | Descriptive Statistics |
| ds4psy | Data Science for Psychologists |
| dsa | Seasonal Adjustment of Daily Time Series |
| DSAIDE | Dynamical Systems Approach to Infectious Disease Epidemiology (Ecology/Evolution) |
| DSAIRM | Dynamical Systems Approach to Immune Response Modeling |
| dsample | Discretization-Based Direct Random Sample Generation |
| dsb | Normalize & Denoise Droplet Single Cell Protein Data (CITE-seq) |
| DSBayes | Bayesian subgroup analysis in clinical trials |
| dscore | D-Score for Child Development |
| dse | Dynamic Systems Estimation (Time Series Package) |
| DSI | 'DataSHIELD' Interface |
| DSjobtracker | What Skills and Qualifications are Required for Data Science Related Jobs? |
| DSL | Distributed Storage and List |
| dslabs | Data Science Labs |
| dslice | Dynamic Slicing |
| DSLite | 'DataSHIELD' Implementation on Local Datasets |
| dsm | Density Surface Modelling of Distance Sampling Data |
| dsmisc | Data Science Box of Pandora Miscellaneous |
| DSMolgenisArmadillo | 'DataSHIELD' Client for 'MOLGENIS Armadillo' |
| DSOpal | 'DataSHIELD' Implementation for 'Opal' |
| DSpoty | Get 'Spotify' API Multiple Information |
| dsrTest | Tests and Confidence Intervals on Directly Standardized Rates for Several Methods |
| DSSAT | A Comprehensive R Interface for the DSSAT Cropping Systems Model |
| dssd | Distance Sampling Survey Design |
| DSsim | Distance Sampling Simulations |
| dst | Using the Theory of Belief Functions |
| dstack | Publishing Interactive Plots |
| DstarM | Analyze Two Choice Reaction Time Data with the D*M Method |
| dstat | Conditional Sensitivity Analysis for Matched Observational Studies |
| DStree | Recursive Partitioning for Discrete-Time Survival Trees |
| dSVA | Direct Surrogate Variable Analysis |
| DSviaDRM | Exploring Disease Similarity in Terms of Dysfunctional Regulatory Mechanisms |
| DSWE | Data Science for Wind Energy |
| DT | A Wrapper of the JavaScript Library 'DataTables' |
| dtangle | Cell Type Deconvolution from Gene Expressions |
| DTAT | Dose Titration Algorithm Tuning |
| DTAXG | Diagnostic Test Assessment in the Absence of Gold Standard |
| DTComPair | Comparison of Binary Diagnostic Tests in a Paired Study Design |
| DtD | Distance to Default |
| DTDA | Doubly Truncated Data Analysis |
| DTDA.cif | Doubly Truncated Data Analysis, Cumulative Incidence Functions |
| DTDA.ni | Doubly Truncated Data Analysis, Non Iterative |
| dti | Analysis of Diffusion Weighted Imaging (DWI) Data |
| DTK | Dunnett-Tukey-Kramer Pairwise Multiple Comparison Test Adjusted for Unequal Variances and Unequal Sample Sizes |
| DTMCPack | Suite of functions related to discrete-time discrete-state Markov Chains |
| dtp | Dynamic Panel Threshold Model |
| dtpcrm | Dose Transition Pathways for Continual Reassessment Method |
| dtplyr | Data Table Back-End for 'dplyr' |
| DTR | Estimation and Comparison of Dynamic Treatment Regimes |
| dtree | Decision Trees |
| DTRlearn2 | Statistical Learning Methods for Optimizing Dynamic Treatment Regimes |
| DTRreg | DTR Estimation and Inference via G-Estimation, Dynamic WOLS, Q-Learning, and Dynamic Weighted Survival Modeling (DWSurv) |
| dtrSurv | Dynamic Treatment Regimes for Survival Analysis |
| DTSg | A Class for Working with Time Series Based on 'data.table' and 'R6' with Largely Optional Reference Semantics |
| dtt | Discrete Trigonometric Transforms |
| dttr2 | Manipulate Date, POSIXct and hms Vectors |
| dtw | Dynamic Time Warping Algorithms |
| DTWBI | Imputation of Time Series Based on Dynamic Time Warping |
| dtwclust | Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance |
| dtwSat | Time-Weighted Dynamic Time Warping for Satellite Image Time Series Analysis |
| DTWUMI | Imputation of Multivariate Time Series Based on Dynamic Time Warping |
| dual | Automatic Differentiation with Dual Numbers |
| dualtrees | Decimated and Undecimated 2D Complex Dual-Tree Wavelet Transform |
| duawranglr | Securely Wrangle Dataset According to Data Usage Agreement |
| dub | Unpacking Assignment for Lists via Pattern Matching |
| duckdb | DBI Package for the DuckDB Database Management System |
| duckduckr | Simple Client for the DuckDuckGo Instant Answer API |
| dummies | Create dummy/indicator variables flexibly and efficiently |
| dummy | Automatic Creation of Dummies with Support for Predictive Modeling |
| dundermifflin | The Office Quotes on-Demand |
| dunn.test | Dunn's Test of Multiple Comparisons Using Rank Sums |
| DunnettTests | Software implementation of step-down and step-up Dunnett test procedures |
| dupiR | Bayesian inference from count data using discrete uniform priors |
| dupree | Identify Duplicated R Code in a Project |
| durmod | Mixed Proportional Hazard Competing Risk Model |
| DVHmetrics | Analyze Dose-Volume Histograms and Check Constraints |
| dvmisc | Convenience Functions, Moving Window Statistics, and Graphics |
| dvqcc | Dynamic VAR - Based Control Charts for Batch Process Monitoring |
| DWBmodelUN | Dynamic Water Balance a Hydrological Model |
| DWDLargeR | Fast Algorithms for Large Scale Generalized Distance Weighted Discrimination |
| dwdradar | Read Binary Radar Files from 'DWD' (German Weather Service) |
| DWLasso | Degree Weighted Lasso |
| dwlm | Doubly Weighted Linear Model |
| DWreg | Parametric Regression for Discrete Response |
| dyads | Dyadic Network Analysis |
| dycdtools | Tools for DYRESM-CAEDYM Model Development: Calibration Assistant and Post-Processing |
| dydea | Detection of Chaotic and Regular Intervals in the Data |
| dygraphs | Interface to 'Dygraphs' Interactive Time Series Charting Library |
| Dykstra | Quadratic Programming using Cyclic Projections |
| DYM | Did You Mean? |
| dyn | Time Series Regression |
| dynamac | Dynamic Simulation and Testing for Single-Equation ARDL Models |
| DynamicDistribution | Dynamically visualized probability distributions and their moments |
| DynamicGP | Modelling and Analysis of Dynamic Computer Experiments |
| dynamicGraph | dynamicGraph |
| dynamichazard | Dynamic Hazard Models using State Space Models |
| dynamicTreeCut | Methods for Detection of Clusters in Hierarchical Clustering Dendrograms |
| DynaRankR | Inferring Longitudinal Dominance Hierarchies |
| DynareR | A Seamless Integration of 'R' and 'Dynare' |
| dynatopmodel | Implementation of the Dynamic TOPMODEL Hydrological Model |
| dynaTree | Dynamic Trees for Learning and Design |
| dynBiplotGUI | Full Interactive GUI for Dynamic Biplot in R |
| DynClust | Denoising and clustering for dynamical image sequence (2D or 3D)+T |
| DynComm | Dynamic Network Communities Detection and Generation |
| dyncomp | Complexity of Short and Coarse-Grained Time Series |
| dynCorr | Dynamic Correlation Package |
| dyndimred | Dimensionality Reduction Methods in a Common Format |
| dynetNLAResistance | Resisting Neighbor Label Attack in a Dynamic Network |
| dyngen | A Multi-Modal Simulator for Spearheading Single-Cell Omics Analyses |
| dynia | Fit Dynamic Intervention Model |
| dynlm | Dynamic Linear Regression |
| dynmix | Estimation of Dynamic Finite Mixtures |
| DynNom | Visualising Statistical Models using Dynamic Nomograms |
| dynpanel | Dynamic Panel Data Models |
| dynparam | Creating Meta-Information for Parameters |
| dynpred | Companion Package to "Dynamic Prediction in Clinical Survival Analysis" |
| dynprog | Dynamic Programming Domain-Specific Language |
| dynr | Dynamic Modeling in R |
| dynRB | Dynamic Range Boxes |
| dynsbm | Dynamic Stochastic Block Models |
| dynsim | Dynamic Simulations of Autoregressive Relationships |
| dynsurv | Dynamic Models for Survival Data |
| DynTxRegime | Methods for Estimating Optimal Dynamic Treatment Regimes |
| dynutils | Common Functionality for the 'dynverse' Packages |
| dynwrap | Representing and Inferring Single-Cell Trajectories |
| DySeq | Functions for Dyadic Sequence Analyses |
| DysPIA | Dysregulated Pathway Identification Analysis |
| DysPIAData | Background and Pathway Data Used in 'DysPIA' |
| e1071 | Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien |
| E4tools | Management and Processing Tools for Data Produced by the Empatica E4 |
| eadrm | Fitting Dose-Response Models Using an Evolutionary Algorithm |
| eaf | Plots of the Empirical Attainment Function |
| Eagle | Multiple Locus Association Mapping on a Genome-Wide Scale |
| EAinference | Estimator Augmentation and Simulation-Based Inference |
| eAnalytics | Dynamic Web-Based Analytics for the Energy Industry |
| earlygating | Properties of Bayesian Early Gating Designs |
| earlyR | Estimation of Transmissibility in the Early Stages of a Disease Outbreak |
| earlywarnings | Early Warning Signals Toolbox for Detecting Critical Transitions in Timeseries |
| earth | Multivariate Adaptive Regression Splines |
| earthtide | Parallel Implementation of 'ETERNA 3.40' for Prediction and Analysis of Earth Tides |
| earthtones | Derive a Color Palette from a Particular Location on Earth |
| EasyABC | Efficient Approximate Bayesian Computation Sampling Schemes |
| easyAHP | Analytic Hierarchy Process (AHP) |
| easyalluvial | Generate Alluvial Plots with a Single Line of Code |
| easyanova | Analysis of Variance and Other Important Complementary Analyses |
| easyCODA | Compositional Data Analysis in Practice |
| easycsv | Load Multiple 'csv' and 'txt' Tables |
| easyDes | An Easy Way to Descriptive Analysis |
| EasyHTMLReport | EasyHTMLReport |
| EasyMx | Easy Model-Builder Functions for 'OpenMx' |
| easyNCDF | Tools to Easily Read/Write NetCDF Files into/from Multidimensional R Arrays |
| easynls | Easy Nonlinear Model |
| easypackages | Easy Loading and Installing of Packages |
| easypower | Sample Size Estimation for Experimental Designs |
| easyPSID | Reading, Formatting, and Organizing the Panel Study of Income Dynamics (PSID) |
| easyPubMed | Search and Retrieve Scientific Publication Records from PubMed |
| easyr | Helpful Functions from Oliver Wyman Actuarial Consulting |
| easyreg | Easy Regression |
| easySdcTable | Easy Interface to the Statistical Disclosure Control Package 'sdcTable' |
| easySVG | An Easy SVG Basic Elements Generator |
| easyVerification | Ensemble Forecast Verification for Large Data Sets |
| eatATA | Create Constraints for Small Test Assembly Problems |
| eatDB | Spreadsheet Interface for Relational Databases |
| eatGADS | Data Management of Large Hierarchical Data |
| eatRep | Educational Assessment Tools for Replication Methods |
| eatTools | Miscellaneous Functions for the Analysis of Educational Assessments |
| eba | Elimination-by-Aspects Models |
| ebal | Entropy reweighting to create balanced samples |
| EBASS | Sample Size Calculation Method for Cost-Effectiveness Studies Based on Expected Value of Perfect Information |
| EbayesThresh | Empirical Bayes Thresholding and Related Methods |
| ebdbNet | Empirical Bayes Estimation of Dynamic Bayesian Networks |
| EBEN | Empirical Bayesian Elastic Net |
| ebGenotyping | Genotyping and SNP Detection using Next Generation Sequencing Data |
| EBglmnet | Empirical Bayesian Lasso and Elastic Net Methods for Generalized Linear Models |
| ebirdst | Access and Analyze eBird Status and Trends Data |
| EBMAforecast | Estimate Ensemble Bayesian Model Averaging Forecasts using Gibbs Sampling or EM-Algorithms |
| ebmc | Ensemble-Based Methods for Class Imbalance Problem |
| ebmstate | Empirical Bayes Multi-State Cox Model |
| EBPRS | Derive Polygenic Risk Score Based on Emprical Bayes Theory |
| EBrank | Empirical Bayes Ranking |
| ebreg | Implementation of the Empirical Bayes Method |
| eBsc | "Empirical Bayes Smoothing Splines with Correlated Errors" |
| ebSNP | Genotyping and SNP calling using single-sample next generation sequencing data |
| ec50estimator | An Automated Way to Estimate EC50 for Stratified Datasets |
| ecap | Excess Certainty Adjusted Probability Estimate |
| eCAR | Eigenvalue CAR Models |
| ecb | Programmatic Access to the European Central Bank's Statistical Data Warehouse (SDW) |
| ecce | Translate English Words into Chinese, or Translate Chinese Words into English |
| ECctmc | Simulation from Endpoint-Conditioned Continuous Time Markov Chains |
| ecd | Elliptic Lambda Distribution and Option Pricing Model |
| Ecdat | Data Sets for Econometrics |
| ecdfHT | Empirical CDF for Heavy Tailed Data |
| ecespa | Functions for Spatial Point Pattern Analysis |
| Ecfun | Functions for 'Ecdat' |
| ECGofTestDx | A Goodness-of-Fit Test for Elliptical Distributions with Diagnostic Capabilities |
| ech | Toolbox for ECH with R |
| ECharts2Shiny | Embedding Interactive Charts Generated with ECharts Library into Shiny Applications |
| echarts4r | Create Interactive Graphs with 'Echarts JavaScript' Version 4 |
| echarty | Minimal R/Shiny Interface to Library 'Echarts JavaScript' |
| echelon | The Echelon Analysis and the Detection of Spatial Clusters using Echelon Scan Method |
| eChem | Simulations for Electrochemistry Experiments |
| echo.find | Finding Rhythms Using Extended Circadian Harmonic Oscillators (ECHO) |
| echogram | Echogram Visualisation and Analysis |
| echor | Access EPA 'ECHO' Data |
| ecipex | Efficient Calculation of Fine Structure Isotope Patterns via Fourier Transforms of Simplex-Based Elemental Models |
| ECLRMC | Ensemble Correlation-Based Low-Rank Matrix Completion |
| eclust | Environment Based Clustering for Interpretable Predictive Models in High Dimensional Data |
| ecm | Build Error Correction Models |
| ecmwfr | Interface to 'ECMWF' and 'CDS' Data Web Services |
| ecochange | Integrating Ecological Remote Sensing Data to Derive EBV Metrics |
| ecoCopula | Graphical Modelling and Ordination using Copulas |
| EcoDiet | Estimating a Diet Matrix from Biotracer and Stomach Content Data |
| ecodist | Dissimilarity-Based Functions for Ecological Analysis |
| Ecohydmod | Ecohydrological Modelling |
| EcoHydRology | A Community Modeling Foundation for Eco-Hydrology |
| EcoIndR | Ecological Indicators |
| ECoL | Complexity Measures for Supervised Problems |
| ecolMod | "A practical guide to ecological modelling - using R as a simulation platform" |
| ecolottery | Coalescent-Based Simulation of Ecological Communities |
| ecolTest | Community Ecology Tests |
| EconDemand | General Analysis of Various Economics Demand Systems |
| econet | Estimation of Parameter-Dependent Network Centrality Measures |
| EcoNetGen | Simulate and Sample from Ecological Interaction Networks |
| econetwork | Analyzing Ecological Networks |
| economiccomplexity | Computational Methods for Economic Complexity |
| ecoreg | Ecological Regression using Aggregate and Individual Data |
| ecorest | Conducts Analyses Informing Ecosystem Restoration Decisions |
| ecosim | Toolbox for Aquatic Ecosystem Modeling |
| EcoSimR | Null Model Analysis for Ecological Data |
| ECOSolveR | Embedded Conic Solver in R |
| ecospace | Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks |
| ecospat | Spatial Ecology Miscellaneous Methods |
| ecostats | Code and Data Accompanying the Eco-Stats Text |
| EcotoneFinder | Characterising and Locating Ecotones and Communities |
| ecotox | Analysis of Ecotoxicology |
| ecotoxicology | Methods for Ecotoxicology |
| EcoTroph | EcoTroph R package |
| ecoval | Procedures for Ecological Assessment of Surface Waters |
| EcoVirtual | Simulation of Ecological Models |
| ecp | Non-Parametric Multiple Change-Point Analysis of Multivariate Data |
| ecr | Evolutionary Computation in R |
| ectotemp | Quantitative Estimates of Small Ectotherm Temperature Regulation Effectiveness |
| ECTTDNN | Cointegration Based Timedelay Neural Network Model |
| Ecume | Equality of 2 (or k) Continuous Univariate and Multivariate Distributions |
| ed50 | Estimate ED50 and Its Confidence Interval |
| ed50simulation | Estimate ED50 and Its Confidence Interval |
| EDA | Energy Decomposition Analysis |
| eda4treeR | Experimental Design and Analysis for Tree Improvement |
| edbuildmapr | Download School District Geospatial Data, Perform Spatial Analysis, and Create Formatted Exportable Maps |
| edbuildr | Automated School District Data Download and Processing |
| edcc | Economic Design of Control Charts |
| edci | Edge Detection and Clustering in Images |
| eddi | Get Evaporative Demand Drought Index Raster Data |
| eddington | Compute a Cyclist's Eddington Number |
| edeaR | Exploratory and Descriptive Event-Based Data Analysis |
| edeR | Email Data Extraction Using R |
| edf | Read Data from European Data Format (EDF and EDF+) Files |
| EDFIR | Estimating Discrimination Factors |
| edfReader | Reading EDF(+) and BDF(+) Files |
| edfun | Creating Empirical Distribution Functions |
| edgar | Tool for the U.S. SEC EDGAR Retrieval and Parsing of Corporate Filings |
| edgarWebR | SEC Filings Access |
| edgebundleR | Circle Plot with Bundled Edges |
| edgeCorr | Spatial Edge Correction |
| edgedata | Datasets that Support the EDGE Server DIY Logic |
| edgeRun | More Powerful Unconditional Testing of Negative Binomial Means for Digital Gene Expression Data |
| edina | Bayesian Estimation of an Exploratory Deterministic Input, Noisy and Gate Model |
| EDISON | Network Reconstruction and Changepoint Detection |
| editData | 'RStudio' Addin for Editing a 'data.frame' |
| EditImputeCont | Simultaneous Edit-Imputation for Continuous Microdata |
| editrules | Parsing, Applying, and Manipulating Data Cleaning Rules |
| eDMA | Dynamic Model Averaging with Grid Search |
| edmdata | Data Sets for Psychometric Modeling |
| EDMeasure | Energy-Based Dependence Measures |
| EDNE.EQ | Implements the EDNE-Test for Equivalence |
| EDOIF | Empirical Distribution Ordering Inference Framework (EDOIF) |
| edrGraphicalTools | Provides Tools for Dimension Reduction Methods |
| edstan | Stan Models for Item Response Theory |
| EdSurvey | Analysis of NCES Education Survey and Assessment Data |
| educineq | Compute and Decompose Inequality in Education |
| edwards97 | Langmuir Semi-Empirical Coagulation Model |
| eechidna | Exploring Election and Census Highly Informative Data Nationally for Australia |
| eefAnalytics | Robust Analytical Methods for Evaluating Educational Interventions using Randomised Controlled Trials Designs |
| eegkit | Toolkit for Electroencephalography Data |
| eegkitdata | Data for package eegkit |
| eel | Extended Empirical Likelihood |
| EEM | Read and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data |
| EEMDelm | Ensemble Empirical Mode Decomposition and Its Variant Based ELM Model |
| eemdTDNN | EEMD and Its Variant Based Time Delay Neural Network Model |
| eemR | Tools for Pre-Processing Emission-Excitation-Matrix (EEM) Fluorescence Data |
| eeptools | Convenience Functions for Education Data |
| eesim | Simulate and Evaluate Time Series for Environmental Epidemiology |
| ef | Modelling Framework for the Estimation of Salmonid Abundance |
| EFA.dimensions | Exploratory Factor Analysis Functions for Assessing Dimensionality |
| EFA.MRFA | Dimensionality Assessment Using Minimum Rank Factor Analysis |
| EFAtools | Fast and Flexible Implementations of Exploratory Factor Analysis Tools |
| EFAutilities | Utility Functions for Exploratory Factor Analysis |
| EFDR | Wavelet-Based Enhanced FDR for Detecting Signals from Complete or Incomplete Spatially Aggregated Data |
| EffectLiteR | Average and Conditional Effects |
| effectR | Predicts Oomycete Effectors |
| effects | Effect Displays for Linear, Generalized Linear, and Other Models |
| effectsize | Indices of Effect Size and Standardized Parameters |
| effectsizescr | Indices for Single-Case Research |
| EffectsRelBaseline | Test changes of a grouped response relative to baseline |
| EffectStars | Visualization of Categorical Response Models |
| EffectStars2 | Effect Stars |
| EffectTreat | Prediction of Therapeutic Success |
| EfficientMaxEigenpair | Efficient Initials for Computing the Maximal Eigenpair |
| efflog | The Causal Effects for a Causal Loglinear Model |
| effsize | Efficient Effect Size Computation |
| eflm | Efficient Fitting of Linear and Generalized Linear Models |
| efreadr | Read European Eddy Fluxes CSV Files |
| eFRED | Fetch Data from the Federal Reserve Economic Database |
| EFS | Tool for Ensemble Feature Selection |
| efts | High-Level Functions to Read and Write Ensemble Forecast Time Series in netCDF |
| ega | Error Grid Analysis |
| EGAnet | Exploratory Graph Analysis - A Framework for Estimating the Number of Dimensions in Multivariate Data Using Network Psychometrics |
| egcm | Engle-Granger Cointegration Models |
| egg | Extensions for 'ggplot2': Custom Geom, Custom Themes, Plot Alignment, Labelled Panels, Symmetric Scales, and Fixed Panel Size |
| eggCounts | Hierarchical Modelling of Faecal Egg Counts |
| egor | Import and Analyse Ego-Centered Network Data |
| EGRET | Exploration and Graphics for RivEr Trends |
| EGRETci | Exploration and Graphics for RivEr Trends Confidence Intervals |
| eGST | Leveraging eQTLs to Identify Individual-Level Tissue of Interest for a Complex Trait |
| eha | Event History Analysis |
| ehaGoF | Calculates Goodness of Fit Statistics |
| ehelp | Enhanced Help to Enable "Docstring"-Comments in Users Functions |
| eHOF | Extended HOF (Huisman-Olff-Fresco) Models |
| EHR | Electronic Health Record (EHR) Data Processing and Analysis Tool |
| EHRtemporalVariability | Delineating Temporal Dataset Shifts in Electronic Health Records |
| ei | Ecological Inference |
| eia | API Wrapper for 'US Energy Information Administration' Open Data |
| EIAdata | R Wrapper for the Energy Information Administration (EIA) API |
| eicm | Explicit Interaction Community Models |
| eiCompare | Compares Ecological Inference, Goodman, Rows by Columns Estimates |
| eigeninv | Generates (dense) matrices that have a given set of eigenvalues |
| eigenmodel | Semiparametric Factor and Regression Models for Symmetric Relational Data |
| eigenprcomp | Computes confidence intervals for principal components |
| EigenR | Complex Matrix Algebra with 'Eigen' |
| eikosograms | The Picture of Probability |
| EILA | Efficient Inference of Local Ancestry |
| eimpute | Efficiently Impute Large Scale Incomplete Matrix |
| einet | Effective Information and Causal Emergence |
| eiPack | Ecological Inference and Higher-Dimension Data Management |
| eirm | Explanatory Item Response Modeling for Dichotomous and Polytomous Items |
| eive | An Algorithm for Reducing Errors-in-Variable Bias in Simple Linear Regression |
| eivtools | Measurement Error Modeling Tools |
| eixport | Export Emissions to Atmospheric Models |
| EKMCMC | MCMC Procedures for Estimating Enzyme Kinetics Constants |
| EL | Two-sample Empirical Likelihood |
| EL2Surv | Empirical Likelihood (EL) for Comparing Two Survival Functions |
| elaborator | A 'shiny' Application for Exploring Laboratory Data |
| elasso | Enhanced Least Absolute Shrinkage and Selection Operator Regression Model |
| elastic | General Purpose Interface to 'Elasticsearch' |
| elasticIsing | Ising Network Estimation using Elastic Net and k-Fold Cross-Validation |
| elasticnet | Elastic-Net for Sparse Estimation and Sparse PCA |
| elasticsearchr | A Lightweight Interface for Interacting with Elasticsearch from R |
| elec | Collection of Functions for Statistical Election Audits |
| elec.strat | Functions for election audits using stratified random samples |
| EleChemr | Electrochemical Reactions Simulation |
| elect | Estimation of Life Expectancies Using Multi-State Models |
| elections | USA Presidential Elections Data |
| electionsBR | R Functions to Download and Clean Brazilian Electoral Data |
| electivity | Algorithms for Electivity Indices |
| electoral | Allocating Seats Methods and Party System Scores |
| elementR | An Framework for Reducing Elemental LAICPMS Data from Solid Structures |
| elevatr | Access Elevation Data from Various APIs |
| elexr | Load Associated Press Election Results with Elex |
| elfDistr | Kumaraswamy Complementary Weibull Geometric (Kw-CWG) Probability Distribution |
| elhmc | Sampling from a Empirical Likelihood Bayesian Posterior of Parameters Using Hamiltonian Monte Carlo |
| ELISAtools | ELISA Data Analysis with Batch Correction |
| eList | List Comprehension and Tools |
| elitism | Equipment for Logarithmic and Linear Time Stepwise Multiple Hypothesis Testing |
| elliplot | Ellipse Summary Plot of Quantiles |
| ellipse | Functions for Drawing Ellipses and Ellipse-Like Confidence Regions |
| ellipsis | Tools for Working with ... |
| elliptic | Weierstrass and Jacobi Elliptic Functions |
| ellipticalsymmetry | Elliptical Symmetry Tests |
| elmNNRcpp | The Extreme Learning Machine Algorithm |
| ELMR | Extreme Machine Learning (ELM) |
| ELMSO | Implementation of the Efficient Large-Scale Online Display Advertising Algorithm |
| elo | Elo Ratings |
| EloChoice | Preference Rating for Visual Stimuli Based on Elo Ratings |
| EloOptimized | Optimized Elo Rating Method for Obtaining Dominance Ranks |
| EloRating | Animal Dominance Hierarchies by Elo Rating |
| elsa | Entropy-Based Local Indicator of Spatial Association |
| ElstonStewart | Elston-Stewart Algorithm |
| ELT | Experience Life Tables |
| eltr | Utilise Catastrophe Model Event Loss Table Outputs |
| ELYP | Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model |
| EM.Fuzzy | EM Algorithm for Maximum Likelihood Estimation by Non-Precise Information |
| EMA | Easy Microarray Data Analysis |
| EMAtools | Data Management Tools for Real-Time Monitoring/Ecological Momentary Assessment Data |
| emayili | Send Email Messages |
| emba | Ensemble Boolean Model Biomarker Analysis |
| EMbC | Expectation-Maximization Binary Clustering |
| embed | Extra Recipes for Encoding Categorical Predictors |
| EmbedSOM | Fast Embedding Guided by Self-Organizing Map |
| embryogrowth | Tools to Analyze the Thermal Reaction Norm of Embryo Growth |
| EMC | Evolutionary Monte Carlo (EMC) algorithm |
| EMCluster | EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution |
| EMD | Empirical Mode Decomposition and Hilbert Spectral Analysis |
| EMDANNhybrid | Ensemble Machine Learning Hybrid Model |
| emdbook | Support Functions and Data for "Ecological Models and Data" |
| emdi | Estimating and Mapping Disaggregated Indicators |
| emdist | Earth Mover's Distance |
| EMDSVRhybrid | Hybrid Machine Learning Model |
| emg | Exponentially Modified Gaussian (EMG) Distribution |
| emhawkes | Exponential Multivariate Hawkes Model |
| emIRT | EM Algorithms for Estimating Item Response Theory Models |
| EmissV | Vehicular Emissions by Top-Down Methods |
| EmiStatR | Emissions and Statistics in R for Wastewater and Pollutants in Combined Sewer Systems |
| EML | Read and Write Ecological Metadata Language Files |
| emld | Ecological Metadata as Linked Data |
| eMLEloglin | Fitting log-Linear Models in Sparse Contingency Tables |
| emma | Evolutionary model-based multiresponse approach |
| EMMAgeo | End-Member Modelling of Grain-Size Data |
| emme2 | Read and Write to an EMME/2 databank |
| emmeans | Estimated Marginal Means, aka Least-Squares Means |
| EMMIXgene | A Mixture Model-Based Approach to the Clustering of Microarray Expression Data |
| EMMIXmfa | Mixture Models with Component-Wise Factor Analyzers |
| EMMLi | A Maximum Likelihood Approach to the Analysis of Modularity |
| EMMREML | Fitting Mixed Models with Known Covariance Structures |
| emoa | Evolutionary Multiobjective Optimization Algorithms |
| emojifont | Emoji and Font Awesome in Graphics |
| emon | Tools for Environmental and Ecological Survey Design |
| emov | Eye Movement Analysis Package for Fixation and Saccade Detection |
| EMP | Expected Maximum Profit Classification Performance Measure |
| empichar | Evaluates the Empirical Characteristic Function for Multivariate Samples |
| EmpiricalCalibration | Routines for Performing Empirical Calibration of Observational Study Estimates |
| empiricalFDR.DESeq2 | Simulation-Based False Discovery Rate in RNA-Seq |
| emplik | Empirical Likelihood Ratio for Censored/Truncated Data |
| emplik2 | Empirical Likelihood Ratio Test for Two Samples with Censored Data |
| ems | Epimed Solutions Collection for Data Editing, Analysis, and Benchmark of Health Units |
| EMSaov | The Analysis of Variance with EMS |
| EMSC | Extended Multiplicative Signal Correction |
| EMSNM | EM Algorithm for Sigmoid Normal Model |
| EMSS | Some EM-Type Estimation Methods for the Heckman Selection Model |
| emstreeR | Tools for Fast Computing and Plotting Euclidean Minimum Spanning Trees |
| EMT | Exact Multinomial Test: Goodness-of-Fit Test for Discrete Multivariate data |
| emulator | Bayesian Emulation of Computer Programs |
| emuR | Main Package of the EMU Speech Database Management System |
| EMVS | The Expectation-Maximization Approach to Bayesian Variable Selection |
| enc | Portable Tools for 'UTF-8' Character Data |
| EncDNA | Encoding of Nucleotide Sequences into Numeric Feature Vectors |
| eNchange | Ensemble Methods for Multiple Change-Point Detection |
| encode | Represent Ordered Lists and Pairs as Strings |
| encryptedRmd | Encrypt Html Reports Using 'Libsodium' |
| encryptr | Easily Encrypt and Decrypt Data Frame/Tibble Columns or Files using RSA Public/Private Keys |
| endogenous | Classical Simultaneous Equation Models |
| endogMNP | R Package for Fitting Multinomial Probit Models with Endogenous Selection |
| endorse | Bayesian Measurement Models for Analyzing Endorsement Experiments |
| endoSwitch | Endogenous Switching Regression Models |
| endtoend | Transmissions and Receptions in an End to End Network |
| energy | E-Statistics: Multivariate Inference via the Energy of Data |
| EnergyOnlineCPM | Distribution Free Multivariate Control Chart Based on Energy Test |
| energyr | Data Published by the United States Federal Energy Regulatory Commission |
| enerscape | Compute Energy Landscapes |
| enetLTS | Robust and Sparse Methods for High Dimensional Linear and Logistic Regression |
| english | Translate Integers into English |
| EngrExpt | Data sets from "Introductory Statistics for Engineering Experimentation" |
| engsoccerdata | English and European Soccer Results 1871-2016 |
| ENMeval | Automated Runs and Evaluations of Ecological Niche Models |
| ENMTools | Analysis of Niche Evolution using Niche and Distribution Models |
| ennet | Utilities to Extract and Analyse Text Data from the Emergency Nutrition Network Forum |
| enpls | Ensemble Partial Least Squares Regression |
| enRich | Analysis of Multiple ChIP-Seq Data |
| enrichR | Provides an R Interface to 'Enrichr' |
| enrichwith | Methods to Enrich R Objects with Extra Components |
| EnsCat | Clustering of Categorical Data |
| EnsembleBase | Extensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling |
| ensembleBMA | Probabilistic Forecasting using Ensembles and Bayesian Model Averaging |
| EnsembleCV | Extensible Package for Cross-Validation-Based Integration of Base Learners |
| ensembleMOS | Ensemble Model Output Statistics |
| EnsemblePCReg | Extensible Package for Principal-Component-Regression-Based Heterogeneous Ensemble Meta-Learning |
| EnsemblePenReg | Extensible Classes and Methods for Penalized-Regression-Based Integration of Base Learners |
| ensemblepp | Ensemble Postprocessing Data Sets |
| ensembleR | Ensemble Models in R |
| ensembleTax | Ensemble Taxonomic Assignments of Amplicon Sequencing Data |
| ensr | Elastic Net SearcheR |
| ensurer | Ensure Values at Runtime |
| entcn | Translate English Words into Chinese Words |
| entropart | Entropy Partitioning to Measure Diversity |
| entropy | Estimation of Entropy, Mutual Information and Related Quantities |
| EntropyEstimation | Estimation of Entropy and Related Quantities |
| EntropyExplorer | Tools for Exploring Differential Shannon Entropy, Differential Coefficient of Variation and Differential Expression |
| EntropyMCMC | MCMC Simulation and Convergence Evaluation using Entropy and Kullback-Leibler Divergence Estimation |
| entrymodels | Estimate Entry Models |
| envalysis | Miscellaneous Functions for Environmental Analyses |
| EnvCpt | Detection of Structural Changes in Climate and Environment Time Series |
| envDocument | Document the R Working Environment |
| enveomics.R | Various Utilities for Microbial Genomics and Metagenomics |
| EnvExpInd | Environmental Exposure on the Individual Level |
| envi | Environmental Interpolation using Spatial Kernel Density Estimation |
| enviGCMS | GC/LC-MS Data Analysis for Environmental Science |
| enviPat | Isotope Pattern, Profile and Centroid Calculation for Mass Spectrometry |
| enviPick | Peak Picking for High Resolution Mass Spectrometry Data |
| envir | Manage R Environments Better |
| envirem | Generation of ENVIREM Variables |
| EnviroPRA | Environmental Probabilistic Risk Assessment Tools |
| EnviroStat | Statistical Analysis of Environmental Space-Time Processes |
| envlpaster | Enveloping the Aster Model |
| envnames | Keep Track of User-Defined Environment Names |
| EnvNicheR | Niche Estimation |
| envoutliers | Methods for Identification of Outliers in Environmental Data |
| EnvStats | Package for Environmental Statistics, Including US EPA Guidance |
| eoffice | Export or Graph and Tables to 'Microsoft' Office and Import Figures and Tables |
| eoR | Data Management Package (Exposure and Occurrence Data in R) |
| epade | Easy Plots |
| epandist | Statistical Functions for the Censored and Uncensored Epanechnikov Distribution |
| epanetReader | Read Epanet Files into R |
| epca | Exploratory Principal Component Analysis |
| ePCR | Ensemble Penalized Cox Regression for Survival Prediction |
| EPGMr | Implementation of the Everglades Phosphorus Gradient Model |
| eph | Argentina's Permanent Household Survey Data and Manipulation Utilities |
| Epi | Statistical Analysis in Epidemiology |
| epibasix | Elementary Epidemiological Functions for Epidemiology and Biostatistics |
| epicontacts | Handling, Visualisation and Analysis of Epidemiological Contacts |
| EpiContactTrace | Epidemiological Tool for Contact Tracing |
| EpiCurve | Plot an Epidemic Curve |
| epidata | Tools to Retrieve Economic Policy Institute Data Library Extracts |
| epiDisplay | Epidemiological Data Display Package |
| EpiDynamics | Dynamic Models in Epidemiology |
| EpiEstim | Estimate Time Varying Reproduction Numbers from Epidemic Curves |
| epifitter | Analysis and Simulation of Plant Disease Progress Curves |
| epiflows | Predicting Disease Spread from Flow Data |
| epigraphdb | Interface Package for the 'EpiGraphDB' Platform |
| epiGWAS | Robust Methods for Epistasis Detection |
| EpiILM | Spatial and Network Based Individual Level Models for Epidemics |
| EpiILMCT | Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics |
| epikit | Miscellaneous Tools for the 'R4Epis' Project |
| epimdr | Functions and Data for "Epidemics: Models and Data in R" |
| EpiModel | Mathematical Modeling of Infectious Disease Dynamics |
| epinet | Epidemic/Network-Related Tools |
| epinetr | Epistatic Network Modelling with Forward-Time Simulation |
| EpiNow2 | Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters |
| epiphy | Analysis of Plant Disease Epidemics |
| epiR | Tools for the Analysis of Epidemiological Data |
| EpiReport | Epidemiological Report |
| episcan | Scan Pairwise Epistasis |
| episensr | Basic Sensitivity Analysis of Epidemiological Results |
| EpiSignalDetection | Signal Detection Analysis |
| episplineDensity | Density Estimation with Soft Information by Exponential Epi-splines |
| epistasis | Detecting Epistatic Selection with Partially Observed Genotype Data |
| EpiStats | Tools for Epidemiologists |
| EpistemicGameTheory | Constructing an Epistemic Model for the Games with Two Players |
| epitab | Flexible Contingency Tables for Epidemiology |
| epitools | Epidemiology Tools |
| epitrix | Small Helpers and Tricks for Epidemics Analysis |
| epitweetr | Early Detection of Public Health Threats from Twitter Data |
| Eplot | Plotting longitudinal series |
| eplusr | A Toolkit for Using Whole Building Simulation Program 'EnergyPlus' |
| eply | Apply a Function Over Expressions |
| epoc | Endogenous Perturbation Analysis of Cancer |
| eponge | Keep Your Environment Clean |
| epos | Epilepsy Ontologies' Similarities |
| epr | Easy Polynomial Regression |
| epsiwal | Exact Post Selection Inference with Applications to the Lasso |
| EPT | Ensemble Patch Transform, Visualization and Decomposition |
| epubr | Read EPUB File Metadata and Text |
| epwshiftr | Create Future 'EnergyPlus' Weather Files using 'CMIP6' Data |
| EPX | Ensemble of Phalanxes |
| epxToR | Import 'Epidata' XML Files '.epx' |
| eq5d | Methods for Analysing 'EQ-5D' Data and Calculating 'EQ-5D' Index Scores |
| EQL | Extended-Quasi-Likelihood-Function (EQL) |
| eqs2lavaan | EQS Output Conversion to lavaan Functions |
| eqtl | Tools for analyzing eQTL experiments: A complementary to Karl Broman's 'qtl' package for genome-wide analysis |
| equalCovs | Testing the Equality of Two Covariance Matrices |
| Equalden.HD | Testing the Equality of a High Dimensional Set of Densities |
| equaltestMI | Examine Measurement Invariance via Equivalence Testing and Projection Method |
| equate | Observed-Score Linking and Equating |
| equateIRT | IRT Equating Methods |
| equateMultiple | Equating of Multiple Forms |
| equatiomatic | Transform Models into 'LaTeX' Equations |
| EquiSurv | Modeling, Confidence Intervals and Equivalence of Survival Curves |
| equivalence | Provides Tests and Graphics for Assessing Tests of Equivalence |
| equivalenceTest | Equivalence Test for the Means of Two Normal Distributions |
| EQUIVNONINF | Testing for Equivalence and Noninferiority |
| equivUMP | Uniformly Most Powerful Invariant Tests of Equivalence |
| ER | Effect + Residual Modelling |
| era | Years with an Era |
| erah | Automated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics |
| erboost | Nonparametric Multiple Expectile Regression via ER-Boost |
| ercv | Fitting Tails by the Empirical Residual Coefficient of Variation |
| erer | Empirical Research in Economics with R |
| ergm | Fit, Simulate and Diagnose Exponential-Family Models for Networks |
| ergm.count | Fit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges |
| ergm.ego | Fit, Simulate and Diagnose Exponential-Family Random Graph Models to Egocentrically Sampled Network Data |
| ergm.rank | Fit, Simulate and Diagnose Exponential-Family Models for Rank-Order Relational Data |
| ergm.userterms | User-specified Terms for the statnet Suite of Packages |
| ergMargins | Process Analysis for Exponential Random Graph Models |
| ergmclust | ERGM-Based Network Clustering |
| ergmharris | Local Health Department network data set |
| ergmito | Exponential Random Graph Models for Small Networks |
| eRm | Extended Rasch Modeling |
| ERP | Significance Analysis of Event-Related Potentials Data |
| erp.easy | Event-Related Potential (ERP) Data Exploration Made Easy |
| erpR | Event-related potentials (ERP) analysis, graphics and utility functions |
| err | Customizable Object Sensitive Messages |
| erratum | Handle Error and Warning Messages |
| errint | Builds Error Intervals |
| errorist | Automatically Search Errors or Warnings |
| errorizer | Function Errorizer |
| errorlocate | Locate Errors with Validation Rules |
| errors | Uncertainty Propagation for R Vectors |
| errum | Exploratory Reduced Reparameterized Unified Model Estimation |
| ERSA | Exploratory Regression 'Shiny' App |
| eRTG3D | Empirically Informed Random Trajectory Generation in 3-D |
| ES | Edge Selection |
| es.dif | Compute Effect Sizes of the Difference |
| esaBcv | Estimate Number of Latent Factors and Factor Matrix for Factor Analysis |
| esaddle | Extended Empirical Saddlepoint Density Approximations |
| esaps | Indicators of Electoral Systems and Party Systems |
| esback | Expected Shortfall Backtesting |
| esc | Effect Size Computation for Meta Analysis |
| escalation | Modular Approach to Dose Finding Clinical Trials |
| esDesign | Adaptive Enrichment Designs with Sample Size Re-Estimation |
| eSDM | Ensemble Tool for Predictions from Species Distribution Models |
| ESEA | ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis |
| eseis | Environmental Seismology Toolbox |
| ESG | A Package for Asset Projection |
| eshrink | Shrinkage for Effect Estimation |
| esmisc | Misc Functions of Eduard Szöcs |
| esmprep | Data Preparation During and After the Use of the Experience Sampling Methodology (ESM) |
| esquisse | Explore and Visualize Your Data Interactively |
| esreg | Joint Quantile and Expected Shortfall Regression |
| ess | Efficient Stepwise Selection in Decomposable Models |
| essentials | Essential Functions not Included in Base R |
| essHist | The Essential Histogram |
| essurvey | Download Data from the European Social Survey on the Fly |
| estatapi | R Interface to e-Stat API |
| EstCRM | Calibrating Parameters for the Samejima's Continuous IRT Model |
| ESTER | Efficient Sequential Testing with Evidence Ratios |
| EstHer | Estimation of Heritability in High Dimensional Sparse Linear Mixed Models using Variable Selection |
| estimability | Tools for Assessing Estimability of Linear Predictions |
| EstimateGroupNetwork | Perform the Joint Graphical Lasso and Selects Tuning Parameters |
| EstimationTools | Maximum Likelihood Estimation for Probability Functions from Data Sets |
| estimatr | Fast Estimators for Design-Based Inference |
| EstimDiagnostics | Diagnostic Tools and Unit Tests for Statistical Estimators |
| estimraw | Estimation of Four-Fold Table Cell Frequencies (Raw Data) from Effect Size Measures |
| estmeansd | Estimating the Sample Mean and Standard Deviation from Commonly Reported Quantiles in Meta-Analysis |
| EstMix | Tumor Clones Percentage Estimations |
| estout | Estimates Output |
| estprod | Estimation of Production Functions |
| EstSimPDMP | Estimation and Simulation for PDMPs |
| estudy2 | An Implementation of Parametric and Nonparametric Event Study |
| esvis | Visualization and Estimation of Effect Sizes |
| etable | Easy Table |
| ETAS | Modeling Earthquake Data Using 'ETAS' Model |
| etasFLP | Mixed FLP and ML Estimation of ETAS Space-Time Point Processes for Earthquake Description |
| ETC | Equivalence to control |
| ether | Interaction with the 'Ethereum' Blockchain |
| ethnobotanyR | Calculate Quantitative Ethnobotany Indices |
| EthSEQ | Ethnicity Annotation from Whole Exome Sequencing Data |
| etl | Extract-Transform-Load Framework for Medium Data |
| ETLUtils | Utility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data |
| etm | Empirical Transition Matrix |
| etma | Epistasis Test in Meta-Analysis |
| etrader | 'ETRADE' API Interface for R |
| etrunct | Computes Moments of Univariate Truncated t Distribution |
| eudract | Creates Safety Results Summary in XML to Upload to EudraCT |
| eulerian | eulerian: A package to find eulerian paths from graphs |
| eulerr | Area-Proportional Euler and Venn Diagrams with Ellipses |
| Eunomia | A Standard Dataset in the OMOP Common Data Model |
| eurlex | Retrieve Data on European Union Law |
| europepmc | R Interface to the Europe PubMed Central RESTful Web Service |
| europop | Historical Populations of European Cities, 1500-1800 |
| EurosarcBayes | Bayesian Single Arm Sample Size Calculation Software |
| eurostat | Tools for Eurostat Open Data |
| eva | Extreme Value Analysis with Goodness-of-Fit Testing |
| evabic | Evaluation of Binary Classifiers |
| EvalEst | Dynamic Systems Estimation - Extensions |
| evalITR | Evaluating Individualized Treatment Rules |
| evaluate | Parsing and Evaluation Tools that Provide More Details than the Default |
| EvaluateCore | Quality Evaluation of Core Collections |
| EvaluationMeasures | Collection of Model Evaluation Measure Functions |
| evaluator | Quantified Risk Assessment Toolkit |
| EValue | Sensitivity Analyses for Unmeasured Confounding and Other Biases in Observational Studies and Meta-Analyses |
| Evapotranspiration | Modelling Actual, Potential and Reference Crop Evapotranspiration |
| evclass | Evidential Distance-Based Classification |
| evclust | Evidential Clustering |
| EvCombR | Evidence Combination in R |
| evd | Functions for Extreme Value Distributions |
| evdbayes | Bayesian Analysis in Extreme Value Theory |
| event | Event History Procedures and Models |
| eventdataR | Event Data Repository |
| EventDetectGUI | Graphical User Interface for the 'EventDetectR' Package |
| EventDetectR | Event Detection Framework |
| eventglm | Regression Models for Event History Outcomes |
| eventInterval | Sequential Event Interval Analysis |
| eventr | Create Event Based Data Architectures |
| events | Store and manipulate event data |
| eventstream | Streaming Events and their Early Classification |
| eventstudies | Event Study Analysis |
| EventStudy | Event Study Analysis |
| evgam | Generalised Additive Extreme Value Models |
| evian | Evidential Analysis of Genetic Association Data |
| evidence | Analysis of Scientific Evidence Using Bayesian and Likelihood Methods |
| evidenceFactors | Reporting Tools for Sensitivity Analysis of Evidence Factors in Observational Studies |
| EvidenceSynthesis | Synthesizing Causal Evidence in a Distributed Research Network |
| evident | Evidence Factors in Observational Studies |
| EviewsR | 'Eviews' Knit-Engine |
| evir | Extreme Values in R |
| evmix | Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation |
| evobiR | Comparative and Population Genetic Analyses |
| evolqg | Tools for Evolutionary Quantitative Genetics |
| EvolutionaryGames | Important Concepts of Evolutionary Game Theory |
| evolvability | Calculation of Evolvability Parameters |
| Evomorph | Evolutionary Morphometric Simulation |
| evoper | Evolutionary Parameter Estimation for 'Repast Simphony' Models |
| EvoRAG | Evolutionary Rates Across Gradients |
| evt0 | Mean of order p, peaks over random threshold Hill and high quantile estimates |
| evtclass | Extreme Value Theory for Open Set Classification - GPD and GEV Classifiers |
| evtree | Evolutionary Learning of Globally Optimal Trees |
| EW | Edgeworth Expansion |
| EWGoF | Goodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions |
| ewoc | Escalation with Overdose Control |
| EWOC2 | Escalation with Overdose Control using 2 Drug Combinations |
| EwR | Econometrics with R |
| EWS | Early Warning System |
| Exact | Unconditional Exact Test |
| exact2x2 | Exact Tests and Confidence Intervals for 2x2 Tables |
| exactci | Exact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases |
| ExactCIdiff | Inductive Confidence Intervals for the difference between two proportions |
| exactextractr | Fast Extraction from Raster Datasets using Polygons |
| exactLoglinTest | Monte Carlo Exact Tests for Log-linear models |
| exactmeta | Exact fixed effect meta analysis |
| ExactMultinom | Multinomial Goodness-of-Fit Tests |
| exactRankTests | Exact Distributions for Rank and Permutation Tests |
| ExamPAData | Data Sets for Predictive Analytics Exam |
| exampletestr | Help for Writing Unit Tests Based on Function Examples |
| exams | Automatic Generation of Exams in R |
| exams.mylearn | Question Generation in the 'MyLearn' XML Format |
| ExceedanceTools | Confidence regions for exceedance sets and contour lines |
| exceedProb | Confidence Intervals for Exceedance Probability |
| excel.link | Convenient Data Exchange with Microsoft Excel |
| ExcelFunctionsR | Imports Excel Functions to R |
| excelR | A Wrapper of the 'JavaScript' Library 'jExcel' |
| excelstrippr | Extracts Tabular Data from Excel Reports |
| excerptr | Excerpt Structuring Comments from Your Code File and Set a Table of Contents |
| ExcessMass | Excess Mass Calculation and Plots |
| exCon | Interactive Exploration of Contour Data |
| excursions | Excursion Sets and Contour Credibility Regions for Random Fields |
| exdex | Estimation of the Extremal Index |
| ExhaustiveSearch | A Fast and Scalable Exhaustive Feature Selection Framework |
| exif | Read EXIF Metadata from JPEGs |
| exifr | EXIF Image Data in R |
| exiftoolr | ExifTool Functionality from R |
| ExomeDepth | Calls Copy Number Variants from Targeted Sequence Data |
| exp2flux | Convert Gene EXPression Data to FBA FLUXes |
| ExPanDaR | Explore Your Data Interactively |
| expandFunctions | Feature Matrix Builder |
| expands | Expanding Ploidy and Allele-Frequency on Nested Subpopulations |
| ExpDE | Modular Differential Evolution for Experimenting with Operators |
| ExpDes | Experimental Designs Package |
| ExpDes.pt | Pacote Experimental Designs (Portugues) |
| experDesign | Design Experiments for Batches |
| experiment | R Package for Designing and Analyzing Randomized Experiments |
| expert | Modeling without data using expert opinion |
| ExpertChoice | Design of Discrete Choice and Conjoint Analysis |
| expint | Exponential Integral and Incomplete Gamma Function |
| ExplainPrediction | Explanation of Predictions for Classification and Regression Models |
| explor | Interactive Interfaces for Results Exploration |
| explore | Simplifies Exploratory Data Analysis |
| exploreR | Tools for Quickly Exploring Data |
| expm | Matrix Exponential, Log, 'etc' |
| expose | Multiple Effect Estimation of Chemicals in Environmental Epidemiology |
| ExPosition | Exploratory Analysis with the Singular Value Decomposition |
| expp | Spatial Analysis of Extra-Pair Paternity |
| expperm | Computing Expectations and Marginal Likelihoods for Permutations |
| ExpRep | Experiment Repetitions |
| expSBM | An Exponential Stochastic Block Model for Interaction Lengths |
| expsmooth | Data Sets from "Forecasting with Exponential Smoothing" |
| expss | Tables, Labels and Some Useful Functions from Spreadsheets and 'SPSS' Statistics |
| exptest | Tests for Exponentiality |
| exreport | Fast, Reliable and Elegant Reproducible Research |
| EXRQ | Extreme Regression of Quantiles |
| exsic | Convenience Functions for Botanists to Create Specimens Indices |
| ExtDist | Extending the Range of Functions for Probability Distributions |
| extdplyr | Data Manipulation Extensions of 'Dplyr' and 'Tidyr' |
| extendedFamily | Additional Families for Generalized Linear Models |
| exteriorMatch | Constructs the Exterior Match from Two Matched Control Groups |
| extfunnel | Additional Funnel Plot Augmentations |
| extlasso | Maximum penalized likelihood estimation with extended lasso penalty |
| ExtMallows | An Extended Mallows Model and Its Hierarchical Version for Ranked Data Aggregation |
| extraBinomial | Extra-binomial approach for pooled sequencing data |
| ExtractTrainData | Extract Values from Raster |
| extraDistr | Additional Univariate and Multivariate Distributions |
| extrafont | Tools for using fonts |
| extrafontdb | Package for holding the database for the extrafont package |
| extraoperators | Extra Binary Relational and Logical Operators |
| extras | Helper Functions for Bayesian Analyses |
| extraterrestrial | Astrobiology Equations Estimating Extraterrestrial Life |
| extraTrees | Extremely Randomized Trees (ExtraTrees) Method for Classification and Regression |
| extRatum | Summary Statistics for Geospatial Features |
| extRC | Extended RC Models for Contingency Tables |
| ExtremalDep | Extremal Dependence Models |
| ExtremeBounds | Extreme Bounds Analysis (EBA) |
| extremefit | Estimation of Extreme Conditional Quantiles and Probabilities |
| extremeIndex | Forecast Verification for Extreme Events |
| ExtremeRisks | Extreme Risk Measures |
| extRemes | Extreme Value Analysis |
| extremeStat | Extreme Value Statistics and Quantile Estimation |
| extremevalues | Univariate Outlier Detection |
| extremis | Statistics of Extremes |
| extremogram | Estimation of Extreme Value Dependence for Time Series Data |
| extWeibQuant | Estimate Lower Extreme Quantile with the Censored Weibull MLE and Censored Weibull Mixture |
| exuber | Econometric Analysis of Explosive Time Series |
| eye | Analysis of Eye Data |
| eyedata | Open Source Ophthalmic Data Sets Curated for R |
| eyelinker | Import ASC Files from EyeLink Eye Trackers |
| eyeRead | Prepare/Analyse Eye Tracking Data for Reading |
| eyetracking | Eyetracking Helper Functions |
| eyeTrackR | Organising and Analysing Eye-Tracking Data |
| ez | Easy Analysis and Visualization of Factorial Experiments |
| ezcox | Easily Process a Batch of Cox Models |
| ezCutoffs | Fit Measure Cutoffs in SEM |
| ezec | Easy Interface to Effective Concentration Calculations |
| ezEDA | Task Oriented Interface for Exploratory Data Analysis |
| ezglm | selects significant non-additive interaction between two variables using fast GLM implementation |
| ezknitr | Avoid the Typical Working Directory Pain When Using 'knitr' |
| ezmmek | Easy Michaelis-Menten Enzyme Kinetics |
| ezpickr | Easy Data Import Using GUI File Picker |
| ezplot | Functions for Common Chart Types |
| ezr | Easy Use of R via Shiny App for Basic Analyses of Experimental Data |
| ezsim | provide an easy to use framework to conduct simulation |
| EZtune | Tunes AdaBoost, Elastic Net, Support Vector Machines, and Gradient Boosting Machines |
| fabCI | FAB Confidence Intervals |
| FABInference | FAB p-Values and Confidence Intervals |
| fabisearch | Change Point Detection in High-Dimensional Time Series Networks |
| fable | Forecasting Models for Tidy Time Series |
| fable.prophet | Prophet Modelling Interface for 'fable' |
| fabletools | Core Tools for Packages in the 'fable' Framework |
| fabMix | Overfitting Bayesian Mixtures of Factor Analyzers with Parsimonious Covariance and Unknown Number of Components |
| fabricatr | Imagine Your Data Before You Collect It |
| fabricerin | Create Easily Canvas in 'shiny' and 'RMarkdown' Documents |
| face | Fast Covariance Estimation for Sparse Functional Data |
| facerec | An Interface for Face Recognition |
| facilitation | A C++ Framework for Plant-Plant Interaction IBMs |
| FacPad | Bayesian Sparse Factor Analysis model for the inference of pathways responsive to drug treatment |
| FactMixtAnalysis | Factor Mixture Analysis with covariates |
| FACTMLE | Maximum Likelihood Factor Analysis |
| FactoClass | Combination of Factorial Methods and Cluster Analysis |
| factoextra | Extract and Visualize the Results of Multivariate Data Analyses |
| FactoInvestigate | Automatic Description of Factorial Analysis |
| FactoMineR | Multivariate Exploratory Data Analysis and Data Mining |
| factoptd | Factorial Optimal Designs for Two-Colour cDNA Microarray Experiments |
| factor.switching | Post-Processing MCMC Outputs of Bayesian Factor Analytic Models |
| FactorAssumptions | Set of Assumptions for Factor and Principal Component Analysis |
| FactorCopula | Factor Copula Models for Mixed Continuous and Discrete Data |
| factorcpt | Simultaneous Change-Point and Factor Analysis |
| factorEx | Design and Analysis for Factorial Experiments |
| factorial2x2 | Design and Analysis of a 2x2 Factorial Trial |
| factorMerger | The Merging Path Plot |
| factorplot | Graphical Presentation of Simple Contrasts |
| factorQR | Bayesian quantile regression factor models |
| FactorsR | Identification of the Factors Affecting Species Richness |
| factorstochvol | Bayesian Estimation of (Sparse) Latent Factor Stochastic Volatility Models |
| factory | Build Function Factories |
| Factoshiny | Perform Factorial Analysis from 'FactoMineR' with a Shiny Application |
| factset.analyticsapi.engines | 'FactSet' Engines API Client |
| factset.protobuf.stach | 'FactSet' 'STACH' Library |
| factualR | thin wrapper for the Factual.com server API |
| fad | Factor Analysis for Data |
| FADA | Variable Selection for Supervised Classification in High Dimension |
| FAdist | Distributions that are Sometimes Used in Hydrology |
| Fahrmeir | Data from the Book "Multivariate Statistical Modelling Based on Generalized Linear Models", First Edition, by Ludwig Fahrmeir and Gerhard Tutz |
| fail | File Abstraction Interface Layer (FAIL) |
| fairadapt | Fair Data Adaptation with Quantile Preservation |
| fairml | Fair Models in Machine Learning |
| fairmodels | Flexible Tool for Bias Detection, Visualization, and Mitigation |
| fairness | Algorithmic Fairness Metrics |
| fairsubset | Choose Representative Subsets |
| faisalconjoint | Faisal Conjoint Model: A New Approach to Conjoint Analysis |
| fakemake | Mock the Unix Make Utility |
| fakeR | Simulates Data from a Data Frame of Different Variable Types |
| falcon | Finding Allele-Specific Copy Number in Next-Generation Sequencing Data |
| falconx | Finding Allele-Specific Copy Number in Whole-Exome Sequencing Data |
| fam.recrisk | Familial Recurrence Risk |
| fam2r | From 'Familias' to R |
| fame | Interface for FAME Time Series Database |
| FamEvent | Family Age-at-Onset Data Simulation and Penetrance Estimation |
| Familias | Probabilities for Pedigrees Given DNA Data |
| FAMILY | A Convex Formulation for Modeling Interactions with Strong Heredity |
| FamilyRank | Algorithm for Ranking Predictors Using Graphical Domain Knowledge |
| FAmle | Maximum Likelihood and Bayesian Estimation of Univariate Probability Distributions |
| FAMoS | A Flexible Algorithm for Model Selection |
| famSKATRC | Family Sequence Kernel Association Test for Rare and Common Variants |
| FAMT | Factor Analysis for Multiple Testing (FAMT) : simultaneous tests under dependence in high-dimensional data |
| fanc | Penalized Likelihood Factor Analysis via Nonconvex Penalty |
| fANCOVA | Nonparametric Analysis of Covariance |
| fancycut | A Fancy Version of 'base::cut' |
| fanovaGraph | Building Kriging Models from FANOVA Graphs |
| fanplot | Visualisation of Sequential Probability Distributions Using Fan Charts |
| fansi | ANSI Control Sequence Aware String Functions |
| FAOSTAT | Download Data from the FAOSTAT Database |
| faoutlier | Influential Case Detection Methods for Factor Analysis and Structural Equation Models |
| faq | Create FAQ Page |
| far | Modelization for Functional AutoRegressive Processes |
| faraway | Functions and Datasets for Books by Julian Faraway |
| FARDEEP | Fast and Robust Deconvolution of Tumor Infiltrating Lymphocyte from Expression Profiles using Least Trimmed Squares |
| farff | A Faster 'ARFF' File Reader and Writer |
| FarmSelect | Factor Adjusted Robust Model Selection |
| FarmTest | Factor-Adjusted Robust Multiple Testing |
| farrell | Interactive Interface to Data Envelopment Analysis Modeling |
| farver | High Performance Colour Space Manipulation |
| FASeg | Joint Segmentation of Correlated Time Series |
| fAsianOptions | Rmetrics - EBM and Asian Option Valuation |
| fasjem | A Fast and Scalable Joint Estimator for Learning Multiple Related Sparse Gaussian Graphical Models |
| fAssets | Rmetrics - Analysing and Modelling Financial Assets |
| fasstr | Analyze, Summarize, and Visualize Daily Streamflow Data |
| fasta | Fast Adaptive Shrinkage/Thresholding Algorithm |
| fastAdaboost | a Fast Implementation of Adaboost |
| fastai | Interface to 'fastai' |
| FastBandChol | Fast Estimation of a Covariance Matrix by Banding the Cholesky Factor |
| fastclime | A Fast Solver for Parameterized LP Problems, Constrained L1 Minimization Approach to Sparse Precision Matrix Estimation and Dantzig Selector |
| fastcluster | Fast Hierarchical Clustering Routines for R and 'Python' |
| fastcmh | Significant Interval Discovery with Categorical Covariates |
| fastcmprsk | Fine-Gray Regression via Forward-Backward Scan |
| fastcox | Lasso and Elastic-Net Penalized Cox's Regression in High Dimensions Models using the Cocktail Algorithm |
| FastCUB | Fast EM and Best-Subset Selection for CUB Models for Rating Data |
| fastdigest | Fast, Low Memory-Footprint Digests of R Objects |
| fastDummies | Fast Creation of Dummy (Binary) Columns and Rows from Categorical Variables |
| fasteraster | Raster Image Processing and Vector Recognition |
| fasterElasticNet | An Amazing Fast Way to Fit Elastic Net |
| fasterize | Fast Polygon to Raster Conversion |
| FastGaSP | Fast and Exact Computation of Gaussian Stochastic Process |
| fastGHQuad | Fast 'Rcpp' Implementation of Gauss-Hermite Quadrature |
| fastglm | Fast and Stable Fitting of Generalized Linear Models using 'RcppEigen' |
| FastGP | Efficiently Using Gaussian Processes with Rcpp and RcppEigen |
| fastGraph | Fast Drawing and Shading of Graphs of Statistical Distributions |
| FastHCS | Robust Algorithm for Principal Component Analysis |
| fastHICA | Hierarchical Independent Component Analysis: a Multi-Scale Sparse Non-Orthogonal Data-Driven Basis |
| fastICA | FastICA Algorithms to Perform ICA and Projection Pursuit |
| fastJT | Efficient Jonckheere-Terpstra Test Statistics |
| FastKM | A Fast Multiple-Kernel Method Based on a Low-Rank Approximation |
| fastkmedoids | Faster K-Medoids Clustering Algorithms: FastPAM, FastCLARA, FastCLARANS |
| FastKNN | Fast k-Nearest Neighbors |
| fastLink | Fast Probabilistic Record Linkage with Missing Data |
| fastlogitME | Basic Marginal Effects for Logit Models |
| fastlogranktest | A Fast Way to Calculate the p-Value of One or Multiple Log-Rank-Tests |
| FastLZeroSpikeInference | Fast Nonconvex Deconvolution of Calcium Imaging Data |
| fastM | Fast Computation of Multivariate M-Estimators |
| fastmap | Fast Data Structures |
| fastmaRching | Fast Marching Method for Modelling Evolving Boundaries |
| fastmatch | Fast match() function |
| fastmatrix | Fast Computation of some Matrices Useful in Statistics |
| fastmit | Fast Mutual Information Based Independence Test |
| fastNaiveBayes | Extremely Fast Implementation of a Naive Bayes Classifier |
| fastnet | Large-Scale Social Network Analysis |
| FastPCS | FastPCS Robust Fit of Multivariate Location and Scatter |
| fastpos | Finds the Critical Sequential Point of Stability for a Pearson Correlation |
| fastpseudo | Fast Pseudo Observations |
| fastqcr | Quality Control of Sequencing Data |
| fastR2 | Foundations and Applications of Statistics Using R (2nd Edition) |
| FastRCS | Fits the FastRCS Robust Multivariable Linear Regression Model |
| fastrmodels | Models for the 'nflfastR' Package |
| FastRWeb | Fast Interactive Framework for Web Scripting Using R |
| FastSF | Fast Structural Filtering |
| fastshap | Fast Approximate Shapley Values |
| fastSOM | Fast Calculation of Spillover Measures |
| fastStat | Faster for Statistic Work |
| fastTextR | An Interface to the 'fastText' Library |
| fasttime | Fast Utility Function for Time Parsing and Conversion |
| fat2Lpoly | Two-Locus Family-Based Association Test with Polytomous Outcome |
| FateID | Quantification of Fate Bias in Multipotent Progenitors |
| FatTailsR | Kiener Distributions and Fat Tails in Finance |
| FaultTree | Fault Trees for Risk and Reliability Analysis |
| faux | Simulation for Factorial Designs |
| fauxnaif | Convert Values to NA |
| fauxpas | HTTP Error Helpers |
| faviconPlease | Find the URL to the 'Favicon' for a Website |
| favnums | A Dataset of Favourite Numbers |
| FAwR | Functions and Datasets for "Forest Analytics with R" |
| fbar | An Extensible Approach to Flux Balance Analysis |
| fBasics | Rmetrics - Markets and Basic Statistics |
| fbati | Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families |
| FBFsearch | Algorithm for Searching the Space of Gaussian Directed Acyclic Graph Models Through Moment Fractional Bayes Factors |
| FBN | FISH Based Normalization and Copy Number inference of SNP microarray data |
| fBonds | Rmetrics - Pricing and Evaluating Bonds |
| fbRads | Analyzing and Managing Facebook Ads from R |
| fbRanks | Association Football (Soccer) Ranking via Poisson Regression |
| fbroc | Fast Algorithms to Bootstrap Receiver Operating Characteristics Curves |
| fbst | The Full Bayesian Significance Test and the e-Value |
| fc | Standard Evaluation-Based Multivariate Function Composition |
| fcaR | Formal Concept Analysis |
| fcd | Fused Community Detection |
| fCertificates | Basics of Certificates and Structured Products Valuation |
| FCGR | Fatigue Crack Growth in Reliability |
| FcircSEC | Full Length Circular RNA Sequence Extraction and Classification |
| fclust | Fuzzy Clustering |
| fcm | Inference of Fuzzy Cognitive Maps (FCMs) |
| FCMapper | Fuzzy Cognitive Mapping |
| fCopulae | Rmetrics - Bivariate Dependence Structures with Copulae |
| FCPS | Fundamental Clustering Problems Suite |
| fcr | Functional Concurrent Regression for Sparse Data |
| fcros | A Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations |
| FCSlib | A Collection of Fluorescence Fluctuation Spectroscopy Analysis Methods |
| fctbases | Functional Bases |
| fcuk | The Ultimate Helper for Clumsy Fingers |
| FD | Measuring functional diversity (FD) from multiple traits, and other tools for functional ecology |
| fda | Functional Data Analysis |
| fda.usc | Functional Data Analysis and Utilities for Statistical Computing |
| fdaACF | Autocorrelation Function for Functional Time Series |
| fdadensity | Functional Data Analysis for Density Functions by Transformation to a Hilbert Space |
| fdakma | Functional Data Analysis: K-Mean Alignment |
| fdaMixed | Functional Data Analysis in a Mixed Model Framework |
| fdANOVA | Analysis of Variance for Univariate and Multivariate Functional Data |
| fdaoutlier | Outlier Detection Tools for Functional Data Analysis |
| fdapace | Functional Data Analysis and Empirical Dynamics |
| fdaPDE | Statistical Analysis of Functional and Spatial Data, Based on Regression with PDE Regularization |
| fdaPOIFD | Partially Observed Integrated Functional Depth |
| fdasrvf | Elastic Functional Data Analysis |
| fdatest | Interval Testing Procedure for Functional Data |
| FDboost | Boosting Functional Regression Models |
| fdcov | Analysis of Covariance Operators |
| fddm | Fast Implementation of the Diffusion Decision Model |
| fdistr | Frequency Distribution Tables |
| fdm2id | Data Mining and R Programming for Beginners |
| fDMA | Dynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes |
| fdq | Forest Data Quality |
| fdrci | Permutation-Based FDR Point and Confidence Interval Estimation |
| fdrDiscreteNull | False Discovery Rate Procedures Under Discrete and Heterogeneous Null Distributions |
| FDRestimation | Estimate, Plot, and Summarize False Discovery Rates |
| FDRreg | False discovery rate regression |
| FDRsampsize | Compute Sample Size that Meets Requirements for Average Power and FDR |
| FDRSeg | FDR-Control in Multiscale Change-Point Segmentation |
| fdrtool | Estimation of (Local) False Discovery Rates and Higher Criticism |
| fds | Functional Data Sets |
| fdth | Frequency Distribution Tables, Histograms and Polygons |
| FDX | False Discovery Exceedance Controlling Multiple Testing Procedures |
| FeaLect | Scores Features for Feature Selection |
| feamiR | Classification and Feature Selection for microRNA/mRNA Interactions |
| feasts | Feature Extraction and Statistics for Time Series |
| feather | R Bindings to the Feather 'API' |
| feature | Local Inferential Feature Significance for Multivariate Kernel Density Estimation |
| featureCorMatrix | Measurement Level Independent Feature Correlation Matrix |
| featurefinder | Feature Finder |
| featureflag | Turn Features On and Off using Feature Flags |
| FeatureHashing | Creates a Model Matrix via Feature Hashing with a Formula Interface |
| FeatureImpCluster | Feature Importance for Partitional Clustering |
| features | Feature Extraction for Discretely-Sampled Functional Data |
| featuretoolsR | Interact with the 'Python' Module 'Featuretools' |
| featurizer | Some Helper Functions that Help Create Features from Data |
| fec16 | Data Package for the 2016 United States Federal Elections |
| fechner | Fechnerian Scaling of Discrete Object Sets |
| FedData | Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources |
| federalregister | Client Package for the U.S. Federal Register API |
| fedregs | Text Analysis of the US Code of Federal Regulations |
| FeedbackTS | Analysis of Feedback in Time Series |
| feedeR | Read RSS, Atom and RDF Feeds |
| feisr | Estimating Fixed Effects Individual Slope Models |
| fellov | Feasible Ellipse Overlap |
| felp | Functional Help for Functions, Objects, and Packages |
| fence | Using Fence Methods for Model Selection |
| FENmlm | Fixed Effects Nonlinear Maximum Likelihood Models |
| FEprovideR | Fixed Effects Logistic Model with High-Dimensional Parameters |
| FER | Financial Engineering in R (FER) |
| fergm | Estimation and Fit Assessment of Frailty Exponential Random Graph Models |
| fermicatsR | Fermi Large Area Telescope Catalogs |
| FertBoot | Fertilizer Response Curve Analysis by Bootstrapping Residuals |
| FESta | Fishing Effort Standardisation |
| fExoticOptions | Rmetrics - Pricing and Evaluating Exotic Option |
| fExpressCertificates | Structured Products Valuation for ExpressCertificates/Autocallables |
| fExtremes | Rmetrics - Modelling Extreme Events in Finance |
| ff | Memory-Efficient Storage of Large Data on Disk and Fast Access Functions |
| ffbase | Basic Statistical Functions for Package 'ff' |
| FFD | Freedom from Disease |
| FFdownload | Download Data from Kenneth French's Website |
| FField | Force field simulation for a set of points |
| fflr | Collect ESPN Fantasy Football Data |
| ffmanova | Fifty-Fifty MANOVA |
| ffmetadata | Access to Fragile Families Metadata |
| ffscrapr | API Client for Fantasy Football League Platforms |
| ffstream | Forgetting Factor Methods for Change Detection in Streaming Data |
| fftw | Fast FFT and DCT Based on the FFTW Library |
| fftwtools | Wrapper for 'FFTW3' Includes: One-Dimensional, Two-Dimensional, Three-Dimensional, and Multivariate Transforms |
| fgac | Generalized Archimedean Copula |
| FGalgorithm | Flury and Gautschi algorithms |
| fGarch | Rmetrics - Autoregressive Conditional Heteroskedastic Modelling |
| fgdr | Utilities for Fundamental Geo-Spatial Data |
| fgeo | Analyze Forest Diversity and Dynamics |
| fgeo.analyze | Analyze ForestGEO Data |
| fgeo.plot | Plot ForestGEO Data |
| fgeo.tool | Import and Manipulate ForestGEO Data |
| fgeo.x | Access Small ForestGEO Datasets For Examples |
| fgm | Partial Separability and Functional Gaussian Graphical Models |
| Fgmutils | Forest Growth Model Utilities |
| fgof | Fast Goodness-of-fit Test |
| fgpt | Floating Grid Permutation Technique |
| FGSG | Feature Grouping and Selection Over an Undirected Graph |
| fgui | Function GUI |
| FHDI | Fractional Hot Deck and Fully Efficient Fractional Imputation |
| fhidata | Structural Data for Norway |
| fhircrackr | Handling HL7 FHIR Resources in R |
| fHMM | Fitting Hidden Markov Models to Financial Data |
| FHtest | Tests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class |
| FI | Provide functions for forest inventory calculations |
| fiberLD | Fiber Length Determination |
| fic | Focused Information Criteria for Model Comparison |
| fICA | Classical, Reloaded and Adaptive FastICA Algorithms |
| fieldRS | Remote Sensing Field Work Tools |
| fields | Tools for Spatial Data |
| FieldSim | Random Fields (and Bridges) Simulations |
| fiery | A Lightweight and Flexible Web Framework |
| filehash | Simple Key-Value Database |
| filehashSQLite | Simple key-value database using SQLite |
| filelock | Portable File Locking |
| filematrix | File-Backed Matrix Class with Convenient Read and Write Access |
| filenamer | Easy Management of File Names |
| files | Effective File Navigation from the R Console |
| filesstrings | Handy File and String Manipulation |
| FILEST | Fine-Level Structure Simulator |
| filling | Matrix Completion, Imputation, and Inpainting Methods |
| fillr | Fill Missing Values in Vectors |
| fImport | Rmetrics - Importing Economic and Financial Data |
| finalfit | Quickly Create Elegant Regression Results Tables and Plots when Modelling |
| FinAna | Financial Analysis and Regression Diagnostic Analysis |
| FinancialInstrument | Financial Instrument Model Infrastructure and Meta-Data |
| FinancialMath | Financial Mathematics for Actuaries |
| FinAsym | Classifies implicit trading activity from market quotes and computes the probability of informed trading |
| finbif | Interface for the 'Finnish Biodiversity Information Facility' API |
| FinCal | Time Value of Money, Time Series Analysis and Computational Finance |
| finch | Parse Darwin Core Files |
| FinCovRegularization | Covariance Matrix Estimation and Regularization for Finance |
| FindAllRoots | Find all root(s) of the equation and Find root(s) of the equation by dichotomy |
| findInFiles | Find Pattern in Files |
| FindIt | Finding Heterogeneous Treatment Effects |
| findpython | Functions to Find an Acceptable Python Binary |
| findR | Find Code Snippets, R Scripts, R Markdown, PDF and Text Files with Pattern Matching |
| findviews | A View Generator for Multidimensional Data |
| FinePop | Fine-Scale Population Analysis |
| FinePop2 | Fine-Scale Population Analysis (Rewrite for Gene-Trait-Environment Interaction Analysis) |
| finetune | Additional Functions for Model Tuning |
| fingerprint | Functions to Operate on Binary Fingerprint Data |
| fingerPro | Sediment Source Fingerprinting |
| finiteruinprob | Computation of the Probability of Ruin Within a Finite Time Horizon |
| finity | Test for Finiteness of Moments in a Distribution |
| finreportr | Financial Data from U.S. Securities and Exchange Commission |
| FinTS | Companion to Tsay (2005) Analysis of Financial Time Series |
| fipe | Access to Average Purchase Price of Vehicles in Brazil |
| fipp | Induced Priors in Bayesian Mixture Models |
| FiRE | Finder of Rare Entities (FiRE) |
| firebase | Integrates 'Google Firebase' Authentication Method with 'Shiny' |
| firebehavioR | Prediction of Wildland Fire Behavior and Hazard |
| FiSh | Fisher-Shannon Method |
| fishbc | Fishes of British Columbia |
| fishdata | A Small Collection of Fish Population Datasets |
| FisherEM | The FisherEM Algorithm to Simultaneously Cluster and Visualize High-Dimensional Data |
| fisheyeR | Fisheye and Hyperbolic-space-alike Interactive Visualization Tools in R |
| fishflux | Model Elemental Fluxes in Fishes |
| FisHiCal | Iterative FISH-based Calibration of Hi-C Data |
| fishkirkko2015 | Dataset of Measurements of Fish Species at Kirkkojarvi Lake, Finland |
| fishmethods | Fishery Science Methods and Models |
| fishMod | Fits Poisson-Sum-of-Gammas GLMs, Tweedie GLMs, and Delta Log-Normal Models |
| fishmove | Prediction of Fish Movement Parameters |
| FishResp | Analytical Tool for Aquatic Respirometry |
| fishtree | Interface to the Fish Tree of Life API |
| fishualize | Color Palettes Based on Fish Species |
| FisPro | Fuzzy Inference System Design and Optimization |
| FIT | Transcriptomic Dynamics Models in Field Conditions |
| fit.models | Compare Fitted Models |
| FitAR | Subset AR Model Fitting |
| FitARMA | Fit ARMA or ARIMA Using Fast MLE Algorithm |
| fitbitScraper | Scrapes Data from Fitbit |
| fitConic | Fit Data to Any Conic Section |
| fitdc | Garmin FIT File Decoder |
| fitdistrplus | Help to Fit of a Parametric Distribution to Non-Censored or Censored Data |
| fitDRC | Fitting Density Ratio Classes |
| fitHeavyTail | Mean and Covariance Matrix Estimation under Heavy Tails |
| fitODBOD | Modeling Over Dispersed Binomial Outcome Data Using BMD and ABD |
| fitplc | Fit Hydraulic Vulnerability Curves |
| fitPoly | Genotype Calling for Bi-Allelic Marker Assays |
| FITSio | FITS (Flexible Image Transport System) Utilities |
| fitteR | Fit Hundreds of Theoretical Distributions to Empirical Data |
| fitTetra | fitTetra is an R package for assigning tetraploid genotype scores |
| FitUltD | Fit Univariate Mixed and Usual Distributions |
| fitur | Fit Univariate Distributions |
| fitzRoy | Easily Scrape and Process AFL Data |
| fivethirtyeight | Data and Code Behind the Stories and Interactives at 'FiveThirtyEight' |
| FixedPoint | Algorithms for Finding Fixed Point Vectors of Functions |
| fixedTimeEvents | The Distribution of Distances Between Discrete Events in Fixed Time |
| fixerapi | An R Client for the "Fixer.io" Currency API |
| fixest | Fast Fixed-Effects Estimations |
| FixSeqMTP | Fixed Sequence Multiple Testing Procedures |
| fizzbuzzR | Fizz Buzz Implementation |
| FKF | Fast Kalman Filter |
| FKF.SP | Fast Kalman Filtering Through Sequential Processing |
| FKSUM | Fast Kernel Sums |
| flacco | Feature-Based Landscape Analysis of Continuous and Constrained Optimization Problems |
| flagr | Implementation of Flag Aggregation |
| flair | Highlight, Annotate, and Format your R Source Code |
| flam | Fits Piecewise Constant Models with Data-Adaptive Knots |
| FLAME | Interpretable Matching for Causal Inference |
| flamingos | Functional Latent Data Models for Clustering Heterogeneous Curves ('FLaMingos') |
| flan | FLuctuation ANalysis on Mutation Models |
| flare | Family of Lasso Regression |
| flars | Functional LARS |
| flashCard | Create a Flash Card |
| flashClust | Implementation of optimal hierarchical clustering |
| flashlight | Shed Light on Black Box Machine Learning Models |
| flatr | Transforms Contingency Tables to Data Frames, and Analyses Them |
| flattabler | Obtaining a Flat Table from Pivot Tables |
| flatxml | Tools for Working with XML Files as R Dataframes |
| flexclust | Flexible Cluster Algorithms |
| flexCWM | Flexible Cluster-Weighted Modeling |
| flexdashboard | R Markdown Format for Flexible Dashboards |
| FlexDir | Tools to Work with the Flexible Dirichlet Distribution |
| FlexGAM | Generalized Additive Models with Flexible Response Functions |
| flexiblas | 'FlexiBLAS' API Interface |
| flexmet | Flexible Latent Trait Metrics using the Filtered Monotonic Polynomial Item Response Model |
| flexmix | Flexible Mixture Modeling |
| flexmixNL | Finite Mixture Modeling of Generalized Nonlinear Models |
| FlexParamCurve | Tools to Fit Flexible Parametric Curves |
| flexpolyline | Flexible Polyline Encoding |
| FlexReg | Regression Models for Bounded Responses |
| flexrsurv | Flexible Relative Survival Analysis |
| FlexScan | Flexible Scan Statistics |
| flexsurv | Flexible Parametric Survival and Multi-State Models |
| flexsurvcure | Flexible Parametric Cure Models |
| flextable | Functions for Tabular Reporting |
| FlickrAPI | Access to Flickr API |
| flifo | Don't Get Stuck with Stacks in R |
| flightplanning | UAV Flight Planning |
| flightplot | Plotting Flight Paths on Maps |
| FLightR | Reconstruct Animal Paths from Solar Geolocation Loggers Data |
| flip | Multivariate Permutation Tests |
| flipdownr | Implement a Countdown in 'RMarkdown' Documents and 'shiny' Applications |
| flippant | Dithionite Scramblase Assay Analysis |
| flipr | Flexible Inference via Permutations in R |
| flipscores | Robust Score Testing in GLMs, by Sign-Flip Contributions |
| FLLat | Fused Lasso Latent Feature Model |
| float | 32-Bit Floats |
| flobr | Convert Files to and from Binary Objects (BLOBs) |
| flock | Process Synchronization Using File Locks |
| flood | Statistical Methods for the (Regional) Analysis of Flood Frequency |
| flora | Tools for Interacting with the Brazilian Flora 2020 |
| florestal | Results for Forest Inventories |
| flower | Tools for characterizing flowering traits |
| flowfield | Forecasts future values of a univariate time series |
| flowr | Streamlining Design and Deployment of Complex Workflows |
| FlowRegEnvCost | The Environmental Costs of Flow Regulation |
| FlowScreen | Daily Streamflow Trend and Change Point Screening |
| FLR | Fuzzy Logic Rule Classifier |
| flsa | Path Algorithm for the General Fused Lasso Signal Approximator |
| FLSSS | Mining Rigs for Specialized Subset Sum, Multi-Subset Sum, Multidimensional Subset Sum, Multidimensional Knapsack, Generalized Assignment Problems |
| FluMoDL | Influenza-Attributable Mortality with Distributed-Lag Models |
| fluoSurv | Estimate Insect Survival from Fluorescence Data |
| fluspect | Fluspect-B |
| flux | Flux rate calculation from dynamic closed chamber measurements |
| fluxweb | Estimate Energy Fluxes in Food Webs |
| flying | Simulation of Bird Flight Range |
| FlyingR | Simulation of Bird Flight Range |
| fma | Data Sets from "Forecasting: Methods and Applications" by Makridakis, Wheelwright & Hyndman (1998) |
| FMAdist | Frequentist Model Averaging Distribution |
| fmbasics | Financial Market Building Blocks |
| FMC | Factorial Experiments with Minimum Level Changes |
| FMCCSD | Efficient Estimation of Clustered Current Status Data |
| fmcmc | A friendly MCMC framework |
| fmdates | Financial Market Date Calculations |
| FME | A Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability and Monte Carlo Analysis |
| fmerPack | Tools of Heterogeneity Pursuit via Finite Mixture Effects Model |
| fmf | Fast Class Noise Detector with Multi-Factor-Based Learning |
| FMM | Rhythmic Patterns Modeling by FMM Models |
| FMP | Filtered Monotonic Polynomial IRT Models |
| fmpcloudr | R Access to the 'FMP Cloud' and 'Financial Modeling Prep' API |
| FMradio | Factor Modeling for Radiomics Data |
| fmri | Analysis of fMRI Experiments |
| fmriqa | Functional MRI Quality Assurance Routines |
| fmsb | Functions for Medical Statistics Book with some Demographic Data |
| FMsmsnReg | Regression Models with Finite Mixtures of Skew Heavy-Tailed Errors |
| FMStable | Finite Moment Stable Distributions |
| fmtr | Easily Apply Formats to Data |
| fMultivar | Rmetrics - Analysing and Modeling Multivariate Financial Return Distributions |
| FNN | Fast Nearest Neighbor Search Algorithms and Applications |
| fNonlinear | Rmetrics - Nonlinear and Chaotic Time Series Modelling |
| FOCI | Feature Ordering by Conditional Independence |
| focusedMDS | Focused, Interactive Multidimensional Scaling |
| foghorn | Summarize CRAN Check Results in the Terminal |
| foieGras | Fit Continuous-Time State-Space and Latent Variable Models for Quality Control of Argos Satellite (and Other) Telemetry Data and for Estimating Movement Behaviour |
| folderfun | Creates and Manages Folder Functions for Portable Large-Scale R Analysis |
| folio | Datasets for Teaching Archaeology and Paleontology |
| fontawesome | Easily Work with 'Font Awesome' Icons |
| fontBitstreamVera | Fonts with 'Bitstream Vera Fonts' License |
| fontcm | Computer Modern font for use with extrafont package |
| fontHind | Additional 'ggplot2' Themes Using 'Hind' Fonts |
| fontLiberation | Liberation Fonts |
| fontMPlus | Additional 'ggplot2' Themes Using 'M+' Fonts |
| fontquiver | Set of Installed Fonts |
| foodingraph | Food Network Inference and Visualization |
| foodweb | visualisation and analysis of food web networks |
| foolbox | Function Manipulation Toolbox |
| footprint | Calculate Air Travel Emissions |
| fOptions | Rmetrics - Pricing and Evaluating Basic Options |
| forams | Foraminifera and Community Ecology Analyses |
| forcats | Tools for Working with Categorical Variables (Factors) |
| foreach | Provides Foreach Looping Construct |
| ForeCA | Forecastable Component Analysis |
| forecast | Forecasting Functions for Time Series and Linear Models |
| ForecastComb | Forecast Combination Methods |
| ForecastCombinations | Forecast Combinations |
| forecastHybrid | Convenient Functions for Ensemble Time Series Forecasts |
| forecastML | Time Series Forecasting with Machine Learning Methods |
| forecastSNSTS | Forecasting for Stationary and Non-Stationary Time Series |
| ForecastTB | Test Bench for the Comparison of Forecast Methods |
| FoReco | Point Forecast Reconciliation |
| forecTheta | Forecasting Time Series by Theta Models |
| foreign | Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ... |
| forensic | Statistical Methods in Forensic Genetics |
| forensim | Statistical tools for the interpretation of forensic DNA mixtures |
| foreSIGHT | Systems Insights from Generation of Hydroclimatic Timeseries |
| forestControl | Approximate False Positive Rate Control in Selection Frequency for Random Forest |
| ForestDisc | Forest Discretization |
| forestError | A Unified Framework for Random Forest Prediction Error Estimation |
| ForestFit | Statistical Modelling for Plant Size Distributions |
| ForestGapR | Tropical Forest Canopy Gaps Analysis |
| forestHES | Forest Health Evaluation System at the Forest Stand Level in China |
| forestinventory | Design-Based Global and Small-Area Estimations for Multiphase Forest Inventories |
| forestmangr | Forest Mensuration and Management |
| forestmodel | Forest Plots from Regression Models |
| forestplot | Advanced Forest Plot Using 'grid' Graphics |
| forestr | Ecosystem and Canopy Structural Complexity Metrics from LiDAR |
| forestRK | Implements the Forest-R.K. Algorithm for Classification Problems |
| forestry | Reshape Data Tree |
| ForestTools | Analyzing Remotely Sensed Forest Data |
| foretell | Projecting Customer Retention Based on Fader and Hardie Probability Models |
| forge | Casting Values into Shape |
| ForImp | Imputation of Missing Values Through a Forward Imputation Algorithm |
| ForIT | Functions from the 2nd Italian Forest Inventory (INFC) |
| formatR | Format R Code Automatically |
| formattable | Create 'Formattable' Data Structures |
| Formula | Extended Model Formulas |
| formula.tools | Programmatic Utilities for Manipulating Formulas, Expressions, Calls, Assignments and Other R Objects |
| formulaic | Dynamic Generation and Quality Checks of Formula Objects |
| formulops | Mathematical Operations on R Formula |
| forrel | Forensic Pedigree Analysis and Relatedness Inference |
| fortunes | R Fortunes |
| forward | Robust Analysis using Forward Search |
| forwards | Data from Surveys Conducted by Forwards |
| ForwardSearch | Forward Search using asymptotic theory |
| fossil | Palaeoecological and Palaeogeographical Analysis Tools |
| FossilSim | Simulation of Fossil and Taxonomy Data |
| foster | Forest Structure Extrapolation with R |
| foto | Fourier Transform Textural Ordination |
| FourgameteP | FourGamete Test |
| fourierin | Computes Numeric Fourier Integrals |
| fourPNO | Bayesian 4 Parameter Item Response Model |
| FourScores | A Game for Human vs. Human or Human vs. AI |
| fpa | Spatio-Temporal Fixation Pattern Analysis |
| fpc | Flexible Procedures for Clustering |
| fpca | Restricted MLE for Functional Principal Components Analysis |
| FPCA2D | Two Dimensional Functional Principal Component Analysis |
| FPCA3D | Three Dimensional Functional Component Analysis |
| fpCompare | Reliable Comparison of Floating Point Numbers |
| FPDclustering | PD-Clustering and Factor PD-Clustering |
| fpeek | Check Text Files Content at a Glance |
| fpest | Estimating Finite Population Total |
| fplot | Automatic Distribution Graphs Using Formulas |
| fplyr | Apply Functions to Blocks of Files |
| fpmoutliers | Frequent Pattern Mining Outliers |
| fpop | Segmentation using Optimal Partitioning and Function Pruning |
| fPortfolio | Rmetrics - Portfolio Selection and Optimization |
| fpow | Computing the noncentrality parameter of the noncentral F distribution |
| fpp | Data for "Forecasting: principles and practice" |
| fpp2 | Data for "Forecasting: Principles and Practice" (2nd Edition) |
| fpp3 | Data for "Forecasting: Principles and Practice" (3rd Edition) |
| fptdApprox | Approximation of First-Passage-Time Densities for Diffusion Processes |
| FPV | Testing Hypotheses via Fuzzy P-Value in Fuzzy Environment |
| fracdiff | Fractionally Differenced ARIMA aka ARFIMA(P,d,q) Models |
| fracprolif | Fraction Proliferation via a Quiescent Growth Model |
| fractaldim | Estimation of fractal dimensions |
| FractalParameterEstimation | Simulation and Parameter Estimation of Randomized Sierpinski Carpets using the p-p-p-q-Model |
| fractD | Estimation of Fractal Dimension of a Black Area in 2D and 3D (Slices) Images |
| FRACTION | Numeric number into fraction |
| fractional | Vulgar Fractions in R |
| fracture | Convert Decimals to Fractions |
| fragility | Assessing and Visualizing Fragility of Clinical Results with Binary Outcomes |
| Fragman | Fragment Analysis in R |
| frailtyEM | Fitting Frailty Models with the EM Algorithm |
| frailtyHL | Frailty Models via Hierarchical Likelihood |
| frailtypack | General Frailty Models: Shared, Joint and Nested Frailty Models with Prediction; Evaluation of Failure-Time Surrogate Endpoints |
| frailtySurv | General Semiparametric Shared Frailty Model |
| frair | Tools for Functional Response Analysis |
| frambgrowth | Simulation of the Growth of Framboidal and Sunflower Pyrite |
| Frames2 | Estimation in Dual Frame Surveys |
| franc | Detect the Language of Text |
| FRAPO | Financial Risk Modelling and Portfolio Optimisation with R |
| frapplot | Automatic Data Processing and Visualization for FRAP |
| frbs | Fuzzy Rule-Based Systems for Classification and Regression Tasks |
| FRCC | Fast Regularized Canonical Correlation Analysis |
| frechet | Statistical Analysis for Random Objects and Non-Euclidean Data |
| fredr | An R Client for the 'FRED' API |
| freealg | The Free Algebra |
| freedom | Demonstration of Disease Freedom (DDF) |
| freegroup | The Free Group |
| FreeSortR | Free Sorting Data Analysis |
| freesurfer | Wrapper Functions for 'Freesurfer' |
| freesurferformats | Read and Write 'FreeSurfer' Neuroimaging File Formats |
| FREEtree | Tree Method for High Dimensional Longitudinal Data |
| freetypeharfbuzz | Deterministic Computation of Text Box Metrics |
| fRegression | Rmetrics - Regression Based Decision and Prediction |
| frenchCurve | Generate Open or Closed Interpolating Curves |
| FREQ | FREQ: Estimate population size from capture frequencies |
| freqdist | Frequency Distribution |
| freqdom | Frequency Domain Based Analysis: Dynamic PCA |
| freqdom.fda | Functional Time Series: Dynamic Functional Principal Components |
| freqparcoord | Novel Methods for Parallel Coordinates |
| FreqProf | Frequency Profiles Computing and Plotting |
| freqtables | Make Quick Descriptive Tables for Categorical Variables |
| frequency | Easy Frequency Tables |
| frequencyConnectedness | Spectral Decomposition of Connectedness Measures |
| frequentdirections | Implementation of Frequent-Directions Algorithm for Efficient Matrix Sketching |
| FRESA.CAD | Feature Selection Algorithms for Computer Aided Diagnosis |
| fresh | Create Custom 'Bootstrap' Themes to Use in 'Shiny' |
| FrF2 | Fractional Factorial Designs with 2-Level Factors |
| FrF2.catlg128 | Catalogues of resolution IV 128 run 2-level fractional factorials up to 33 factors that do have 5-letter words |
| friends | The Entire Transcript from Friends in Tidy Format |
| fritools | Utilities for the Forest Research Institute of the State Baden-Wuerttemberg |
| FRK | Fixed Rank Kriging |
| fRLR | Fit Repeated Linear Regressions |
| frm | Regression Analysis of Fractional Responses |
| frmhet | Regression Analysis of Fractional Responses Under Unobserved Heterogeneity |
| frmpd | Regression Analysis of Panel Fractional Responses |
| frmqa | The Generalized Hyperbolic Distribution, Related Distributions and Their Applications in Finance |
| fromo | Fast Robust Moments |
| frontier | Stochastic Frontier Analysis |
| frontiles | Partial Frontier Efficiency Analysis |
| frost | Prediction of Minimum Temperature for Frost Forecasting in Agriculture |
| frostr | R API to MET Norway's 'Frost' API |
| fruclimadapt | Evaluation Tools for Assessing Climate Adaptation of Fruit Tree Species |
| fs | Cross-Platform File System Operations Based on 'libuv' |
| FSA | Simple Fisheries Stock Assessment Methods |
| FSAdata | Data to Support Fish Stock Assessment ('FSA') Package |
| fsbrain | Managing and Visualizing Brain Surface Data |
| fscaret | Automated Feature Selection from 'caret' |
| FSDAM | Forward Stepwise Deep Autoencoder-Based Monotone NLDR |
| fsdaR | Robust Data Analysis Through Monitoring and Dynamic Visualization |
| FSelector | Selecting Attributes |
| FSelectorRcpp | 'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support |
| fsia | Import and Analysis of OMR Data from FormScanner |
| FSinR | Feature Selection |
| FSInteract | Fast Searches for Interactions |
| FSK2R | An Interface Between the 'FSK-ML' Standard and 'R' |
| fslr | Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB') |
| fsMTS | Feature Selection for Multivariate Time Series |
| FSMUMI | Imputation of Time Series Based on Fuzzy Logic |
| fsn | Rosenthal's Fail Safe Number and Related Functions |
| fso | Fuzzy Set Ordination |
| fspe | Estimating the Number of Factors in EFA with Out-of-Sample Prediction Errors |
| fSRM | Social Relations Analyses with Roles ("Family SRM") |
| fssemR | Fused Sparse Structural Equation Models to Jointly Infer Gene Regulatory Network |
| FSSF | Generate Fully-Sequential Space-Filling Designs Inside a Unit Hypercube |
| fst | Lightning Fast Serialization of Data Frames |
| Fstability | Calculate Feature Stability |
| fstcore | R Bindings to the 'Fstlib' Library |
| fsthet | Fst-Heterozygosity Smoothed Quantiles |
| FSTpackage | Unified Sequence-Based Association Tests Allowing for Multiple Functional Annotation Scores |
| ftDK | A Wrapper for the API of the Danish Parliament |
| ftExtra | Extensions for 'Flextable' |
| ftnonpar | Features and Strings for Nonparametric Regression |
| fTrading | Rmetrics - Trading and Rebalancing Financial Instruments |
| ftrCOOL | Feature Extraction from Biological Sequences |
| fts | R Interface to 'tslib' (a Time Series Library in C++) |
| ftsa | Functional Time Series Analysis |
| ftsspec | Spectral Density Estimation and Comparison for Functional Time Series |
| fuel | Framework for Unified Estimation in Lognormal Models |
| fueleconomy | EPA Fuel Economy Data |
| fugeR | FUzzy GEnetic, a machine learning algorithm to construct prediction model based on fuzzy logic |
| fugue | Sensitivity Analysis Optimized for Matched Sets of Varied Sizes |
| fullfact | Full Factorial Breeding Analysis |
| fullROC | Plot Full ROC Curves using Eyewitness Lineup Data |
| fulltext | Full Text of 'Scholarly' Articles Across Many Data Sources |
| fun | Use R for Fun |
| func2vis | Clean and Visualize Over Expression Results from 'ConsensusPathDB' |
| FunCC | Functional Cheng and Church Bi-Clustering |
| funchir | Convenience Functions by Michael Chirico |
| FunChisq | Model-Free Functional Chi-Squared and Exact Tests |
| FunCluster | Functional Profiling of Microarray Expression Data |
| FuncMap | Hive Plots of R Package Function Calls |
| FuncNN | Functional Neural Networks |
| functClust | Functional Clustering of Redundant Components of a System |
| functional | Curry, Compose, and other higher-order functions |
| functiondepends | Find Functions and their Dependencies |
| functools | Functional Programming in R |
| funData | An S4 Class for Functional Data |
| fundiversity | Easy Computation of Alpha Functional Diversity Indices |
| funest | Functional Ensemble Survival Tree for Dynamic Prediction |
| funFEM | Clustering in the Discriminative Functional Subspace |
| fungible | Psychometric Functions from the Waller Lab |
| funGp | Gaussian Process Models for Scalar and Functional Inputs |
| funHDDC | Univariate and Multivariate Model-Based Clustering in Group-Specific Functional Subspaces |
| funique | A Faster Unique Function |
| fUnitRoots | Rmetrics - Modelling Trends and Unit Roots |
| funLBM | Model-Based Co-Clustering of Functional Data |
| funModeling | Exploratory Data Analysis and Data Preparation Tool-Box |
| funneljoin | Time-Based Joins to Analyze Sequences of Events |
| FunnelPlotR | Funnel Plots for Comparing Institutional Performance |
| funnelR | Funnel Plots for Proportion Data |
| funprog | Functional Programming |
| funr | Simple Utility Providing Terminal Access to all R Functions |
| funrar | Functional Rarity Indices Computation |
| funreg | Functional Regression for Irregularly Timed Data |
| FUNTA | Functional Tangential Angle Pseudo-Depth |
| funtimes | Functions for Time Series Analysis |
| FunWithNumbers | Fun with Fractions and Number Sequences |
| furniture | Furniture for Quantitative Scientists |
| furrr | Apply Mapping Functions in Parallel using Futures |
| fusedest | Block Splitting Algorithm for Estimation with Fused Penalty Functions |
| fuser | Fused Lasso for High-Dimensional Regression over Groups |
| fusionchartsR | Embedding 'FusionCharts Javascript' Library in R |
| fusionclust | Clustering and Feature Screening using L1 Fusion Penalty |
| FusionLearn | Fusion Learning |
| futile.logger | A Logging Utility for R |
| futile.options | Futile Options Management |
| futile.paradigm | A framework for working in a functional programming paradigm in R |
| futility | Interim Analysis of Operational Futility in Randomized Trials with Time-to-Event Endpoints and Fixed Follow-Up |
| future | Unified Parallel and Distributed Processing in R for Everyone |
| future.apply | Apply Function to Elements in Parallel using Futures |
| future.batchtools | A Future API for Parallel and Distributed Processing using 'batchtools' |
| future.callr | A Future API for Parallel Processing using 'callr' |
| future.tests | Test Suite for 'Future' API Backends |
| futureheatwaves | Find, Characterize, and Explore Extreme Events in Climate Projections |
| fuzzr | Fuzz-Test R Functions |
| Fuzzy.p.value | Computing Fuzzy p-Value |
| FuzzyAHP | (Fuzzy) AHP Calculation |
| fuzzyFDR | Exact calculation of fuzzy decision rules for multiple testing |
| fuzzyforest | Fuzzy Forests |
| fuzzyjoin | Join Tables Together on Inexact Matching |
| FuzzyLP | Fuzzy Linear Programming |
| FuzzyMCDM | Multi-Criteria Decision Making Methods for Fuzzy Data |
| FuzzyNumbers | Tools to Deal with Fuzzy Numbers |
| FuzzyNumbers.Ext.2 | Apply Two Fuzzy Numbers on a Monotone Function |
| FuzzyQ | Fuzzy Quantification of Common and Rare Species |
| FuzzyR | Fuzzy Logic Toolkit for R |
| fuzzyRankTests | Fuzzy Rank Tests and Confidence Intervals |
| fuzzyreg | Fuzzy Linear Regression |
| fuzzySim | Fuzzy Similarity in Species Distributions |
| FuzzyStatProb | Fuzzy Stationary Probabilities from a Sequence of Observations of an Unknown Markov Chain |
| FuzzyStatTra | Statistical Methods for Trapezoidal Fuzzy Numbers |
| FuzzySTs | Fuzzy Statistical Tools |
| FuzzyToolkitUoN | Type 1 Fuzzy Logic Toolkit |
| fuzzywuzzyR | Fuzzy String Matching |
| FWDselect | Selecting Variables in Regression Models |
| fwi.fbp | Fire Weather Index System and Fire Behaviour Prediction System Calculations |
| fwildclusterboot | Fast Wild Cluster Bootstrap Inference for Linear Regression Models |
| fwsim | Fisher-Wright Population Simulation |
| fxregime | Exchange Rate Regime Analysis |
| fxTWAPLS | An Improved Version of WA-PLS |
| fy | Utilities for Financial Years |
| g.data | Delayed-Data Packages |
| G1DBN | A package performing Dynamic Bayesian Network inference |
| g2f | Find and Fill Gaps in Metabolic Networks |
| G2Sd | Grain-Size Statistics and Description of Sediment |
| g3viz | Interactively Visualize Genetic Mutation Data using a Lollipop-Diagram |
| GA | Genetic Algorithms |
| GAabbreviate | Abbreviating Items Measures using Genetic Algorithms |
| GABi | Framework for Generalized Subspace Pattern Mining |
| GACFF | Genetic Similarity in User-Based Collaborative Filtering |
| GAD | GAD: Analysis of variance from general principles |
| GADAG | A Genetic Algorithm for Learning Directed Acyclic Graphs |
| gadget2 | Gadget is the Globally-Applicable Area Disaggregated General Ecosystem Toolbox |
| GaDiFPT | First Passage Time Simulation for Gaussian Diffusion Processes |
| GADMTools | Easy Use of 'GADM' Maps |
| gafit | Genetic Algorithm for Curve Fitting |
| gaiah | Genetic and Isotopic Assignment Accounting for Habitat Suitability |
| gainML | Machine Learning-Based Analysis of Potential Power Gain from Passive Device Installation on Wind Turbine Generators |
| gains | Lift (Gains) Tables and Charts |
| GAIPE | Graphical Extension with Accuracy in Parameter Estimation (GAIPE) |
| GALLO | Genomic Annotation in Livestock for Positional Candidate LOci |
| galts | Genetic Algorithms and C-Steps Based LTS (Least Trimmed Squares) Estimation |
| galvanizer | Interface to Galvanize 'Highbond' Internal Audit Software |
| gam | Generalized Additive Models |
| gama | Genetic Approach to Maximize Clustering Criterion |
| gamair | Data for 'GAMs: An Introduction with R' |
| gambin | Fit the Gambin Model to Species Abundance Distributions |
| gamboostLSS | Boosting Methods for 'GAMLSS' |
| gamboostMSM | Estimating multistate models using gamboost() |
| gamclass | Functions and Data for a Course on Modern Regression and Classification |
| gamCopula | Generalized Additive Models for Bivariate Conditional Dependence Structures and Vine Copulas |
| GAMens | Applies GAMbag, GAMrsm and GAMens Ensemble Classifiers for Binary Classification |
| gameofthrones | Palettes Inspired in the TV Show "Game of Thrones" |
| games | Statistical Estimation of Game-Theoretic Models |
| gamesGA | Genetic Algorithm for Sequential Symmetric Games |
| GameTheory | Cooperative Game Theory |
| GameTheoryAllocation | Tools for Calculating Allocations in Game Theory |
| gamlr | Gamma Lasso Regression |
| gamlss | Generalised Additive Models for Location Scale and Shape |
| gamlss.add | Extra Additive Terms for Generalized Additive Models for Location Scale and Shape |
| gamlss.cens | Fitting an Interval Response Variable Using ‘gamlss.family’ Distributions |
| gamlss.countKinf | Generating and Fitting K-Inflated 'discrete gamlss.family' Distributions |
| gamlss.data | GAMLSS Data |
| gamlss.demo | Demos for GAMLSS |
| gamlss.dist | Distributions for Generalized Additive Models for Location Scale and Shape |
| gamlss.inf | Fitting Mixed (Inflated and Adjusted) Distributions |
| gamlss.mx | Fitting Mixture Distributions with GAMLSS |
| gamlss.nl | Fitting non linear parametric GAMLSS models |
| gamlss.spatial | Spatial Terms in Generalized Additive Models for Location Scale and Shape Models |
| gamlss.tr | Generating and Fitting Truncated ‘gamlss.family’ Distributions |
| gamlssbssn | Bimodal Skew Symmetric Normal Distribution |
| gamm4 | Generalized Additive Mixed Models using 'mgcv' and 'lme4' |
| gamm4.test | Comparing Nonlinear Curves and Surface Estimations by Semiparametric Methods |
| gamma | Dose Rate Estimation from in-Situ Gamma-Ray Spectrometry Measurements |
| Gammareg | Classic Gamma Regression: Joint Modeling of Mean and Shape Parameters |
| gammSlice | Generalized Additive Mixed Model Analysis via Slice Sampling |
| gamreg | Robust and Sparse Regression via Gamma-Divergence |
| gamRR | Calculate the RR for the GAM |
| gamsel | Fit Regularization Path for Generalized Additive Models |
| ganalytics | Interact with 'Google Analytics' |
| GANPA | Gene Association Network-Based Pathway Analysis (GANPA) |
| GANPAdata | The GANPA Datasets Package |
| gap | Genetic Analysis Package |
| gap.datasets | Datasets for 'gap' |
| GAparsimony | Searching Parsimony Models with Genetic Algorithms |
| gapfill | Fill Missing Values in Satellite Data |
| gapminder | Data from Gapminder |
| GARCHIto | Class of GARCH-Ito Models |
| garchx | Flexible and Robust GARCH-X Modelling |
| GARCOM | Gene and Region Counting of Mutations ("GARCOM") |
| gargle | Utilities for Working with Google APIs |
| garma | Fitting and Forecasting Gegenbauer ARMA Time Series Models |
| garray | Generalized Array Arithmetic for Ragged Arrays with Named Margins |
| GAS | Generalized Autoregressive Score Models |
| gaselect | Genetic Algorithm (GA) for Variable Selection from High-Dimensional Data |
| gasfluxes | Greenhouse Gas Flux Calculation from Chamber Measurements |
| gasper | Graph Signal Processing |
| gastempt | Analyzing Gastric Emptying from MRI or Scintigraphy |
| gaston | Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models |
| gatepoints | Easily Gate or Select Points on a Scatter Plot |
| gateR | Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation |
| GauPro | Gaussian Process Fitting |
| gauseR | Lotka-Volterra Models for Gause's 'Struggle for Existence' |
| gausscov | The Gaussian Covariate Method for Variable Selection |
| gaussDiff | Difference measures for multivariate Gaussian probability density functions |
| gaussfacts | The Greatest Mathematician Since Antiquity |
| GaussianHMM1d | Inference, Goodness-of-Fit and Forecast for Univariate Gaussian Hidden Markov Models |
| gaussplotR | Fit, Predict and Plot 2D Gaussians |
| gaussquad | Collection of functions for Gaussian quadrature |
| gawdis | Multi-Trait Dissimilarity with more Uniform Contributions |
| gazepath | Parse Eye-Tracking Data into Fixations |
| gb | Generalize Lambda Distribution and Generalized Bootstrapping |
| GB2 | Generalized Beta Distribution of the Second Kind: Properties, Likelihood, Estimation |
| GB2group | Estimation of the Generalised Beta Distribution of the Second Kind from Grouped Data |
| GBcurves | Yield Curves of Brazil, China, and Russia |
| gbeta | Generalized Beta and Beta Prime Distributions |
| gbfs | Interface with Live Bikeshare Data |
| GBJ | Generalized Berk-Jones Test for Set-Based Inference in Genetic Association Studies |
| gbm | Generalized Boosted Regression Models |
| gbm.auto | Automated Boosted Regression Tree Modelling and Mapping Suite |
| gbm2sas | Convert GBM Object Trees to SAS Code |
| gbp | A Bin Packing Problem Solver |
| gbRd | Utilities for processing Rd objects and files |
| gbs2ploidy | Inference of Ploidy from (Genotyping-by-Sequencing) GBS Data |
| gbts | Hyperparameter Search for Gradient Boosted Trees |
| gbutils | Simulation of Real and Complex Numbers and Small Programming Utilities |
| GCAI.bias | Guided Correction Approach for Inherited bias (GCAI.bias) |
| GCalcium | A Data Manipulation and Analysis Package for Calcium Indicator Data |
| GCalignR | Simple Peak Alignment for Gas-Chromatography Data |
| gCat | Graph-based two-sample tests for categorical data |
| gcbd | 'GPU'/CPU Benchmarking in Debian-Based Systems |
| GCD | Global Charcoal Database |
| gcdnet | LASSO and Elastic Net (Adaptive) Penalized Least Squares, Logistic Regression, HHSVM, Squared Hinge SVM and Expectile Regression using a Fast GCD Algorithm |
| gcerisk | Generalized Competing Event Model |
| gcite | Google Citation Parser |
| gcKrig | Analysis of Geostatistical Count Data using Gaussian Copulas |
| gclm | Graphical Continuous Lyapunov Models |
| gclus | Clustering Graphics |
| gcmr | Gaussian Copula Marginal Regression |
| gconcord | Concord method for Graphical Model Selection |
| gconsensus | Consensus Value Constructor |
| gcookbook | Data for "R Graphics Cookbook" |
| GCPM | Generalized Credit Portfolio Model |
| GCSM | Implements Generic Composite Similarity Measure |
| GD | Geographical Detectors for Assessing Spatial Factors |
| GDAdata | Datasets for the Book Graphical Data Analysis with R |
| gdalcubes | Earth Observation Data Cubes from Satellite Image Collections |
| gdalUtilities | Wrappers for 'GDAL' Utilities Executables |
| gdalUtils | Wrappers for the Geospatial Data Abstraction Library (GDAL) Utilities |
| gdata | Various R Programming Tools for Data Manipulation |
| GDAtools | A Toolbox for Geometric Data Analysis and More |
| gde | GBIF Dataset Explorer |
| gDefrag | Graph-Based Landscape De-Fragmentation |
| GDELTtools | Download, slice, and normalize GDELT data |
| gdiff | Graphical Difference Testing |
| GDINA | The Generalized DINA Model Framework |
| gdistance | Distances and Routes on Geographical Grids |
| gdm | Generalized Dissimilarity Modeling |
| gdmp | Genomic Data Management |
| gdns | Tools to Work with Google's 'DNS'-over-'HTTPS' ('DoH') API |
| gdpc | Generalized Dynamic Principal Components |
| gds | Descriptive Statistics of Grouped Data |
| gdtools | Utilities for Graphical Rendering |
| gdxdt | IO for GAMS GDX Files using 'data.table' |
| GE | General Equilibrium Modeling |
| gear | Geostatistical Analysis in R |
| GeDS | Geometrically Designed Spline Regression |
| gee | Generalized Estimation Equation Solver |
| GEEaSPU | Adaptive Association Tests for Multiple Phenotypes using Generalized Estimating Equations (GEE) |
| geeCRT | Bias-Corrected GEE for Cluster Randomized Trials |
| geecure | Marginal Proportional Hazards Mixture Cure Models with Generalized Estimating Equations |
| geeM | Solve Generalized Estimating Equations |
| GEEmediate | Mediation Analysis for Generalized Linear Models Using the Difference Method |
| geepack | Generalized Estimating Equation Package |
| geesmv | Modified Variance Estimators for Generalized Estimating Equations |
| geex | An API for M-Estimation |
| geigen | Calculate Generalized Eigenvalues, the Generalized Schur Decomposition and the Generalized Singular Value Decomposition of a Matrix Pair with Lapack |
| geiger | Analysis of Evolutionary Diversification |
| GEint | Misspecified Models for Gene-Environment Interaction |
| GEInter | Robust Gene-Environment Interaction Analysis |
| gelnet | Generalized Elastic Nets |
| gemlog | File Conversion for 'Gem Infrasound Logger' |
| gemma2 | GEMMA Multivariate Linear Mixed Model |
| gems | Generalized Multistate Simulation Model |
| gemtc | Network Meta-Analysis Using Bayesian Methods |
| gen2stage | Generalized Two-Stage Designs for Phase II Single-Arm Studies |
| gen3sis | General Engine for Eco-Evolutionary Simulations |
| gen5helper | Processing 'Gen5' 2.06 Exported Data |
| genalg | R Based Genetic Algorithm |
| GenAlgo | Classes and Methods to Use Genetic Algorithms for Feature Selection |
| genasis | Global ENvironmental ASsessment Information System (GENASIS) computational tools |
| genBaRcode | Analysis and Visualization Tools for Genetic Barcode Data |
| GenBinomApps | Clopper-Pearson Confidence Interval and Generalized Binomial Distribution |
| gencve | General Cross Validation Engine |
| gendata | Generate and Modify Synthetic Datasets |
| gender | Predict Gender from Names Using Historical Data |
| gendist | Generated Probability Distribution Models |
| GENEAclassify | Segmentation and Classification of Accelerometer Data |
| GENEAread | Package for Reading Binary Files |
| GENEAsphere | Visualisation of Raw or Segmented Accelerometer Data |
| GeneBook | Multi-Types Gene ID Converting/Annotating |
| GeneClusterNet | Gene Expression Clustering and Gene Network |
| GeneCycle | Identification of Periodically Expressed Genes |
| geneExpressionFromGEO | Retrieves Gene Expression Dataset and Gene Symbols from GEO Code |
| GeneF | Package for Generalized F-statistics |
| geneHummus | A Pipeline to Define Gene Families in Legumes and Beyond |
| geneListPie | Profiling a gene list into GOslim or KEGG function pie |
| genemodel | Gene Model Plotting in R |
| GeneNet | Modeling and Inferring Gene Networks |
| geneNetBP | Belief Propagation in Genotype-Phenotype Networks |
| genepi | Genetic Epidemiology Design and Inference |
| genepop | Population Genetic Data Analysis Using Genepop |
| generalCorr | Generalized Correlations and Various Causal Paths |
| generalhoslem | Goodness of Fit Tests for Logistic Regression Models |
| GeneralisedCovarianceMeasure | Test for Conditional Independence Based on the Generalized Covariance Measure (GCM) |
| GeneralizedHyperbolic | The Generalized Hyperbolic Distribution |
| GeneralizedUmatrix | Credible Visualization for Two-Dimensional Projections of Data |
| GeneralOaxaca | Blinder-Oaxaca Decomposition for Generalized Linear Model |
| generator | Generate Data Containing Fake Personally Identifiable Information |
| generics | Common S3 Generics not Provided by Base R Methods Related to Model Fitting |
| genero | Estimate Gender from Names in Spanish and Portuguese |
| geneSignatureFinder | A Gene-signatures finder tools |
| GenEst | Generalized Mortality Estimator |
| genesysr | Genesys PGR Client |
| genetics | Population Genetics |
| GeneticSubsetter | Identify Favorable Subsets of Germplasm Collections |
| GeNetIt | Spatial Graph-Theoretic Genetic Gravity Modelling |
| GenForImp | The Forward Imputation: A Sequential Distance-Based Approach for Imputing Missing Data |
| GenHMM1d | Goodness-of-Fit for Univariate Hidden Markov Models |
| genie | Fast, Robust, and Outlier Resistant Hierarchical Clustering |
| genieclust | The Genie++ Hierarchical Clustering Algorithm with Noise Points Detection |
| genio | Genetics Input/Output Functions |
| genius | Easily Access Song Lyrics from Genius.com |
| geniusr | Tools for Working with the 'Genius' API |
| GenKern | Functions for generating and manipulating binned kernel density estimates |
| genlasso | Path Algorithm for Generalized Lasso Problems |
| GENLIB | Genealogical Data Analysis |
| genlogis | Generalized Logistic Distribution |
| GENMETA | Implements Generalized Meta-Analysis Using Iterated Reweighted Least Squares Algorithm |
| geno2proteo | Finding the DNA and Protein Sequences of Any Genomic or Proteomic Loci |
| genodds | Generalized Odds Ratios |
| genogeographer | Methods for Analysing Forensic Ancestry Informative Markers |
| GenomeAdmixR | Simulate Admixture of Genomes |
| genomeplot | 'Plot genome wide values for all chromosomes' |
| genomic.autocorr | Models Dealing with Spatial Dependency in Genomic Data |
| GenomicMating | Efficient Breeding by Genomic Mating |
| genomicper | Circular Genomic Permutation using Gwas p-Values of Association |
| GenomicTools | Collection of Tools for Genomic Data Analysis |
| GenomicTools.fileHandler | File Handlers for Genomic Data Analysis |
| genoPlotR | Plot Publication-Grade Gene and Genome Maps |
| GenOrd | Simulation of Discrete Random Variables with Given Correlation Matrix and Marginal Distributions |
| GenoScan | A Genome-Wide Scan Statistic Framework for Whole-Genome Sequence Data Analysis |
| genotypeR | SNP Genotype Marker Design and Analysis |
| genpathmox | Generalized Pathmox Approach Segmentation Tree Analysis |
| genpwr | Power Calculations Under Genetic Model Misspecification |
| genridge | Generalized Ridge Trace Plots for Ridge Regression |
| GenSA | Generalized Simulated Annealing |
| genscore | Generalized Score Matching Estimators |
| genset | Generates Data Sets for Class Demonstrations |
| gensphere | Generalized Spherical Distributions |
| genSurv | Generating Multi-State Survival Data |
| gensvm | A Generalized Multiclass Support Vector Machine |
| GenTag | Generate Color Tag Sequences |
| genTS | R Shiny App for Creating Simplified Trial Summary (TS) Domain |
| GenWin | Spline Based Window Boundaries for Genomic Analyses |
| geoBayes | Analysis of Geostatistical Data using Bayes and Empirical Bayes Methods |
| GeoBoxplot | Geographic Box Plot |
| geobr | Loads Shapefiles of Official Spatial Data Sets of Brazil |
| geocacheR | Tools for Geocaching |
| geodaData | Spatial Analysis Datasets for Teaching |
| GeoDE | A geometrical Approach to Differential expression and gene-set enrichment |
| geodetector | Stratified Heterogeneity Measure, Dominant Driving Force Detection, Interaction Relationship Investigation |
| geodimension | Definition of Geographic Dimensions |
| geodist | Fast, Dependency-Free Geodesic Distance Calculations |
| geodiv | Methods for Calculating Gradient Surface Metrics |
| geodrawr | Making Geospatial Objects |
| GeodRegr | Geodesic Regression |
| geoelectrics | 3D-Visualization of Geoelectric Resistivity Measurement Profiles |
| geofabrik | Downloading Open Street Map Data |
| geofacet | 'ggplot2' Faceting Utilities for Geographical Data |
| geofd | Spatial Prediction for Function Value Data |
| geoFKF | Kriging Method for Spatial Functional Data |
| geoGAM | Select Sparse Geoadditive Models for Spatial Prediction |
| geogenr | Geomultistar Generator from American Community Survey (ACS) Geodatabases |
| geogrid | Turn Geospatial Polygons into Regular or Hexagonal Grids |
| geohashTools | Tools for Working with Geohashes |
| geojson | Classes for 'GeoJSON' |
| geojsonio | Convert Data from and to 'GeoJSON' or 'TopoJSON' |
| geojsonlint | Tools for Validating 'GeoJSON' |
| geojsonR | A GeoJson Processing Toolkit |
| geojsonsf | GeoJSON to Simple Feature Converter |
| geoknife | Web-Processing of Large Gridded Datasets |
| GeoLight | Analysis of Light Based Geolocator Data |
| GEOmap | Topographic and Geologic Mapping |
| geomapdata | Data for topographic and Geologic Mapping |
| GeomComb | (Geometric) Forecast Combination Methods |
| geomedb | Functions for Fetching 'GeOMe-db' Data |
| geomerge | Geospatial Data Integration |
| geometa | Tools for Reading and Writing ISO/OGC Geographic Metadata |
| geometr | Generate and Modify Interoperable Geometric Shapes |
| geometries | Convert Between R Objects and Geometric Structures |
| geometry | Mesh Generation and Surface Tessellation |
| geomnet | Network Visualization in the 'ggplot2' Framework |
| GeoMongo | Geospatial Queries Using 'PyMongo' |
| geomorph | Geometric Morphometric Analyses of 2D/3D Landmark Data |
| geomultistar | Multidimensional Queries Enriched with Geographic Data |
| geonames | Interface to the "Geonames" Spatial Query Web Service |
| geonapi | 'GeoNetwork' API R Interface |
| geonetwork | Geographic Networks |
| geophys | Geophysics, Continuum Mechanics, Gravity Modeling |
| geoR | Analysis of Geostatistical Data |
| GeoRange | Calculating Geographic Range from Occurrence Data |
| georob | Robust Geostatistical Analysis of Spatial Data |
| geos | Open Source Geometry Engine ('GEOS') R API |
| geosapi | GeoServer REST API R Interface |
| geoscale | Geological Time Scale Plotting |
| geosed | Smallest Enclosing Disc for Latitude and Longitude Points |
| geospark | Bring Local Sf to Spark |
| geoSpectral | Classes and Methods for Working with Spectral Data with Space-Time Attributes |
| geosphere | Spherical Trigonometry |
| geospt | Geostatistical Analysis and Design of Optimal Spatial Sampling Networks |
| geosptdb | Spatio-Temporal; Inverse Distance Weighting and Radial Basis Functions with Distance-Based Regression |
| geostats | An Introduction to Statistics for Geoscientists |
| geostatsp | Geostatistical Modelling with Likelihood and Bayes |
| GeoTcgaData | Processing various types of data on GEO and TCGA |
| geotech | Geotechnical Engineering |
| geotools | Geo tools |
| geotoolsR | Tools to Improve the Use of Geostatistic |
| geotopbricks | An R Plug-in for the Distributed Hydrological Model GEOtop |
| geoTS | Methods for Handling and Analyzing Time Series of Satellite Images |
| geouy | Geographic Information of Uruguay |
| geoviz | Elevation and GPS Data Visualisation |
| geozoo | Zoo of Geometric Objects |
| gepaf | Google Encoded Polyline Algorithm Format |
| GermaParl | Download and Augment the Corpus of Plenary Protocols of the German Bundestag |
| GerminaR | Indices and Graphics for Assess Seed Germination Process |
| germinationmetrics | Seed Germination Indices and Curve Fitting |
| gert | Simple Git Client for R |
| gesca | Generalized Structured Component Analysis (GSCA) |
| GESE | Gene-Based Segregation Test |
| gesisdata | Reproducible Data Retrieval from the GESIS Data Archive |
| gestalt | Tools for Making and Combining Functions |
| gestate | Generalised Survival Trial Assessment Tool Environment |
| GESTr | Gene Expression State Transformation |
| gesttools | General Purpose G-Estimation for End of Study or Time-Varying Outcomes |
| GET | Global Envelopes |
| getable | Fetching Tabular Data "Onload" in Compiled R Markdown HTML Documents |
| GetBCBData | Imports Datasets from BCB (Central Bank of Brazil) using Its Official API |
| getCRUCLdata | 'CRU' 'CL' v. 2.0 Climatology Client |
| GetDFPData | Reading Annual Financial Reports from Bovespa's DFP, FRE and FCA System |
| getDTeval | Translating Coding Statements using get() and eval() for Improved Run-Time Coding Efficiency |
| gethr | Access to Ethereum-Based Blockchains Through Geth Nodes |
| getlandsat | Get Landsat 8 Data from Amazon Public Data Sets |
| getLattes | Import and Process Data from the 'Lattes' Curriculum Platform |
| GetLattesData | Reading Bibliometric Data from Lattes Platform |
| getMet | Get Meteorological Data for Hydrologic Models |
| getmstatistic | Quantifying Systematic Heterogeneity in Meta-Analysis |
| getopt | C-Like 'getopt' Behavior |
| GetoptLong | Parsing Command-Line Arguments and Simple Variable Interpolation |
| getPass | Masked User Input |
| getProxy | Get Free Proxy IP and Port |
| GetQuandlData | Fast and Cached Import of Data from 'Quandl' Using the 'json API' |
| GetR | GetR: Calculate Guttman error trees in R |
| gets | General-to-Specific (GETS) Modelling and Indicator Saturation Methods |
| getspres | SPRE Statistics for Exploring Heterogeneity in Meta-Analysis |
| GetTDData | Get Data for Brazilian Bonds (Tesouro Direto) |
| gettz | Get the Timezone Information |
| GEVACO | Joint Test of Gene and GxE Interactions via Varying Coefficients |
| GEVcdn | GEV Conditional Density Estimation Network |
| GExMap | A visual, intuitive, easy to use software giving access to a new type of information buried into your microarray data |
| gexp | Generator of Experiments |
| geysertimes | Geyser Data from GeyserTimes.org |
| GFA | Group Factor Analysis |
| gfboost | Gradient-Free Gradient Boosting |
| gfcanalysis | Tools for Working with Hansen et al. Global Forest Change Dataset |
| GFD | Tests for General Factorial Designs |
| GFE | Gross Flows Estimation under Complex Surveys |
| gfer | Green Finance and Environmental Risk |
| GFGM.copula | Generalized Farlie-Gumbel-Morgenstern Copula |
| gfiExtremes | Generalized Fiducial Inference for Extremes |
| gfilinreg | Generalized Fiducial Inference for Low-Dimensional Robust Linear Regression |
| gfilmm | Generalized Fiducial Inference for Normal Linear Mixed Models |
| gfilogisreg | Generalized Fiducial Inference for Binary Logistic Regression Models |
| GFisher | Generalized Fisher's Combination Tests Under Dependence |
| gfiUltra | Generalized Fiducial Inference for Ultrahigh-Dimensional Regression |
| gfmR | Implements Group Fused Multinomial Regression |
| gfonts | Offline 'Google' Fonts for 'Markdown' and 'Shiny' |
| gfoRmula | Parametric G-Formula |
| gfpop | Graph-Constrained Functional Pruning Optimal Partitioning |
| gg.gap | Define Segments in y-Axis for 'ggplot2' |
| ggallin | Grab Bag of 'ggplot2' Functions |
| ggalluvial | Alluvial Plots in 'ggplot2' |
| GGally | Extension to 'ggplot2' |
| ggalt | Extra Coordinate Systems, 'Geoms', Statistical Transformations, Scales and Fonts for 'ggplot2' |
| ggamma | Generalized Gamma Probability Distribution |
| gganimate | A Grammar of Animated Graphics |
| ggasym | Asymmetric Matrix Plotting in 'ggplot2' |
| ggbeeswarm | Categorical Scatter (Violin Point) Plots |
| ggBubbles | Mini Bubble Plots for Comparison of Discrete Data with 'ggplot2' |
| ggbuildr | Save Incremental Builds of Plots |
| ggbump | Bump Chart and Sigmoid Curves |
| ggcharts | Shorten the Distance from Data Visualization Idea to Actual Plot |
| ggChernoff | Chernoff Faces for 'ggplot2' |
| GGClassification | Gabriel Graph Based Large-Margin Classifiers |
| ggconf | Simpler Appearance Modification of 'ggplot2' |
| ggcorrplot | Visualization of a Correlation Matrix using 'ggplot2' |
| ggdag | Analyze and Create Elegant Directed Acyclic Graphs |
| ggdark | Dark Mode for 'ggplot2' Themes |
| ggDCA | Calculate and Plot Decision Curve |
| ggdemetra | 'ggplot2' Extension for Seasonal and Trading Day Adjustment with 'RJDemetra' |
| ggdendro | Create Dendrograms and Tree Diagrams Using 'ggplot2' |
| ggdist | Visualizations of Distributions and Uncertainty |
| ggdmc | Cognitive Models |
| gge | Genotype Plus Genotype-by-Environment Biplots |
| ggeasy | Easy Access to 'ggplot2' Commands |
| GGEBiplotGUI | Interactive GGE Biplots in R |
| GGEBiplots | GGE Biplots with 'ggplot2' |
| ggedit | Interactive 'ggplot2' Layer and Theme Aesthetic Editor |
| ggeffects | Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs |
| ggenealogy | Visualization Tools for Genealogical Data |
| ggetho | Visualisation of High-Throughput Behavioural (i.e. Ethomics) Data |
| ggExtra | Add Marginal Histograms to 'ggplot2', and More 'ggplot2' Enhancements |
| ggfan | Summarise a Distribution Through Coloured Intervals |
| ggfittext | Fit Text Inside a Box in 'ggplot2' |
| ggfocus | Scales that Focus Specific Levels in your ggplot() |
| ggforce | Accelerating 'ggplot2' |
| ggformula | Formula Interface to the Grammar of Graphics |
| ggfortify | Data Visualization Tools for Statistical Analysis Results |
| gggap | Streamlined Creation of Segments on the Y-Axis of 'ggplot2' Plots |
| gggenes | Draw Gene Arrow Maps in 'ggplot2' |
| ggghost | Capture the Spirit of Your 'ggplot2' Calls |
| gggibbous | Moon Charts, a Pie Chart Alternative |
| ggguitar | Utilities for Creating Guitar Tablature |
| ggh4x | Hacks for 'ggplot2' |
| gghalfnorm | Create a Half Normal Plot Using 'ggplot2' |
| gghalves | Compose Half-Half Plots Using Your Favourite Geoms |
| gghighlight | Highlight Lines and Points in 'ggplot2' |
| ggimage | Use Image in 'ggplot2' |
| ggimg | Graphics Layers for Plotting Image Data with 'ggplot2' |
| gginference | Visualise the Results of Inferential Statistics using 'ggplot2' |
| gginnards | Explore the Innards of 'ggplot2' Objects |
| ggip | Data Visualization for IP Addresses and Networks |
| GGIR | Raw Accelerometer Data Analysis |
| ggiraph | Make 'ggplot2' Graphics Interactive |
| ggiraphExtra | Make Interactive 'ggplot2'. Extension to 'ggplot2' and 'ggiraph' |
| ggjoy | Joyplots in 'ggplot2' |
| gglasso | Group Lasso Penalized Learning Using a Unified BMD Algorithm |
| gglm | Grammar of Graphics for Linear Model Diagnostic Plots |
| gglogo | Geom for Logo Sequence Plots |
| ggloop | Create 'ggplot2' Plots in a Loop |
| gglorenz | Plotting Lorenz Curve with the Blessing of 'ggplot2' |
| ggm | Graphical Markov Models with Mixed Graphs |
| ggmap | Spatial Visualization with ggplot2 |
| ggmcmc | Tools for Analyzing MCMC Simulations from Bayesian Inference |
| ggmix | Variable Selection in Linear Mixed Models for SNP Data |
| GGMncv | Gaussian Graphical Models with Nonconvex Regularization |
| ggmosaic | Mosaic Plots in the 'ggplot2' Framework |
| ggmr | Generalized Gauss Markov Regression |
| GGMridge | Gaussian Graphical Models Using Ridge Penalty Followed by Thresholding and Reestimation |
| ggmsa | Plot Multiple Sequence Alignment using 'ggplot2' |
| GGMselect | Gaussian Graphs Models Selection |
| ggmuller | Create Muller Plots of Evolutionary Dynamics |
| ggmulti | High Dimensional Data Visualization |
| ggnetwork | Geometries to Plot Networks with 'ggplot2' |
| ggnewscale | Multiple Fill and Colour Scales in 'ggplot2' |
| ggnormalviolin | A 'ggplot2' Extension to Make Normal Violin Plots |
| ggnuplot | Make 'ggplot2' Look Like 'gnuplot' |
| ggOceanMaps | Plot Data on Oceanographic Maps using 'ggplot2' |
| ggpacman | A 'ggplot2' and 'gganimate' Version of Pac-Man |
| ggpage | Creates Page Layout Visualizations |
| ggparallel | Variations of Parallel Coordinate Plots for Categorical Data |
| ggparliament | Parliament Plots |
| ggparty | 'ggplot' Visualizations for the 'partykit' Package |
| ggperiodic | Easy Plotting of Periodic Data with 'ggplot2' |
| ggplot.multistats | Multiple Summary Statistics for Binned Stats/Geometries |
| ggplot2 | Create Elegant Data Visualisations Using the Grammar of Graphics |
| ggplot2movies | Movies Data |
| ggplotAssist | 'RStudio' Addin for Teaching and Learning 'ggplot2' |
| ggplotgui | Create Ggplots via a Graphical User Interface |
| ggplotify | Convert Plot to 'grob' or 'ggplot' Object |
| ggplotlyExtra | Extra Convenience Functions for 'Plotly' |
| ggpmisc | Miscellaneous Extensions to 'ggplot2' |
| ggPMX | 'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME Models |
| ggpointdensity | A Cross Between a 2D Density Plot and a Scatter Plot |
| ggpol | Visualizing Social Science Data with 'ggplot2' |
| ggpolypath | Polygons with Holes for the Grammar of Graphics |
| ggprism | A 'ggplot2' Extension Inspired by 'GraphPad Prism' |
| ggpubr | 'ggplot2' Based Publication Ready Plots |
| ggpval | Annotate Statistical Tests for 'ggplot2' |
| ggQC | Quality Control Charts for 'ggplot' |
| ggQQunif | Compare Big Datasets to the Uniform Distribution |
| ggquickeda | Quickly Explore Your Data Using 'ggplot2' and 'table1' Summary Tables |
| ggquiver | Quiver Plots for 'ggplot2' |
| ggRandomForests | Visually Exploring Random Forests |
| ggraph | An Implementation of Grammar of Graphics for Graphs and Networks |
| ggraptR | Allows Interactive Visualization of Data Through a Web Browser GUI |
| ggrasp | Gaussian-Based Genome Representative Selector with Prioritization |
| ggrastr | Raster Layers for 'ggplot2' |
| ggrepel | Automatically Position Non-Overlapping Text Labels with 'ggplot2' |
| ggResidpanel | Panels and Interactive Versions of Diagnostic Plots using 'ggplot2' |
| ggridges | Ridgeline Plots in 'ggplot2' |
| ggrisk | Risk Score Plot for Cox Regression |
| ggROC | package for roc curve plot with ggplot2 |
| ggroups | Pedigree and Genetic Groups |
| ggsci | Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2' |
| ggseas | 'stats' for Seasonal Adjustment on the Fly with 'ggplot2' |
| ggseqlogo | A 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos |
| ggshadow | Shadow and Glow Geoms for 'ggplot2' |
| ggsignif | Significance Brackets for 'ggplot2' |
| ggsn | North Symbols and Scale Bars for Maps Created with 'ggplot2' or 'ggmap' |
| ggsoccer | Plot Soccer Event Data |
| ggsolvencyii | A 'ggplot2'-Plot of Composition of Solvency II SCR: SF and IM |
| ggsom | New Data Visualisations for SOMs Networks |
| ggspatial | Spatial Data Framework for ggplot2 |
| ggspectra | Extensions to 'ggplot2' for Radiation Spectra |
| ggstance | Horizontal 'ggplot2' Components |
| ggstar | Star Layer for 'ggplot2' |
| ggstatsplot | 'ggplot2' Based Plots with Statistical Details |
| ggstudent | Continuous Confidence Interval Plots using t-Distribution |
| ggswissmaps | Offers Various Swiss Maps as Data Frames and 'ggplot2' Objects |
| ggtern | An Extension to 'ggplot2', for the Creation of Ternary Diagrams |
| ggtext | Improved Text Rendering Support for 'ggplot2' |
| ggThemeAssist | Add-in to Customize 'ggplot2' Themes |
| ggthemes | Extra Themes, Scales and Geoms for 'ggplot2' |
| ggTimeSeries | Time Series Visualisations Using the Grammar of Graphics |
| GGUM | Generalized Graded Unfolding Model |
| ggupset | Combination Matrix Axis for 'ggplot2' to Create 'UpSet' Plots |
| ggvenn | Draw Venn Diagram by 'ggplot2' |
| ggVennDiagram | A 'ggplot2' Implement of Venn Diagram |
| ggversa | Graficas Versatiles Con 'ggplot2' |
| ggvis | Interactive Grammar of Graphics |
| ggvoronoi | Voronoi Diagrams and Heatmaps with 'ggplot2' |
| ggwordcloud | A Word Cloud Geom for 'ggplot2' |
| ggx | A Natural Language Interface to 'ggplot2' |
| gh | 'GitHub' 'API' |
| GHap | Genome-Wide Haplotyping |
| Ghat | Quantifying Evolution and Selection on Complex Traits |
| ghcm | Functional Conditional Independence Testing with the GHCM |
| ghibli | Studio Ghibli Colour Palettes |
| Ghost | Missing Data Segments Imputation in Multivariate Streams |
| ghql | General Purpose 'GraphQL' Client |
| GHS | Graphical Horseshoe MCMC Sampler Using Data Augmented Block Gibbs Sampler |
| ghyp | Generalized Hyperbolic Distribution and Its Special Cases |
| ghypernet | Fit and Simulate Generalised Hypergeometric Ensembles of Graphs |
| GiANT | Gene Set Uncertainty in Enrichment Analysis |
| gibble | Geometry Decomposition |
| gibbs.met | Naive Gibbs Sampling with Metropolis Steps |
| GibbsACOV | Gibbs Sampler for One-Way Mixed-Effects ANOVA and ANCOVA Models |
| gif | Graphical Independence Filtering |
| Gifi | Multivariate Analysis with Optimal Scaling |
| gifski | Highest Quality GIF Encoder |
| gifti | Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information |
| GIFTr | GIFT Questions Format Generator from Dataframes |
| giftwrap | Take Shell Commands and Turn Them into R Functions |
| GIGrvg | Random Variate Generator for the GIG Distribution |
| GillespieSSA | Gillespie's Stochastic Simulation Algorithm (SSA) |
| GillespieSSA2 | Gillespie's Stochastic Simulation Algorithm for Impatient People |
| gim | Generalized Integration Model |
| gimme | Group Iterative Multiple Model Estimation |
| gimmeTools | Supplemental Tools for the 'gimme' R Package |
| gimms | Download and Process GIMMS NDVI3g Data |
| GiNA | High Throughput Phenotyping |
| GiniDistance | A New Gini Correlation Between Quantitative and Qualitative Variables |
| GiniWegNeg | Computing the Gini-Based Coefficients for Weighted and Negative Attributes |
| GInSARCorW | GACOS InSAR Correction Workflow |
| gIPFrm | Generalized Iterative Proportional Fitting for Relational Models |
| giphyr | R Interface to the Giphy API |
| GiRaF | Gibbs Random Fields Analysis |
| giscoR | Download Map Data from GISCO API - Eurostat |
| GISTools | Some further GIS capabilities for R |
| gistr | Work with 'GitHub' 'Gists' |
| git2r | Provides Access to Git Repositories |
| git2rdata | Store and Retrieve Data.frames in a Git Repository |
| gitcreds | Query 'git' Credentials from 'R' |
| gitear | Client to the 'gitea' API |
| gitgadget | Rstudio Addin for Version Control and Assignment Management using Git |
| githubinstall | A Helpful Way to Install R Packages Hosted on GitHub |
| gitignore | Create Useful .gitignore Files for your Project |
| gitlabr | Access to the Gitlab API |
| gitlink | Add 'Git' Links to Your Web Based Assets |
| givitiR | The GiViTI Calibration Test and Belt |
| gjam | Generalized Joint Attribute Modeling |
| GJRM | Generalised Joint Regression Modelling |
| gk | g-and-k and g-and-h Distribution Functions |
| GK2011 | Gaines and Kuklinski (2011) Estimators for Hybrid Experiments |
| gkgraphR | Accessing the Official 'Google Knowledge Graph' API |
| gkmSVM | Gapped-Kmer Support Vector Machine |
| glacierSMBM | Glacier Surface Mass Balance Model |
| glamlasso | Penalization in Large Scale Generalized Linear Array Models |
| glancedata | Generate tables and plots to get summaries of data |
| glarma | Generalized Linear Autoregressive Moving Average Models |
| glassdoor | Interface to 'Glassdoor' API |
| glasso | Graphical Lasso: Estimation of Gaussian Graphical Models |
| glassoFast | Fast Graphical LASSO |
| glba | General Linear Ballistic Accumulator Models |
| glca | An R Package for Estimating a Group-Effect in Latent Class Analysis |
| glcm | Calculate Textures from Grey-Level Co-Occurrence Matrices (GLCMs) |
| gld | Estimation and Use of the Generalised (Tukey) Lambda Distribution |
| GLDEX | Fitting Single and Mixture of Generalised Lambda Distributions (RS and FMKL) using Various Methods |
| GLDreg | Fit GLD Regression Model and GLD Quantile Regression Model to Empirical Data |
| gldrm | Generalized Linear Density Ratio Models |
| GLIDE | Global and Individual Tests for Direct Effects |
| glinternet | Learning Interactions via Hierarchical Group-Lasso Regularization |
| gllm | Generalised log-Linear Model |
| gllvm | Generalized Linear Latent Variable Models |
| glm.deploy | 'C' and 'Java' Source Code Generator for Fitted Glm Objects |
| glm.predict | Predicted Values and Discrete Changes for GLM |
| glm2 | Fitting Generalized Linear Models |
| GLMaSPU | An Adaptive Test on High Dimensional Parameters in Generalized Linear Models |
| glmbb | All Hierarchical or Graphical Models for Generalized Linear Model |
| glmc | Fitting Generalized Linear Models Subject to Constraints |
| GLMcat | Generalized Linear Models for Categorical Responses |
| glmdisc | Discretization and Grouping for Logistic Regression |
| glmdm | R Code for Simulation of GLMDM |
| glme | Generalized Linear Mixed Effects Models |
| glmertree | Generalized Linear Mixed Model Trees |
| glmglrt | GLRT P-Values in Generalized Linear Models |
| glmgraph | Graph-Constrained Regularization for Sparse Generalized Linear Models |
| glmlep | Fit GLM with LEP-Based Penalized Maximum Likelihood |
| glmm | Generalized Linear Mixed Models via Monte Carlo Likelihood Approximation |
| GLMMadaptive | Generalized Linear Mixed Models using Adaptive Gaussian Quadrature |
| glmmboot | Bootstrap Resampling for Mixed Effects and Plain Models |
| glmmEP | Generalized Linear Mixed Model Analysis via Expectation Propagation |
| glmmfields | Generalized Linear Mixed Models with Robust Random Fields for Spatiotemporal Modeling |
| glmmLasso | Variable Selection for Generalized Linear Mixed Models by L1-Penalized Estimation |
| glmmML | Generalized Linear Models with Clustering |
| GLMMRR | Generalized Linear Mixed Model (GLMM) for Binary Randomized Response Data |
| glmmsr | Fit a Generalized Linear Mixed Model |
| glmmTMB | Generalized Linear Mixed Models using Template Model Builder |
| glmnet | Lasso and Elastic-Net Regularized Generalized Linear Models |
| glmnetcr | Fit a Penalized Constrained Continuation Ratio Model for Predicting an Ordinal Response |
| glmnetUtils | Utilities for 'Glmnet' |
| GLMpack | Data and Code to Accompany Generalized Linear Models, 2nd Edition |
| glmpath | L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model |
| glmpathcr | Fit a Penalized Continuation Ratio Model for Predicting an Ordinal Response |
| glmpca | Dimension Reduction of Non-Normally Distributed Data |
| GLMsData | Generalized Linear Model Data Sets |
| GlmSimulatoR | Creates Ideal Data for Generalized Linear Models |
| glmtlp | Truncated Lasso Regularized Generalized Linear Models |
| glmtree | Logistic Regression Trees |
| glmulti | Model Selection and Multimodel Inference Made Easy |
| glmvsd | Variable Selection Deviation Measures and Instability Tests for High-Dimensional Generalized Linear Models |
| glmx | Generalized Linear Models Extended |
| GlobalDeviance | Global Deviance Permutation Tests |
| GlobalFit | Bi-Level Optimization of Metabolic Network Models |
| globalGSA | Global Gene-Set Analysis for Association Studies |
| globalKinhom | Inhomogeneous K- And Pair Correlation Functions Using Global Estimators |
| GlobalOptions | Generate Functions to Get or Set Global Options |
| globalOptTests | Objective functions for benchmarking the performance of global optimization algorithms |
| globals | Identify Global Objects in R Expressions |
| globe | Plot 2D and 3D Views of the Earth, Including Major Coastline |
| glogis | Fitting and Testing Generalized Logistic Distributions |
| glow | Make Plots that Glow |
| glpkAPI | R Interface to C API of GLPK |
| glrt | Generalized Logrank Tests for Interval-censored Failure Time Data |
| gLRTH | Genome-Wide Association and Linkage Analysis under Heterogeneity |
| GLSME | Generalized Least Squares with Measurement Error |
| glue | Interpreted String Literals |
| gluedown | Wrap Vectors in Markdown Formatting |
| gluvarpro | Glucose Variability Measures from Continuous Glucose Monitoring Data |
| glvmfit | Methods to Assess Generalized Latent Variable Model Fit |
| gma | Granger Mediation Analysis |
| GMAC | Genomic Mediation Analysis with Adaptive Confounding Adjustment |
| gmailr | Access the 'Gmail' 'RESTful' API |
| GmAMisc | 'Gianmarco Alberti' Miscellaneous |
| gmapsdistance | Distance and Travel Time Between Two Points from Google Maps |
| gmat | Simulation of Graphical Correlation Matrices |
| GMCM | Fast Estimation of Gaussian Mixture Copula Models |
| gMCP | Graph Based Multiple Comparison Procedures |
| gmDatabase | Accessing a Geometallurgical Database with R |
| GMDH | Short Term Forecasting via GMDH-Type Neural Network Algorithms |
| GMDH2 | Binary Classification via GMDH-Type Neural Network Algorithms |
| GMDHreg | Regression using GMDH Algorithms |
| Gmedian | Geometric Median, k-Median Clustering and Robust Median PCA |
| gmfd | Inference and Clustering of Functional Data |
| gmGeostats | Geostatistics for Compositional Analysis |
| gmgm | Gaussian Mixture Graphical Model Learning and Inference |
| Gmisc | Descriptive Statistics, Transition Plots, and More |
| GMKMcharlie | Unsupervised Gaussian Mixture and Minkowski and Spherical K-Means with Constraints |
| gmm | Generalized Method of Moments and Generalized Empirical Likelihood |
| GMMAT | Generalized Linear Mixed Model Association Tests |
| GMMBoost | Likelihood-Based Boosting for Generalized Mixed Models |
| gmnl | Multinomial Logit Models with Random Parameters |
| gmodels | Various R Programming Tools for Model Fitting |
| gMOIP | Tools for 2D and 3D Plots of Single and Multi-Objective Linear/Integer Programming Models |
| gmp | Multiple Precision Arithmetic |
| GMPro | Graph Matching with Degree Profiles |
| gms | 'GAMS' Modularization Support Package |
| GMSE | Generalised Management Strategy Evaluation Simulator |
| GMSimpute | Generalized Mass Spectrum Missing Peaks Abundance Imputation |
| gmt | Interface Between GMT Map-Making Software and R |
| gmvarkit | Estimate Gaussian Mixture Vector Autoregressive Model |
| gMWT | Generalized Mann-Whitney Type Tests |
| GMZTests | Statistical Tests |
| GNAR | Methods for Fitting Network Time Series Models |
| GNE | Computation of Generalized Nash Equilibria |
| gnFit | Goodness of Fit Test for Continuous Distribution Functions |
| gnlm | Generalized Nonlinear Regression Models |
| gnm | Generalized Nonlinear Models |
| gnn | Generative Neural Networks |
| gnomonicM | Estimate Natural Mortality for Different Life Stages |
| gnorm | Generalized Normal/Exponential Power Distribution |
| GNRS | Access the 'Geographic Name Resolution Service' |
| GNSSseg | Homogenization of GNSS Series |
| gnumeric | Read Data from Files Readable by 'gnumeric' |
| gofastr | Fast DocumentTermMatrix and TermDocumentMatrix Creation |
| gofCopula | Goodness-of-Fit Tests for Copulae |
| goffda | Goodness-of-Fit Tests for Functional Data |
| gofgamma | Goodness-of-Fit Tests for the Gamma Distribution |
| GoFKernel | Testing Goodness-of-Fit with the Kernel Density Estimator |
| GofKmt | Khmaladze Martingale Transformation Goodness-of-Fit Test |
| GOFShiny | Interactive Document for Working with Goodness of Fit Analysis |
| goft | Tests of Fit for some Probability Distributions |
| goftest | Classical Goodness-of-Fit Tests for Univariate Distributions |
| GOGANPA | GO-Functional-Network-based Gene-Set-Analysis |
| gogarch | Generalized Orthogonal GARCH (GO-GARCH) models |
| goldi | Gene Ontology Label Discernment and Identification |
| golem | A Framework for Robust Shiny Applications |
| gomms | GLM-Based Ordination Method |
| GomoGomonoMi | Animate Text using the 'Animate.css' Library |
| gontr | Dataset for 'GOxploreR' |
| GoodmanKruskal | Association Analysis for Categorical Variables |
| goodpractice | Advice on R Package Building |
| googleAnalyticsR | Google Analytics API into R |
| googleAuthR | Authenticate and Create Google APIs |
| googleCloudRunner | R Scripts in the Google Cloud via Cloud Run, Cloud Build and Cloud Scheduler |
| googleCloudStorageR | Interface with Google Cloud Storage API |
| googleCloudVisionR | Access to the 'Google Cloud Vision' API for Image Recognition, OCR and Labeling |
| googleComputeEngineR | R Interface with Google Compute Engine |
| googledrive | An Interface to Google Drive |
| googleformr | Collect Data Programmatically by POST Methods to Google Forms |
| GoogleKnowledgeGraphR | Retrieve Information from 'Google Knowledge Graph' API |
| googleLanguageR | Call Google's 'Natural Language' API, 'Cloud Translation' API, 'Cloud Speech' API and 'Cloud Text-to-Speech' API |
| googlenlp | An Interface to Google's Cloud Natural Language API |
| googlePolylines | Encoding Coordinates into 'Google' Polylines |
| googlePrintr | Connect to 'Google Cloud Print' API |
| googlePublicData | Working with Google's 'Public Data Explorer' DSPL Metadata Files |
| googler | Google from the R Console |
| googlesheets | Manage Google Spreadsheets from R |
| googlesheets4 | Access Google Sheets using the Sheets API V4 |
| googleTagManageR | Access the 'Google Tag Manager' API using R |
| googleVis | R Interface to Google Charts |
| googleway | Accesses Google Maps APIs to Retrieve Data and Plot Maps |
| GOplot | Visualization of Functional Analysis Data |
| GORCure | Fit Generalized Odds Rate Mixture Cure Model with Interval Censored Data |
| goric | Generalized Order-Restricted Information Criterion |
| gorica | Evaluation of Inequality Constrained Hypotheses Using GORICA |
| gotop | Scroll Back to Top Icon in 'rmarkdown' and 'shiny' |
| govdown | GOV.UK Style Templates for R Markdown |
| govStatJPN | functions to get public survey data in Japan |
| gower | Gower's Distance |
| GOxploreR | Structural Exploration of the Gene Ontology (GO) Knowledge Base |
| goxygen | In-Code Documentation for 'GAMS' |
| gpairs | The Generalized Pairs Plot |
| GPareto | Gaussian Processes for Pareto Front Estimation and Optimization |
| GPArotation | GPA Factor Rotation |
| gpboost | Combining Tree-Boosting with Gaussian Process and Mixed Effects Models |
| gpbStat | Comprehensive Statistical Analysis of Plant Breeding Experiments |
| gpclib | General Polygon Clipping Library for R |
| GPCMlasso | Differential Item Functioning in Generalized Partial Credit Models |
| gPdtest | Bootstrap goodness-of-fit test for the generalized Pareto distribution |
| GPFDA | Gaussian Process for Functional Data Analysis |
| GPfit | Gaussian Processes Modeling |
| gpg | GNU Privacy Guard for R |
| GpGp | Fast Gaussian Process Computation Using Vecchia's Approximation |
| gpindex | Generalized Price and Quantity Indexes |
| gpk | 100 Data Sets for Statistics Education |
| GPL2025 | Convert Chip ID of the GPL2015 into GeneBank Accession and ENTREZID |
| gplite | Lightweight Implementation for the Most Common Gaussian Process Models |
| gplm | Generalized Partial Linear Models (GPLM) |
| gplots | Various R Programming Tools for Plotting Data |
| GPLTR | Generalized Partially Linear Tree-Based Regression Model |
| GPM | Gaussian Process Modeling of Multi-Response and Possibly Noisy Datasets |
| gpmap | Analysing and Plotting Genotype-Phenotype Maps |
| GPoM | Generalized Polynomial Modelling |
| GPoM.FDLyapu | Lyapunov Exponents and Kaplan-Yorke Dimension |
| GPP | Gaussian Process Projection |
| gppm | Gaussian Process Panel Modeling |
| GPrank | Gaussian Process Ranking of Multiple Time Series |
| GPRMortality | Gaussian Process Regression for Mortality Rates |
| gProfileR | Interface to the 'g:Profiler' Toolkit |
| gprofiler2 | Interface to the 'g:Profiler' Toolset |
| GPSCDF | Generalized Propensity Score Cumulative Distribution Function |
| GPSeqClus | Sequential Clustering Algorithm for Location Data |
| gptk | Gaussian Processes Tool-Kit |
| GPvam | Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling |
| GPvecchia | Scalable Gaussian-Process Approximations |
| gqlr | 'GraphQL' Server in R |
| gquad | Prediction of G Quadruplexes and Other Non-B DNA Motifs |
| grabsampling | Probability of Detection for Grab Sample Selection |
| Grace | Graph-Constrained Estimation and Hypothesis Tests |
| gradDescent | Gradient Descent for Regression Tasks |
| grade | Binary Grading functions for R |
| gradeR | Helps Grade Assignment Submissions that are R Scripts |
| gradientPickerD3 | Interactive Color Gradient Picker Using 'htmlwidgets' and the Modified JS Script 'jquery-gradient-picker' |
| gRain | Graphical Independence Networks |
| grainchanger | Moving-Window and Direct Data Aggregation |
| grainscape | Landscape Connectivity, Habitat, and Protected Area Networks |
| gramEvol | Grammatical Evolution for R |
| GRANBase | Creating Continuously Integrated Package Repositories from Manifests |
| GRANCore | Classes and Methods for 'GRANBase' |
| grangers | Inference on Granger-Causality in the Frequency Domain |
| granova | Graphical Analysis of Variance |
| granovaGG | Graphical Analysis of Variance Using ggplot2 |
| GRAPE | Gene-Ranking Analysis of Pathway Expression |
| grapes | Make Binary Operators |
| gRapfa | Acyclic Probabilistic Finite Automata |
| graph3d | A Wrapper of the JavaScript Library 'vis-graph3d' |
| graph4lg | Build Graphs for Landscape Genetics Analysis |
| GrapheR | A Multi-Platform GUI for Drawing Customizable Graphs in R |
| grapherator | A Modular Multi-Step Graph Generator |
| graphframes | Interface for 'GraphFrames' |
| graphhopper | An R Interface to the 'GraphHopper' Directions API |
| graphicalExtremes | Statistical Methodology for Graphical Extreme Value Models |
| graphicalVAR | Graphical VAR for Experience Sampling Data |
| graphkernels | Graph Kernels |
| graphlayouts | Additional Layout Algorithms for Network Visualizations |
| graphon | A Collection of Graphon Estimation Methods |
| GraphPCA | Graphical Tools of Histogram PCA |
| graphql | A GraphQL Query Parser |
| graphscan | Cluster Detection with Hypothesis Free Scan Statistic |
| graphsim | Simulate Expression Data from 'igraph' Networks |
| graphTweets | Visualise Twitter Interactions |
| GrassmannOptim | Grassmann Manifold Optimization |
| gratia | Graceful 'ggplot'-Based Graphics and Other Functions for GAMs Fitted Using 'mgcv' |
| graticule | Meridional and Parallel Lines for Maps |
| gratis | Generating Time Series with Diverse and Controllable Characteristics |
| grattan | Australian Tax Policy Analysis |
| gravitas | Explore Probability Distributions for Bivariate Temporal Granularities |
| gravity | Estimation Methods for Gravity Models |
| gRbase | A Package for Graphical Modelling in R |
| gRc | Inference in Graphical Gaussian Models with Edge and Vertex Symmetries |
| GRCdata | Parameter Inference and Optimal Designs for Grouped and/or Right-Censored Count Data |
| grec | Gradient-Based Recognition of Spatial Patterns in Environmental Data |
| GreedyExperimentalDesign | Greedy Experimental Design Construction |
| GreedyExperimentalDesignJARs | GreedyExperimentalDesign JARs |
| greekLetters | Routines for Writing Greek Letters and Mathematical Symbols on the 'RStudio' and 'RGui' |
| greenclust | Combine Categories Using Greenacre's Method |
| Greg | Regression Helper Functions |
| gremlin | Mixed-Effects REML Incorporating Generalized Inverses |
| GREMLINS | Generalized Multipartite Networks |
| gren | Adaptive Group-Regularized Logistic Elastic Net Regression |
| greport | Graphical Reporting for Clinical Trials |
| greta | Simple and Scalable Statistical Modelling in R |
| gretel | Generalized Path Analysis for Social Networks |
| gretlR | Knit-Engine for 'Gretl' |
| grex | Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data |
| greybox | Toolbox for Model Building and Forecasting |
| greyzoneSurv | Fit a Grey-Zone Model with Survival Data |
| grf | Generalized Random Forests |
| gridBase | Integration of base and grid graphics |
| gridBezier | Bezier Curves in 'grid' |
| gridDebug | Debugging 'grid' Graphics |
| gridExtra | Miscellaneous Functions for "Grid" Graphics |
| gridGeometry | Polygon Geometry in 'grid' |
| gridGraphics | Redraw Base Graphics Using 'grid' Graphics |
| gridGraphviz | Drawing Graphs with 'grid' |
| GridOnClusters | Cluster-Preserving Multivariate Joint Grid Discretization |
| gridsampler | A Simulation Tool to Determine the Required Sample Size for Repertory Grid Studies |
| gridSVG | Export 'grid' Graphics as SVG |
| gridtext | Improved Text Rendering Support for 'Grid' Graphics |
| gRim | Graphical Interaction Models |
| grImport | Importing Vector Graphics |
| grImport2 | Importing 'SVG' Graphics |
| GrimR | Calculate Optical Parameters from Spindle Stage Measurements |
| gripp | General Inverse Problem Platform |
| grizbayr | Bayesian Inference for A|B and Bandit Marketing Tests |
| grmsem | Genetic-Relationship-Matrix Structural Equation Modelling (GRMSEM) |
| grnn | General regression neural network |
| GROAN | Genomic Regression Workbench |
| grobblR | Creating Flexible, Reproducible 'PDF' Reports |
| groc | Generalized Regression on Orthogonal Components |
| gromovlab | Gromov-Hausdorff Type Distances for Labeled Metric Spaces |
| groundhog | Reproducible Scripts via Version-Specific Package Loading |
| GroupBN | Learn Group Bayesian Networks using Hierarchical Clustering |
| GroupComparisons | Paired/Unpaired Parametric/Non-Parametric Group Comparisons |
| groupdata2 | Creating Groups from Data |
| grouped | Regression Analysis of Grouped and Coarse Data |
| groupedstats | Grouped Statistical Analyses in a Tidy Way |
| groupedSurv | Efficient Estimation of Grouped Survival Models |
| groupICA | Independent Component Analysis for Grouped Data |
| groupr | Groups with Inapplicable Values |
| groupRemMap | Regularized Multivariate Regression for Identifying Master Predictors Using the GroupRemMap Penalty |
| GroupSeq | A GUI-Based Program to Compute Probabilities Regarding Group Sequential Designs |
| groupsubsetselection | Group Subset Selection |
| GroupTest | Multiple Testing Procedure for Grouped Hypotheses |
| groupWQS | Grouped Weighted Quantile Sum Regression |
| grove | Wavelet Functional ANOVA Through Markov Groves |
| growfunctions | Bayesian Non-Parametric Dependent Models for Time-Indexed Functional Data |
| growth | Multivariate Normal and Elliptically-Contoured Repeated Measurements Models |
| growthcurver | Simple Metrics to Summarize Growth Curves |
| growthmodels | Nonlinear Growth Models |
| growthPheno | Plotting, Smoothing and Growth Trait Extraction for Longitudinal Data |
| growthrate | Bayesian reconstruction of growth velocity |
| growthrates | Estimate Growth Rates from Experimental Data |
| grpCox | Penalized Cox Model for High-Dimensional Data with Grouped Predictors |
| grplasso | Fitting User-Specified Models with Group Lasso Penalty |
| grplassocat | Standardization for Group Lasso Models with Categorical Predictors |
| grpreg | Regularization Paths for Regression Models with Grouped Covariates |
| grpSLOPE | Group Sorted L1 Penalized Estimation |
| GrpString | Patterns and Statistical Differences Between Two Groups of Strings |
| GRPtests | Goodness-of-Fit Tests in High-Dimensional GLMs |
| grr | Alternative Implementations of Base R Functions |
| GRS.test | GRS Test for Portfolio Efficiency, Its Statistical Power Analysis, and Optimal Significance Level Calculation |
| grt | General Recognition Theory |
| GRTo | Tools for the Analysis of Gutenberg-Richter Distributions of Earthquake Magnitudes |
| GSA | Gene Set Analysis |
| GSA.UN | Global Sensitivity Analysis Tool |
| GSAfisherCombined | Gene Set Analysis with Fisher Combined Method |
| GSAgm | Gene Set Analysis using the Gamma Method |
| gsalib | Utility Functions For GATK |
| GSAQ | Gene Set Analysis with QTL |
| gsarima | Two Functions for Generalized SARIMA Time Series Simulation |
| gsbDesign | Group Sequential Bayes Design |
| gsbm | Estimate Parameters in the Generalized SBM |
| gscaLCA | Generalized Structure Component Analysis- Latent Class Analysis & Latent Class Regression |
| gscounts | Group Sequential Designs with Negative Binomial Outcomes |
| GSDA | Gene Set Distance Analysis (GSDA) |
| gsDesign | Group Sequential Design |
| GSE | Robust Estimation in the Presence of Cellwise and Casewise Contamination and Missing Data |
| gsEasy | Gene Set Enrichment Analysis in R |
| GSED | Group Sequential Enrichment Design |
| gSeg | Graph-Based Change-Point Detection (g-Segmentation) |
| GSelection | Genomic Selection |
| gSEM | Semi-Supervised Generalized Structural Equation Modeling |
| gset | Group Sequential Design in Equivalence Studies |
| gsheet | Download Google Sheets Using Just the URL |
| GSIF | Global Soil Information Facilities |
| gsisdecoder | High Efficient Functions to Decode NFL Player IDs |
| gsl | Wrapper for the Gnu Scientific Library |
| gsloid | Global Sea Level and Oxygen Isotope Data |
| GSM | Gamma Shape Mixture |
| gsmoothr | Smoothing tools |
| GSMX | Multivariate Genomic Selection |
| GSODR | Global Surface Summary of the Day ('GSOD') Weather Data Client |
| GSparO | Group Sparse Optimization |
| gsrsb | Group Sequential Refined Secondary Boundary |
| gss | General Smoothing Splines |
| GSSE | Genotype-Specific Survival Estimation |
| gstar | Generalized Space-Time Autoregressive Model |
| gstat | Spatial and Spatio-Temporal Geostatistical Modelling, Prediction and Simulation |
| gStream | Graph-Based Sequential Change-Point Detection for Streaming Data |
| gsubfn | Utilities for Strings and Function Arguments |
| gsw | Gibbs Sea Water Functions |
| GsymPoint | Estimation of the Generalized Symmetry Point, an Optimal Cutpoint in Continuous Diagnostic Tests |
| gsynth | Generalized Synthetic Control Method |
| gt | Easily Create Presentation-Ready Display Tables |
| gt4ireval | Generalizability Theory for Information Retrieval Evaluation |
| gtable | Arrange 'Grobs' in Tables |
| gtcorr | Calculate efficiencies of group testing algorithms with correlated responses |
| gte | Generalized Turnbull's Estimator |
| gTests | Graph-Based Two-Sample Tests |
| gtfs2gps | Converting Transport Data from GTFS Format to GPS-Like Records |
| gtfsrouter | Routing with GTFS (General Transit Feed Specification) Data |
| gtfstools | General Transit Feed Specification (GTFS) Editing and Analysing Tools |
| gtheory | Apply Generalizability Theory with R |
| gtools | Various R Programming Tools |
| gtop | Game-Theoretically OPtimal (GTOP) Reconciliation Method |
| gtrendsR | Perform and Display Google Trends Queries |
| gtsummary | Presentation-Ready Data Summary and Analytic Result Tables |
| gtWAS | Genome and Transcriptome Wide Association Study |
| guaguas | Nombres Inscritos en Chile (1920 - 2019) |
| guardianapi | Access 'The Guardian' Newspaper Open Data API |
| Guerry | Maps, Data and Methods Related to Guerry (1833) "Moral Statistics of France" |
| guess | Adjust Estimates of Learning for Guessing |
| GuessCompx | Empirically Estimates Algorithm Complexity |
| guf | Generally Useful Functions |
| GUIDE | GUI for DErivatives in R |
| GUILDS | Implementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure |
| guiplot | User-Friendly GUI Plotting Tools |
| GUIProfiler | Graphical User Interface for Rprof() |
| gumbel | The Gumbel-Hougaard Copula |
| GUniFrac | Generalized UniFrac Distances |
| gunit | Converts Conductance Units |
| gunsales | Statistical Analysis of Monthly Background Checks of Gun Purchases |
| gustave | A User-Oriented Statistical Toolkit for Analytical Variance Estimation |
| gutenbergr | Download and Process Public Domain Works from Project Gutenberg |
| GUTS | Fast Calculation of the Likelihood of a Stochastic Survival Model |
| GVARX | Perform Global Vector Autoregression Estimation and Inference |
| gvc | Global Value Chains Tools |
| gvcm.cat | Regularized Categorical Effects/Categorical Effect Modifiers/Continuous/Smooth Effects in GLMs |
| gvcR | Genotypic Variance Components |
| gvlma | Global Validation of Linear Models Assumptions |
| gwaRs | Manhattan, Q-Q, and PCA Plots using 'ggplot2' |
| GWASbyCluster | Identifying Significant SNPs in Genome Wide Association Studies (GWAS) via Clustering |
| GWASExactHW | Exact Hardy-Weinburg testing for Genome Wide Association Studies |
| gwasforest | Make Forest Plot with GWAS Data |
| GWASinlps | Nonlocal Prior Based Iterative SNP Selection Tool for Genome-Wide Association Studies |
| GWASinspector | Comprehensive and Easy to Use Quality Control of GWAS Results |
| gwdegree | A Shiny App to Aid Interpretation of Geometrically-Weighted Degree Estimates in Exponential Random Graph Models |
| gwer | Geographically Weighted Elliptical Regression |
| gwerAM | Controlling the genome-wide type I error rate in association mapping experiments |
| GWEX | Multi-Site Stochastic Models for Daily Precipitation and Temperature |
| gwfa | Geographically Weighted Fractal Analysis |
| GWG | Calculation of probabilities for inadequate and excessive gestational weight gain |
| GWI | Count and Continuous Generalized Variability Indexes |
| gWidgets2 | Rewrite of gWidgets API for Simplified GUI Construction |
| gWidgets2RGtk2 | Implementation of gWidgets2 for the RGtk2 Package |
| gWidgets2tcltk | Toolkit Implementation of gWidgets2 for tcltk |
| GWLelast | Geographically Weighted Logistic Elastic Net Regression |
| GWmodel | Geographically-Weighted Models |
| GWnnegPCA | Geographically Weighted Non-Negative Principal Components Analysis |
| GWpcor | Geographically Weighted Partial Correlation Coefficient |
| gWQS | Generalized Weighted Quantile Sum Regression |
| GWRM | Generalized Waring Regression Model for Count Data |
| gwrpvr | Genome-Wide Regression P-Value (Gwrpv) |
| gwrr | Fits geographically weighted regression models with diagnostic tools |
| GWSDAT | GroundWater Spatiotemporal Data Analysis Tool (GWSDAT) |
| gwsem | Genome-Wide Structural Equation Modeling |
| GWsignif | Estimating Genome-Wide Significance for Whole Genome Sequencing Studies, Either Single SNP Tests or Region-Based Tests |
| GxEScanR | Run GWAS/GWEIS Scans Using Binary Dosage Files |
| GxM | Maximum Likelihood Estimation for Gene-by-Measured Environment Interaction Models |
| gym | Provides Access to the OpenAI Gym API |
| h2o | R Interface for the 'H2O' Scalable Machine Learning Platform |
| h2o4gpu | Interface to 'H2O4GPU' |
| H2x2Factorial | Sample Size Calculation in Hierarchical 2x2 Factorial Trials |
| haarfisz | Software to perform Haar Fisz transforms |
| hablar | Non-Astonishing Results in R |
| HAC | Estimation, Simulation and Visualization of Hierarchical Archimedean Copulae (HAC) |
| hackeRnews | Wrapper for the 'Official Hacker News' API |
| hacksaw | Additional Tools for Splitting and Cleaning Data |
| HACSim | Iterative Extrapolation of Species' Haplotype Accumulation Curves for Genetic Diversity Assessment |
| HadamardR | Hadamard Matrix Generation |
| HaDeX | Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data |
| HadoopStreaming | Utilities for using R scripts in Hadoop streaming |
| hadron | Analysis Framework for Monte Carlo Simulation Data in Physics |
| hagis | Analysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity |
| hail | Read HYDRA Rainfall Data |
| hal9001 | The Scalable Highly Adaptive Lasso |
| haldensify | Highly Adaptive Lasso Conditional Density Estimation |
| halfcircle | Plot Halfcircle Diagram |
| hamlet | Hierarchical Optimal Matching and Machine Learning Toolbox |
| handlr | Convert Among Citation Formats |
| HandTill2001 | Multiple Class Area under ROC Curve |
| handyplots | Handy Plots |
| hans | Haversines are not Slow |
| hansard | Provides Easy Downloading Capabilities for the UK Parliament API |
| hapassoc | Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm |
| Hapi | Inference of Chromosome-Length Haplotypes Using Genomic Data of Single Gamete Cells |
| HAPim | HapIM |
| Haplin | Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes |
| haplo.stats | Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous |
| haploR | Query 'HaploReg', 'RegulomeDB' |
| haploReconstruct | Reconstruction of Haplotype-Blocks from Time Series Data |
| HaploSim | Functions to simulate haplotypes |
| haplotyper | Tool for Clustering Genotypes in Haplotypes |
| haplotypes | Manipulating DNA Sequences and Estimating Unambiguous Haplotype Network with Statistical Parsimony |
| happybiRthday | Calculate Upcoming Birthday Dates of Github Repos |
| happytime | Two Games to Relieve the Boredom |
| hapsim | Haplotype Data Simulation |
| hardhat | Construct Modeling Packages |
| HardyWeinberg | Statistical Tests and Graphics for Hardy-Weinberg Equilibrium |
| HARModel | Heterogeneous Autoregressive Models |
| harmonicmeanp | Harmonic Mean p-Values and Model Averaging by Mean Maximum Likelihood |
| HarmonicRegression | Harmonic Regression to One or more Time Series |
| harrietr | Wrangle Phylogenetic Distance Matrices and Other Utilities |
| harrypotter | Palettes Generated from All "Harry Potter" Movies |
| HARtools | Read HTTP Archive ('HAR') Data |
| Harvest.Tree | Harvest the Classification Tree |
| hash | Full Feature Implementation of Hash/Associated Arrays/Dictionaries |
| hashids | Generate Short Unique YouTube-Like IDs (Hashes) from Integers |
| hashr | Hash R Objects to Integers Fast |
| hasseDiagram | Drawing Hasse Diagram |
| haven | Import and Export 'SPSS', 'Stata' and 'SAS' Files |
| hawkes | Hawkes process simulation and calibration toolkit |
| hazer | Identifying Foggy and Cloudy Images by Quantifying Haziness |
| hazus | Damage functions from FEMA's HAZUS software for use in modeling financial losses from natural disasters |
| hBayesDM | Hierarchical Bayesian Modeling of Decision-Making Tasks |
| hbbr | Hierarchical Bayesian Benefit-Risk Assessment Using Discrete Choice Experiment |
| HBglm | Hierarchical Bayesian Regression for GLMs |
| hbim | Hill/Bliss Independence Model for Combination Vaccines |
| hbm | Hierarchical Block Matrix Analysis |
| hbmem | Hierarchical Bayesian Analysis of Recognition Memory |
| hbsae | Hierarchical Bayesian Small Area Estimation |
| HBSTM | Hierarchical Bayesian Space-Time models for Gaussian space-time data |
| HBV.IANIGLA | Modular Hydrological Model |
| hcandersenr | H.C. Andersens Fairy Tales |
| hcc | Hidden correlation check |
| hcci | Interval estimation for the parameters of linear models with heteroskedasticity (Wild Bootstrap) |
| HCD | Hierarchical Community Detection by Recursive Partitioning |
| hchinamap | Mapping China and Its Provinces |
| HCmodelSets | Regression with a Large Number of Potential Explanatory Variables |
| hcp | Change Point Estimation for Regression with Heteroscedastic Data |
| HCR | Causal Discovery from Discrete Data using Hidden Compact Representation |
| HCT | Calculates Significance Criteria and Power for a Single Arm Trial |
| HCTR | Higher Criticism Tuned Regression |
| hctrial | Using Historical Controls for Designing Phase II Clinical Trials |
| hda | Heteroscedastic Discriminant Analysis |
| hdbinseg | Change-Point Analysis of High-Dimensional Time Series via Binary Segmentation |
| hdbm | High Dimensional Bayesian Mediation Analysis |
| HDCI | High Dimensional Confidence Interval Based on Lasso and Bootstrap |
| HDclassif | High Dimensional Supervised Classification and Clustering |
| HDclust | Clustering High Dimensional Data with Hidden Markov Model on Variable Blocks |
| HDcpDetect | Detect Change Points in Means of High Dimensional Data |
| HDCurves | Hierarchical Derivative Curve Estimation |
| hdd | Easy Manipulation of Out of Memory Data Sets |
| HDDesign | Sample Size Calculation for High Dimensional Classification Study |
| hddplot | Use Known Groups in High-Dimensional Data to Derive Scores for Plots |
| hddtools | Hydrological Data Discovery Tools |
| hdf5r | Interface to the 'HDF5' Binary Data Format |
| hdfqlr | Interface to 'HDFql' API |
| HDGLM | Tests for High Dimensional Generalized Linear Models |
| hdi | High-Dimensional Inference |
| HDInterval | Highest (Posterior) Density Intervals |
| HDiR | Directional Highest Density Regions |
| hdiVAR | Statistical Inference for Noisy Vector Autoregression |
| hdlm | Fitting High Dimensional Linear Models |
| HDLSSkST | Distribution-Free Exact High Dimensional Low Sample Size k-Sample Tests |
| hdm | High-Dimensional Metrics |
| HDMD | Statistical Analysis Tools for High Dimension Molecular Data (HDMD) |
| hdme | High-Dimensional Regression with Measurement Error |
| HDMT | A Multiple Testing Procedure for High-Dimensional Mediation Hypotheses |
| hdnom | Benchmarking and Visualization Toolkit for Penalized Cox Models |
| HDoutliers | Leland Wilkinson's Algorithm for Detecting Multidimensional Outliers |
| hdpca | Principal Component Analysis in High-Dimensional Data |
| HDPenReg | High-Dimensional Penalized Regression |
| hdpGLM | Hierarchical Dirichlet Process Generalized Linear Models |
| hdrcde | Highest Density Regions and Conditional Density Estimation |
| hds | Hazard Discrimination Summary |
| HDtest | High Dimensional Hypothesis Testing for Mean Vectors, Covariance Matrices, and White Noise of Vector Time Series |
| HDtweedie | The Lasso for the Tweedie's Compound Poisson Model Using an IRLS-BMD Algorithm |
| healthcareai | Tools for Healthcare Machine Learning |
| healthfinance | Financial Projections and Planning for Health Care Practices |
| healthforum | Scrape Patient Forum Data |
| healthyR | Hospital Data Analysis Workflow Tools |
| healthyR.data | Data Only Package to 'healthyR' |
| healthyR.ts | The Time Series Modeling Companion to 'healthyR' |
| healthyverse | Easily Install and Load the 'healthyverse' |
| heatex | Heat exchange calculations during physical activity |
| heatmap.plus | Heatmap with more sensible behavior |
| heatmap3 | An Improved Heatmap Package |
| heatmapFit | Fit Statistic for Binary Dependent Variable Models |
| heatmaply | Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2' |
| heatwaveR | Detect Heatwaves and Cold-Spells |
| heavy | Robust Estimation Using Heavy-Tailed Distributions |
| HeckmanEM | Fit Normal or Student-t Heckman Selection Models |
| heddlr | Dynamic R Markdown Document Generation |
| hedgehog | Property-Based Testing |
| heemod | Markov Models for Health Economic Evaluations |
| heims | Decode and Validate HEIMS Data from Department of Education, Australia |
| helda | Preprocess Data and Get Better Insights from Machine Learning Models |
| helixvis | Visualize Alpha-Helical Peptide Sequences |
| HellCor | The Hellinger Correlation |
| hellno | Providing 'stringsAsFactors=FALSE' Variants of 'data.frame()' and 'as.data.frame()' |
| helloJavaWorld | Hello Java World |
| helminthR | Access London Natural History Museum Host-Helminth Record Database |
| HelpersMG | Tools for Environmental Analyses, Ecotoxicology and Various R Functions |
| helsinki | R Tools for Helsinki Open Data |
| HEMDAG | Hierarchical Ensemble Methods for Directed Acyclic Graphs |
| heplots | Visualizing Hypothesis Tests in Multivariate Linear Models |
| here | A Simpler Way to Find Your Files |
| hereR | 'sf'-Based Interface to the 'HERE' REST APIs |
| heritability | Marker-Based Estimation of Heritability Using Individual Plant or Plot Data |
| heritEWAS | Identify Heritable Methylation Marks |
| HeritSeq | Heritability of Gene Expression for Next-Generation Sequencing |
| hermite | Generalized Hermite Distribution |
| hermiter | Efficient Sequential and Batch Estimation of Univariate and Bivariate Probability Density Functions and Cumulative Distribution Functions along with Quantiles (Univariate) and Spearman's Correlation (Bivariate) |
| hero | Spatio-Temporal (Hero) Sandwich Smoother |
| hesim | Health Economic Simulation Modeling and Decision Analysis |
| HeterFunctionalData | Test of No Main and/or Interaction Effects in Functional Data |
| HeteroGGM | Gaussian Graphical Model-Based Heterogeneity Analysis |
| hetGP | Heteroskedastic Gaussian Process Modeling and Design under Replication |
| HETOP | MLE and Bayesian Estimation of Heteroskedastic Ordered Probit (HETOP) Model |
| hett | Heteroscedastic t-Regression |
| hettreatreg | Heterogeneous Treatment Effects in Regression Analysis |
| hettx | Fisherian and Neymanian Methods for Detecting and Measuring Treatment Effect Variation |
| hetu | Structural Handling of Finnish Personal Identity Numbers |
| heuristica | Heuristics Including Take the Best and Unit-Weight Linear |
| heuristicsmineR | Discovery of Process Models with the Heuristics Miner |
| hexbin | Hexagonal Binning Routines |
| hexSticker | Create Hexagon Sticker in R |
| HextractoR | Integrated Tool for Hairping Extraction of RNA Sequences |
| hextri | Hexbin Plots with Triangles |
| hexView | Viewing Binary Files |
| hflights | Flights that departed Houston in 2011 |
| hglasso | Learning graphical models with hubs |
| hglm | Hierarchical Generalized Linear Models |
| hglm.data | Data for the 'hglm' Package |
| hgm | Holonomic Gradient Method and Gradient Descent |
| HGNChelper | Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols |
| HGSL | Heterogeneous Group Square-Root Lasso |
| hgutils | Collection of Utility Functions |
| HH | Statistical Analysis and Data Display: Heiberger and Holland |
| HHG | Heller-Heller-Gorfine Tests of Independence and Equality of Distributions |
| hhh4contacts | Age-Structured Spatio-Temporal Models for Infectious Disease Counts |
| hhi | Calculate and Visualize the Herfindahl-Hirschman Index |
| hht | The Hilbert-Huang Transform: Tools and Methods |
| HI | Simulation from distributions supported by nested hyperplanes |
| HiCfeat | Multiple Logistic Regression for 3D Chromatin Domain Border Analysis |
| HiClimR | Hierarchical Climate Regionalization |
| HiCseg | Detection of domains in HiC data |
| hiddenf | The All-Configurations, Maximum-Interaction F-Test for Hidden Additivity |
| HiddenMarkov | Hidden Markov Models |
| HiDimDA | High Dimensional Discriminant Analysis |
| hier.part | Hierarchical Partitioning |
| hierarchicalDS | Functions to Perform Hierarchical Analysis of Distance Sampling Data |
| hierarchicalSets | Set Data Visualization Using Hierarchies |
| hierband | Convex Banding of the Covariance Matrix |
| hierBipartite | Bipartite Graph-Based Hierarchical Clustering |
| hierDiversity | Hierarchical Multiplicative Partitioning of Complex Phenotypes |
| HierDpart | Partitioning Hierarchical Diversity and Differentiation Across Metrics and Scales, from Genes to Ecosystems |
| hierfstat | Estimation and Tests of Hierarchical F-Statistics |
| hierNet | A Lasso for Hierarchical Interactions |
| HierO | A graphical user interface for calculating power and sample size for hierarchical data |
| hiertest | Convex Hierarchical Testing of Interactions |
| HIest | Hybrid index estimation |
| highcharter | A Wrapper for the 'Highcharts' Library |
| highD2pop | Two-Sample Tests for Equality of Means in High Dimension |
| HighDimOut | Outlier Detection Algorithms for High-Dimensional Data |
| highDmean | Testing Two-Sample Mean in High Dimension |
| HighestMedianRules | Implementation of Voting Rules Electing the Candidate with Highest Median Grade |
| highfrequency | Tools for Highfrequency Data Analysis |
| highlight | Syntax Highlighter |
| highlightHTML | Highlight HTML Text and Tables |
| highmean | Two-Sample Tests for High-Dimensional Mean Vectors |
| highr | Syntax Highlighting for R Source Code |
| highriskzone | Determining and Evaluating High-Risk Zones |
| highSCREEN | High-Throughput Screening for Plate Based Essays |
| highTtest | Simultaneous Critical Values for t-Tests in Very High Dimensions |
| higlasso | Hierarchical Integrative Group LASSO |
| higrad | Statistical Inference for Online Learning and Stochastic Approximation via HiGrad |
| hilbertSimilarity | Hilbert Similarity Index for High Dimensional Data |
| hildareadR | Extract Variables from HILDA |
| hilldiv | Integral Analysis of Diversity Based on Hill Numbers |
| hillmakeR | Perform occupancy analysis |
| hillR | Diversity Through Hill Numbers |
| HiLMM | Estimation of Heritability in Linear Mixed Models |
| HIMA | High-Dimensional Mediation Analysis |
| hindex | Simulating the Development of h-Index Values |
| hindexcalculator | H-Index Calculator using Data from a Web of Science (WoS) Citation Report |
| hint | Tools for hypothesis testing based on Hypergeometric Intersection distributions |
| hiphop | Parentage Assignment using Bi-Allelic Genetic Markers |
| hiPOD | hierarchical Pooled Optimal Design |
| hipread | Read Hierarchical Fixed Width Files |
| HiResTEC | Non-Targeted Fluxomics on High-Resolution Mass-Spectrometry Data |
| hIRT | Hierarchical Item Response Theory Models |
| hisse | Hidden State Speciation and Extinction |
| HistData | Data Sets from the History of Statistics and Data Visualization |
| HistDAWass | Histogram-Valued Data Analysis |
| histmdl | A Most Informative Histogram-Like Model |
| histogram | Construction of Regular and Irregular Histograms with Different Options for Automatic Choice of Bins |
| HistogramTools | Utility Functions for R Histograms |
| historydata | Data Sets for Historians |
| histry | Enhanced Command History Tracking for R Sessions and Dynamic Documents |
| hit | Hierarchical Inference Testing |
| hitandrun | "Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes |
| HIV.LifeTables | HIV calibrated model life tables for countries with generalized HIV epidemics |
| hive | Hadoop InteractiVE |
| HiveR | 2D and 3D Hive Plots for R |
| hJAM | Hierarchical Joint Analysis of Marginal Summary Statistics |
| HK80 | Conversion Tools for HK80 Geographical Coordinate System |
| hkclustering | Ensemble Clustering using K Means and Hierarchical Clustering |
| hkdatasets | Datasets Related to Hong Kong |
| hkevp | Spatial Extreme Value Analysis with the Hierarchical Model of Reich and Shaby (2012) |
| hkex.api | API to Retrieve Data from Hong Kong Stock Exchange |
| HKprocess | Hurst-Kolmogorov Process |
| HLMdiag | Diagnostic Tools for Hierarchical (Multilevel) Linear Models |
| HLSM | Hierarchical Latent Space Network Model |
| HMB | Hierarchical Model-Based Estimation Approach |
| hmclearn | Fit Statistical Models Using Hamiltonian Monte Carlo |
| HMDHFDplus | Read Human Mortality Database and Human Fertility Database Data from the Web |
| hmeasure | The H-Measure and Other Scalar Classification Performance Metrics |
| hmgm | High-Dimensional Mixed Graphical Models Estimation |
| hmi | Hierarchical Multiple Imputation |
| Hmisc | Harrell Miscellaneous |
| hmlasso | Lasso with High Missing Rate |
| HMM | HMM - Hidden Markov Models |
| hmm.discnp | Hidden Markov Models with Discrete Non-Parametric Observation Distributions |
| hmma | Constructs Asymmetric Hidden Markov Models |
| HMMCont | Hidden Markov Model for Continuous Observations Processes |
| HMMcopula | Markov Regime Switching Copula Models Estimation and Goodness of Fit |
| HMMEsolver | A Fast Solver for Henderson Mixed Model Equation via Row Operations |
| HMMextra0s | Hidden Markov Models with Extra Zeros |
| hmmm | Hierarchical Multinomial Marginal Models |
| HMMmlselect | Determine the Number of States in Hidden Markov Models via Marginal Likelihood |
| HMMpa | Analysing Accelerometer Data Using Hidden Markov Models |
| HMP | Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP |
| HMPTrees | Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data |
| HMR | Flux Estimation with Static Chamber Data |
| hms | Pretty Time of Day |
| Hmsc | Hierarchical Model of Species Communities |
| hmstimer | 'hms' Based Timer |
| HMVD | Group Association Test using a Hidden Markov Model |
| hNMF | Hierarchical Non-Negative Matrix Factorization |
| hnp | Half-Normal Plots with Simulation Envelopes |
| hoa | Higher Order Likelihood Inference |
| hoardeR | Collect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices |
| hoardr | Manage Cached Files |
| hockeystick | Download and Visualize Essential Climate Change Data |
| holdem | Texas Holdem Simulator |
| Holidays | Holiday and Half-Day Data, for Use with the 'TimeWarp' Package |
| holodeck | A Tidy Interface for Simulating Multivariate Data |
| homals | Gifi Methods for Optimal Scaling |
| homeR | Useful Functions for Building Physics |
| Homeric | Doughnut Plots |
| hommel | Methods for Closed Testing with Simes Inequality, in Particular Hommel's Method |
| homologene | Quick Access to Homologene and Gene Annotation Updates |
| homomorpheR | Homomorphic Computations in R |
| homtest | Homogeneity tests for Regional Frequency Analysis |
| hopbyhop | Transmissions and Receptions in a Hop by Hop Network |
| hopit | Hierarchical Ordered Probit Models with Application to Reporting Heterogeneity |
| horizon | Horizon Search Algorithm |
| HoRM | Supplemental Functions and Datasets for "Handbook of Regression Methods" |
| hornpa | Horn's (1965) Test to Determine the Number of Components/Factors |
| horserule | Flexible Non-Linear Regression with the HorseRule Algorithm |
| horseshoe | Implementation of the Horseshoe Prior |
| horseshoenlm | Nonlinear Regression using Horseshoe Prior |
| hot.deck | Multiple Hot-Deck Imputation |
| Hotelling | Hotelling's T^2 Test and Variants |
| hotspot | Software Hotspot Analysis |
| hotspots | Hot Spots |
| housingData | U.S. Housing Data from 2008 to 2016 |
| hover | CSS Animations for 'shiny' Button Elements |
| howmany | A lower bound for the number of correct rejections |
| hpa | Distributions Hermite Polynomial Approximation |
| hpackedbubble | Create Split Packed Bubble Charts |
| HPbayes | Heligman Pollard mortality model parameter estimation using Bayesian Melding with Incremental Mixture Importance Sampling |
| hpcwld | High Performance Cluster Models Based on Kiefer-Wolfowitz Recursion |
| hpiR | House Price Indexes |
| HPLB | High-Probability Lower Bounds for the Total Variance Distance |
| hpoPlot | Functions for Plotting HPO Terms |
| hqmisc | Miscellaneous convenience functions and dataset |
| hqreg | Regularization Paths for Lasso or Elastic-Net Penalized Huber Loss Regression and Quantile Regression |
| hR | Toolkit for Data Analytics in Human Resources |
| hrbrthemes | Additional Themes, Theme Components and Utilities for 'ggplot2' |
| hrcomprisk | Nonparametric Assessment Between Competing Risks Hazard Ratios |
| hrIPW | Hazard Ratio Estimation using Cox Model Weighted by the Estimated Propensity Score |
| HRM | High-Dimensional Repeated Measures |
| HRM.curve | High-Resolution Melting (HRM) Curve Analysis |
| HRW | Datasets, Functions and Scripts for Semiparametric Regression Supporting Harezlak, Ruppert & Wand (2018) |
| HS | Homogenous Segmentation for Spatial Lines Data |
| HSAR | Hierarchical Spatial Autoregressive Model |
| HSAUR | A Handbook of Statistical Analyses Using R (1st Edition) |
| HSAUR2 | A Handbook of Statistical Analyses Using R (2nd Edition) |
| HSAUR3 | A Handbook of Statistical Analyses Using R (3rd Edition) |
| hscovar | Calculation of Covariance Between Markers for Half-Sib Families |
| hsdar | Manage, Analyse and Simulate Hyperspectral Data |
| HSDiC | Homogeneity and Sparsity Detection Incorporating Prior Constraint Information |
| hSDM | Hierarchical Bayesian Species Distribution Models |
| hse | The hse Distribution |
| hsicCCA | Canonical Correlation Analysis based on Kernel Independence Measures |
| hsm | A Path-Based BCD for Proximal Function of Latent Group Lasso |
| hsmm | Hidden Semi Markov Models |
| hsphase | Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data |
| HSPOR | Hidden Smooth Polynomial Regression for Rupture Detection |
| hsrecombi | Estimation of Recombination Rate and Maternal LD in Half-Sibs |
| hsstan | Hierarchical Shrinkage Stan Models for Biomarker Selection |
| htdp | Horizontal Time Dependent Positioning |
| htestClust | Reweighted Marginal Hypothesis Tests for Clustered Data |
| HTLR | Bayesian Logistic Regression with Heavy-Tailed Priors |
| htm2txt | Convert Html into Text |
| html2R | Convert 'HTML' to 'R' with a 'Shiny' App |
| html5 | Generates HTML Tag Strings for HTML5 Elements Included in Mozilla's Documentation of HTML5 |
| htmldf | Simple Scraping and Tidy Webpage Summaries |
| htmlTable | Advanced Tables for Markdown/HTML |
| htmltidy | Tidy Up and Test XPath Queries on HTML and XML Content |
| htmltools | Tools for HTML |
| HTMLUtils | Facilitates Automated HTML Report Creation |
| htmlwidgets | HTML Widgets for R |
| htree | Historical Tree Ensembles for Longitudinal Data |
| hts | Hierarchical and Grouped Time Series |
| HTSCluster | Clustering High-Throughput Transcriptome Sequencing (HTS) Data |
| htsr | Hydro-Meteorology Time-Series |
| HTSSIP | High Throughput Sequencing of Stable Isotope Probing Data Analysis |
| httk | High-Throughput Toxicokinetics |
| httpcache | Query Cache for HTTP Clients |
| httpcode | 'HTTP' Status Code Helper |
| httpgd | A 'HTTP' Server Graphics Device |
| httping | 'Ping' 'URLs' to Time 'Requests' |
| httpproblems | Report Errors in Web Applications with 'Problem Details' (RFC 7807) |
| httpRequest | Basic HTTP Request |
| httptest | A Test Environment for HTTP Requests |
| httpuv | HTTP and WebSocket Server Library |
| httr | Tools for Working with URLs and HTTP |
| hues | Distinct Colour Palettes Based on 'iwanthue' |
| huge | High-Dimensional Undirected Graph Estimation |
| HUM | compute HUM value and visualize ROC curves |
| humanFormat | Human-friendly formatting functions |
| humaniformat | A Parser for Human Names |
| humanize | Create Values for Human Consumption |
| humanleague | Synthetic Population Generator |
| humidity | Calculate Water Vapor Measures from Temperature and Dew Point |
| hunspell | High-Performance Stemmer, Tokenizer, and Spell Checker |
| HURDAT | Hurricane Re-Analysis Project |
| hurdlr | Zero-Inflated and Hurdle Modelling Using Bayesian Inference |
| hurricaneexposure | Explore and Map County-Level Hurricane Exposure in the United States |
| hutils | Miscellaneous R Functions and Aliases |
| hutilscpp | Miscellaneous Functions in C++ |
| huxtable | Easily Create and Style Tables for LaTeX, HTML and Other Formats |
| HW.pval | Testing Hardy-Weinberg Equilibrium for Multiallelic Genes |
| hwde | Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci |
| HWEBayes | Bayesian investigation of Hardy-Weinberg Equilibrium via estimation and testing |
| HWEintrinsic | Objective Bayesian Testing for the Hardy-Weinberg Equilibrium Problem |
| hwordcloud | Rendering Word Clouds |
| hwriter | HTML Writer - Outputs R objects in HTML format |
| hwwntest | Tests of White Noise using Wavelets |
| hybridEnsemble | Build, Deploy and Evaluate Hybrid Ensembles |
| HybridMC | Implementation of the Hybrid Monte Carlo and Multipoint Hybrid Monte Carlo sampling techniques |
| hybridModels | An R Package for the Stochastic Simulation of Disease Spreading in Dynamic Networks |
| HydeNet | Hybrid Bayesian Networks Using R and JAGS |
| hydra | Hyperbolic Embedding |
| hydraulics | Basic Pipe and Open Channel Hydraulics |
| hydroApps | Tools and models for hydrological applications |
| HydroCode | Hydrological Codes |
| hydrogeo | Groundwater Data Presentation and Interpretation |
| hydroGOF | Goodness-of-Fit Functions for Comparison of Simulated and Observed Hydrological Time Series |
| hydrolinks | Hydrologic Network Linking Data and Tools |
| HydroMe | Estimating Water Retention and Infiltration Model Parameters using Experimental Data |
| hydroPSO | Particle Swarm Optimisation, with Focus on Environmental Models |
| hydroscoper | Interface to the Greek National Data Bank for Hydrometeorological Information |
| hydrostats | Hydrologic Indices for Daily Time Series Data |
| hydroToolkit | Hydrological Tools for Handling Hydro-Meteorological Data from Argentina and Chile |
| hydroTSM | Time Series Management, Analysis and Interpolation for Hydrological Modelling |
| hyfo | Hydrology and Climate Forecasting |
| hyper.fit | Generic N-Dimensional Hyperplane Fitting with Heteroscedastic Covariant Errors and Intrinsic Scatter |
| hyper2 | The Hyperdirichlet Distribution, Mark 2 |
| HyperbolicDist | The hyperbolic distribution |
| hypercube | Organizing Data in Hypercubes |
| hypergate | Machine Learning of Hyperrectangular Gating Strategies for High-Dimensional Cytometry |
| hypergeo | The Gauss Hypergeometric Function |
| HypergeoMat | Hypergeometric Function of a Matrix Argument |
| hyperoverlap | Overlap Detection in n-Dimensional Space |
| hypersampleplan | Attribute Sampling Plan with Exact Hypergeometric Probabilities using Chebyshev Polynomials |
| hyperSMURF | Hyper-Ensemble Smote Undersampled Random Forests |
| hyperSpec | Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...) |
| hypervolume | High Dimensional Geometry and Set Operations Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls |
| HyPhy | Macroevolutionary phylogentic analysis of species trees and gene trees |
| hypothesestest | Confidence Intervals and Tests of Statistical Hypotheses |
| hypothesisr | Wrapper for the 'Hypothes.is' Web Annotation Service |
| hypr | Hypothesis Matrix Translation |
| HyRiM | Multicriteria Risk Management using Zero-Sum Games with Vector-Valued Payoffs that are Probability Distributions |
| HYRISK | Hybrid Methods for Addressing Uncertainty in RISK Assessments |
| hySpc.testthat | 'testthat' Unit Test Enhancements |
| hysteresis | Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses |
| hystReet | Get Pedestrian Frequency Data from the 'Hystreet' Project |
| hzar | Hybrid Zone Analysis using R |
| i2dash | Iterative and Interactive Dashboards |
| i2extras | Functions to Work with 'incidence2' Objects |
| IAbin | Plotting N-T Plane for Decision on Performing an Interim Analysis |
| IAcsSPCR | Data and Functions for "An Intro. to Accept. Samp. & SPC/R" |
| iAdapt | Two-Stage Adaptive Dose-Finding Clinical Trial Design |
| iadf | Analysis of Intra Annual Density Fluctuations |
| iai | Interface to 'Interpretable AI' Modules |
| ialiquor | Monthly Iowa Liquor Sales Summary |
| IalsaSynthesis | Synthesizing Information Across Collaborating Research |
| iarm | Item Analysis in Rasch Models |
| IASD | Model Selection for Index of Asymmetry Distribution |
| IAT | Cleaning and Visualizing Implicit Association Test (IAT) Data |
| IATanalytics | Compute Effect Sizes and Reliability for Implicit Association Test (IAT) Data |
| IATScore | Scoring Algorithm for the Implicit Association Test (IAT) |
| IATscores | Implicit Association Test Scores Using Robust Statistics |
| ib | Bias Correction via Iterative Bootstrap |
| iBATCGH | Integrative Bayesian Analysis of Transcriptomic and CGH Data |
| ibb | R Wrapper for Istanbul Municipality Open Data Portal |
| IBCF.MTME | Item Based Collaborative Filtering for Multi-Trait and Multi-Environment Data |
| ibd | Incomplete Block Designs |
| IBDhaploRtools | Functions for the Analysis of IBD Haplo Output |
| IBDLabels | Convert Between Different IBD-State Labelling Schemes |
| ibdreg | Regression Methods for IBD Linkage with Covariates |
| IBDsim | Simulation of Chromosomal Regions Shared by Family Members |
| ibdsim2 | Simulation of Chromosomal Regions Shared by Family Members |
| ibeemd | Irregular-lattice based ensemble empirical mode decomposition |
| ibelief | Belief Function Implementation |
| ibm | Individual Based Models in R |
| ibmAcousticR | Connect to Your 'IBM Acoustic' Data |
| ibmcraftr | Toolkits to Develop Individual-Based Models in Infectious Disease |
| ibmdbR | IBM in-Database Analytics for R |
| IBMPopSim | Individual Based Model Population Simulation |
| ibmsunburst | Generate Personality Insights Sunburst Diagrams |
| Iboot | Iboot: iterated bootstrap tests and confidence sets |
| ibr | Iterative Bias Reduction |
| iBreakDown | Model Agnostic Instance Level Variable Attributions |
| IBrokers | R API to Interactive Brokers Trader Workstation |
| ibs | Integral of B-Spline Functions |
| iBST | Improper Bagging Survival Tree |
| ic.infer | Inequality Constrained Inference in Linear Normal Situations |
| iC10 | A Copy Number and Expression-Based Classifier for Breast Tumours |
| iC10TrainingData | Training Datasets for iC10 Package |
| IC2 | Inequality and Concentration Indices and Curves |
| ic50 | Standardized high-throughput evaluation of cell-based compound screens |
| ica | Independent Component Analysis |
| ICAFF | Imperialist Competitive Algorithm |
| ical | 'iCalendar' Parsing |
| iCAMP | Infer Community Assembly Mechanisms by Phylogenetic-Bin-Based Null Model Analysis |
| ICAMS | In-depth Characterization and Analysis of Mutational Signatures ('ICAMS') |
| ICAOD | Optimal Designs for Nonlinear Statistical Models by Imperialist Competitive Algorithm (ICA) |
| icapca | Mixed ICA/PCA |
| iCARH | Integrative Conditional Autoregressive Horseshoe Model |
| icarus | Calibrates and Reweights Units in Samples |
| ICBayes | Bayesian Semiparametric Models for Interval-Censored Data |
| ICBioMark | Data-Driven Design of Targeted Gene Panels for Estimating Immunotherapy Biomarkers |
| ICC | Facilitating Estimation of the Intraclass Correlation Coefficient |
| ICC.Sample.Size | Calculation of Sample Size and Power for ICC |
| ICcalib | Cox Model with Interval-Censored Starting Time of a Covariate |
| iccbeta | Multilevel Model Intraclass Correlation for Slope Heterogeneity |
| ICCbin | Facilitates Clustered Binary Data Generation, and Estimation of Intracluster Correlation Coefficient (ICC) for Binary Data |
| iccde | Computation of the Double-Entry Intraclass Correlation |
| ICcforest | An Ensemble Method for Interval-Censored Survival Data |
| icd.data | International Classifcation of Diseases (ICD) Data |
| ICD10gm | Metadata Processing for the German Modification of the ICD-10 Coding System |
| icdGLM | EM by the Method of Weights for Incomplete Categorical Data in Generlized Linear Models |
| icdpicr | 'ICD' Programs for Injury Categorization in R |
| ICDS | Identification of Cancer Dysfunctional Subpathway by Integrating DNA Methylation, Copy Number Variation, and Gene Expression Data |
| ICE | Iterated Conditional Expectation |
| ICEbox | Individual Conditional Expectation Plot Toolbox |
| IceCast | Apply Statistical Post-Processing to Improve Sea Ice Predictions |
| ICEinfer | Incremental Cost-Effectiveness Inference using Two Unbiased Samples |
| iCellR | Analyzing High-Throughput Single Cell Sequencing Data |
| icemelt | Parameter Estimation in Linear Transformation Model with Interval-Censored Data and Covariate Measurement Error |
| icenReg | Regression Models for Interval Censored Data |
| icensBKL | Accompanion to the Book on Interval Censoring by Bogaerts, Komarek, and Lesaffre |
| icensmis | Study Design and Data Analysis in the Presence of Error-Prone Diagnostic Tests and Self-Reported Outcomes |
| icesAdvice | Functions Related to ICES Advice |
| icesDatras | DATRAS Trawl Survey Database Web Services |
| icesTAF | Functions to Support the ICES Transparent Assessment Framework |
| icesVocab | ICES Vocabularies Database Web Services |
| ICGE | Estimation of number of clusters and identification of atypical units |
| ICGOR | Fit Generalized Odds Rate Hazards Model with Interval Censored Data |
| iCiteR | A Minimal Wrapper Around NIH's 'iCite' API |
| iClick | A Button-Based GUI for Financial and Economic Data Analysis |
| iCluster | Integrative clustering of multiple genomic data types |
| icmm | Empirical Bayes Variable Selection via ICM/M Algorithm |
| ICODS | Data Analysis for ODS and Case-Cohort Designs with Interval-Censoring |
| ICON | Provides Easy Access to Complex Systems Datasets |
| iconr | Graphical and Spatial Analysis for Prehistoric Iconography |
| icosa | Global Triangular and Penta-Hexagonal Grids Based on Tessellated Icosahedra |
| icpsrdata | Reproducible Data Retrieval from the ICPSR Archive |
| icr | Compute Krippendorff's Alpha |
| ICRanks | Simultaneous Confidence Intervals for Ranks |
| icrf | Interval Censored Recursive Forests |
| icRSF | A Modified Random Survival Forest Algorithm |
| ICS | Tools for Exploring Multivariate Data via ICS/ICA |
| ICSNP | Tools for Multivariate Nonparametrics |
| ICSOutlier | Outlier Detection Using Invariant Coordinate Selection |
| ICSS | ICSS Algorithm by Inclan/Tiao (1994) |
| ICSShiny | ICS via a Shiny Application |
| ICSsmoothing | Data Smoothing by Interpolating Cubic Splines |
| ICsurv | A package for semiparametric regression analysis of interval-censored data |
| icsw | Inverse Compliance Score Weighting |
| ICtest | Estimating and Testing the Number of Interesting Components in Linear Dimension Reduction |
| ICV | Indirect Cross-Validation (ICV) for Kernel Density Estimation |
| idar | Individual Diversity-Area Relationships |
| idbg | R debugger |
| idbr | R Interface to the US Census Bureau International Data Base API |
| IDCard | Update Chinese ID Card Number to Eighteen Digits |
| IDE | Integro-Difference Equation Spatio-Temporal Models |
| ideamdb | Easy Manipulation of IDEAM's Climatological Data |
| idefix | Efficient Designs for Discrete Choice Experiments |
| idem | Inference in Randomized Controlled Trials with Death and Missingness |
| idendr0 | Interactive Dendrograms |
| identity | Jacquard Condensed Coefficients of Identity |
| ideq | Bayesian Dynamic Spatio-Temporal Models, Including the Integrodifference Equation Model |
| ider | Various Methods for Estimating Intrinsic Dimension |
| IDetect | Isolate-Detect Methodology for Multiple Change-Point Detection |
| IDF | Estimation and Plotting of IDF Curves |
| iDINGO | Integrative Differential Network Analysis in Genomics |
| idiogramFISH | Shiny App. Idiograms with Marks and Karyotype Indices |
| idm | Incremental Decomposition Methods |
| IDmeasurer | Assessment of Individual Identity in Animal Signals |
| IDmining | Intrinsic Dimension for Data Mining |
| idmodelr | Infectious Disease Model Library and Utilities |
| idmTPreg | Regression Model for Progressive Illness Death Data |
| iDOS | Integrated Discovery of Oncogenic Signatures |
| IDPmisc | 'Utilities of Institute of Data Analyses and Process Design (www.zhaw.ch/idp)' |
| IDPSurvival | Imprecise Dirichlet Process for Survival Analysis |
| idr | Irreproducible discovery rate |
| ids | Generate Random Identifiers |
| IDSA | An Interactive Detector for Spatial Associations |
| IDSpatialStats | Estimate Global Clustering in Infectious Disease |
| idx2r | Convert Files to and from IDX Format to Vectors, Matrices and Arrays |
| iDynoR | R Analysis package for iDynoMiCS Simulation Results |
| ie2misc | Irucka Embry's Miscellaneous USGS Functions |
| ieeeround | Functions to set and get the IEEE rounding mode |
| iemisc | Irucka Embry's Miscellaneous Functions |
| iemiscdata | Irucka Embry's Miscellaneous Data Collection |
| iemisctext | Irucka Embry's Miscellaneous Text Collection |
| IETD | Inter-Event Time Definition |
| ifa | Independent Factor Analysis |
| IFAA | Robust Analysis for Absolute Abundance in Microbiome |
| iFad | An integrative factor analysis model for drug-pathway association inference |
| ifaTools | Toolkit for Item Factor Analysis with 'OpenMx' |
| IFC | Tools for Imaging Flow Cytometry |
| ifctools | Italian Fiscal Code ('Codice Fiscale') Utilities |
| iForecast | Machine Learning Time Series Forecasting |
| IFP | Identifying Functional Polymorphisms |
| ifs | Iterated Function Systems |
| ifultools | Insightful Research Tools |
| ig.vancouver.2014.topcolour | Instagram 2014 Vancouver Top Colour Dataset |
| IgAScores | Score Taxon-Level IgA Binding in IgA-Seq Experiments |
| iGasso | Statistical Tests and Utilities for Genetic Association |
| igate | Guided Analytics for Testing Manufacturing Parameters |
| IGG | Inverse Gamma-Gamma |
| iglu | Interpreting Glucose Data from Continuous Glucose Monitors |
| igoR | Intergovernmental Organizations Database |
| IgorR | Read Binary Files Saved by 'Igor Pro' (Including 'Neuromatic' Data) |
| igraph | Network Analysis and Visualization |
| igraphdata | A Collection of Network Data Sets for the 'igraph' Package |
| igraphinshiny | Use 'shiny' to Demo 'igraph' |
| iGraphMatch | Tools Graph Matching |
| igraphtosonia | Convert iGraph graps to SoNIA .son files |
| iGSEA | Integrative Gene Set Enrichment Analysis Approaches |
| IGST | Informative Gene Selection Tool |
| iheatmapr | Interactive, Complex Heatmaps |
| ihpdr | Download Data from the International House Price Database |
| IHSEP | Inhomogeneous Self-Exciting Process |
| iilasso | Independently Interpretable Lasso |
| iIneq | Computing Individual Components of the Gini and the Theil Indices |
| ijtiff | Comprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files |
| ilc | Lee-Carter Mortality Models using Iterative Fitting Algorithms |
| ILS | Interlaboratory Study |
| IMAGE | Integrated Methylation QTL Mapping and Allele-Specific Analysis |
| image.binarization | Binarize Images for Enhancing Optical Character Recognition |
| image.CannyEdges | Implementation of the Canny Edge Detector for Images |
| image.ContourDetector | Implementation of the Unsupervised Smooth Contour Line Detection for Images |
| image.CornerDetectionF9 | Find Corners in Digital Images with FAST-9 |
| image.CornerDetectionHarris | Implementation of the Harris Corner Detection for Images |
| image.dlib | Image Processing Functionality using the 'dlib' Package |
| image.libfacedetection | Convolutional Neural Network for Face Detection |
| image.LineSegmentDetector | Detect Line Segments in Images |
| image.Otsu | Otsu's Image Segmentation Method |
| image.textlinedetector | Segment Images in Text Lines and Words |
| imageData | Aids in Processing and Plotting Data from a Lemna-Tec Scananalyzer |
| imagefluency | Image Statistics Based on Processing Fluency |
| imagefx | Extract Features from Images |
| imager | Image Processing Library Based on 'CImg' |
| imagerExtra | Extra Image Processing Library Based on 'imager' |
| IMaGES | Independent Multiple-Sample Greedy Equivalence Search Implementation |
| imageviewer | Simple 'htmlwidgets' Image Viewer with WebGL Brightness/Contrast |
| imagine | IMAGing engINEs, Tools for Application of Image Filters to Data Matrices |
| ImaginR | Delimit and Characterize Color Phenotype of the Pearl Oyster |
| IMak | Item Maker |
| Imap | Interactive Mapping |
| imbalance | Preprocessing Algorithms for Imbalanced Datasets |
| imbibe | A Pipe-Friendly Image Calculator |
| imdbapi | Get Movie, Television Data from the 'imdb' Database |
| IMEC | Ising Model of Explanatory Coherence |
| iMediate | Likelihood Methods for Mediation Analysis |
| IMFData | R Interface for International Monetary Fund(IMF) Data API |
| imfr | Download Data from the International Monetary Fund's Data API |
| imgpalr | Create Color Palettes from Images |
| imgrec | Image Recognition |
| imguR | An Imgur.com API Client Package |
| IMIFA | Infinite Mixtures of Infinite Factor Analysers and Related Models |
| IMIX | Gaussian Mixture Model for Multi-Omics Data Integration |
| iml | Interpretable Machine Learning |
| IMmailgun | Send Emails using 'Mailgun' |
| immcp | Candidate Prescriptions Discovery Based on Pathway Fingerprint |
| immer | Item Response Models for Multiple Ratings |
| Immigrate | Iterative Max-Min Entropy Margin-Maximization with Interaction Terms for Feature Selection |
| immunarch | Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires |
| immuneSIM | Tunable Simulation of B- And T-Cell Receptor Repertoires |
| IMP | Interactive Model Performance Evaluation |
| imp4p | Imputation for Proteomics |
| IMPACT | The Impact of Items |
| ImpactEffectsize | Calculation and Visualization of the Impact Effect Size Measure |
| impactflu | Quantification of Population-Level Impact of Vaccination |
| impimp | Imprecise Imputation for Statistical Matching |
| implicitMeasures | Compute Scores for Different Implicit Measures |
| implied | Convert Bookmaker Odds to Probabilities |
| implyr | R Interface for Apache Impala |
| import | An Import Mechanism for R |
| importar | Enables Importing/Loading of Packages or Functions While Creating an Alias for Them |
| ImportExport | Import and Export Data |
| importinegi | Download and Manage Open Data from INEGI |
| impressionist.colors | Impressionism's Color Palettes |
| imptree | Classification Trees with Imprecise Probabilities |
| imputeFin | Imputation of Financial Time Series with Missing Values and/or Outliers |
| imputeLCMD | A collection of methods for left-censored missing data imputation |
| imputeMDR | The Multifactor Dimensionality Reduction (MDR) Analysis for Incomplete Data |
| imputeMissings | Impute Missing Values in a Predictive Context |
| imputeMulti | Imputation Methods for Multivariate Multinomial Data |
| imputePSF | Impute Missing Data in Time Series Data with PSF Based Method |
| imputeR | A General Multivariate Imputation Framework |
| ImputeRobust | Robust Multiple Imputation with Generalized Additive Models for Location Scale and Shape |
| imputeTestbench | Test Bench for the Comparison of Imputation Methods |
| imputeTS | Time Series Missing Value Imputation |
| imputeYn | Imputing the Last Largest Censored Observation(s) Under Weighted Least Squares |
| iMRMC | Multi-Reader, Multi-Case Analysis Methods (ROC, Agreement, and Other Metrics) |
| imsig | Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours |
| IMTest | Information Matrix Test for Generalized Partial Credit Models |
| in2extRemes | Into the extRemes Package |
| inaparc | Initialization Algorithms for Partitioning Cluster Analysis |
| inbreedR | Analysing Inbreeding Based on Genetic Markers |
| inca | Integer Calibration |
| incadata | Recognize and Handle Data in Formats Used by Swedish Cancer Centers |
| incase | Pipe-Friendly Vector Replacement with Case Statements |
| INCATome | Internal Control Analysis of Translatome Studies by Microarrays |
| IncDTW | Incremental Calculation of Dynamic Time Warping |
| incgraph | Incremental Graphlet Counting for Network Optimisation |
| incidence | Compute, Handle, Plot and Model Incidence of Dated Events |
| incidence2 | Compute, Handle and Plot Incidence of Dated Events |
| incidental | Implements Empirical Bayes Incidence Curves |
| IncomPair | Comparison of Means for the Incomplete Paired Data |
| incR | Analysis of Incubation Data |
| inctools | Incidence Estimation Tools |
| indelmiss | Insertion Deletion Analysis While Accounting for Possible Missing Data |
| independence | Fast Rank-Based Independence Testing |
| IndependenceTests | Non-Parametric Tests of Independence Between Random Vectors |
| IndepTest | Nonparametric Independence Tests Based on Entropy Estimation |
| IndexConstruction | Index Construction for Time Series Data |
| IndexNumber | Index Numbers in Social Sciences |
| IndexNumR | Index Number Calculation |
| IndianTaxCalc | Indian Income Tax Calculator |
| indicspecies | Relationship Between Species and Groups of Sites |
| indirect | Elicitation of Independent Conditional Means Priors for Generalised Linear Models |
| InDisc | Obtaining and Estimating Unidimensional IRT Dual Models |
| IndTestPP | Tests of Independence and Analysis of Dependence Between Point Processes in Time |
| inegiR | Integrate INEGI’s (Mexican Stats Office) API with R |
| ineq | Measuring Inequality, Concentration, and Poverty |
| ineqJD | Inequality Joint Decomposition |
| iNEXT | Interpolation and Extrapolation for Species Diversity |
| InfDim | Infine-dimensional model (IDM) to analyse phenotypic variation in growth trajectories |
| infer | Tidy Statistical Inference |
| inference | Functions to extract inferential values of a fitted model object |
| InferenceSMR | Inference about the standardized mortality ratio when evaluating the effect of a screening program on survival |
| inferference | Methods for Causal Inference with Interference |
| inferr | Inferential Statistics |
| infinitefactor | Bayesian Infinite Factor Models |
| InfiniumPurify | Estimate and Account for Tumor Purity in Cancer Methylation Data Analysis |
| infix | Basic Infix Binary Operators |
| Inflation | Core Inflation |
| Inflect | Melt Curve Fitting and Melt Shift Analysis |
| inflection | Finds the Inflection Point of a Curve |
| influence.ME | Tools for Detecting Influential Data in Mixed Effects Models |
| influence.SEM | Case Influence in Structural Equation Models |
| influenceAUC | Identify Influential Observations in Binary Classification |
| influenceR | Software Tools to Quantify Structural Importance of Nodes in a Network |
| influential | Identification and Classification of the Most Influential Nodes |
| influxdbr | R Interface to InfluxDB |
| infoDecompuTE | Information Decomposition of Two-Phase Experiments |
| Information | Data Exploration with Information Theory (Weight-of-Evidence and Information Value) |
| InformationValue | Performance Analysis and Companion Functions for Binary Classification Models |
| InformativeCensoring | Multiple Imputation for Informative Censoring |
| informR | Sequence Statistics for Relational Event Models |
| infotheo | Information-Theoretic Measures |
| InfoTrad | Calculates the Probability of Informed Trading (PIN) |
| infra | An Infrastructure Proxy Function |
| infraFDTD.assist | IO Help for infraFDTD Model |
| Infusion | Inference Using Simulation |
| infutil | Information Utility |
| ingredients | Effects and Importances of Model Ingredients |
| ini | Read and Write '.ini' Files |
| injectoR | R Dependency Injection |
| InjurySeverityScore | Translate ICD-9 into Injury Severity Score |
| INLABMA | Bayesian Model Averaging with INLA |
| inlabru | Spatial Inference using Integrated Nested Laplace Approximation |
| INLAMSM | Multivariate Spatial Models with 'INLA' |
| inldata | Collection of Datasets for the USGS-INL Aquifer Monitoring Networks |
| inline | Functions to Inline C, C++, Fortran Function Calls from R |
| inlinedocs | Convert Inline Comments to Documentation |
| inlmisc | Miscellaneous Functions for the USGS INL Project Office |
| inops | Infix Operators for Detection, Subsetting and Replacement |
| inpdfr | Analyse Text Documents Using Ecological Tools |
| inplace | In-place Operators for R |
| InPosition | Inference Tests for ExPosition |
| INQC | Quality Control of Climatological Daily Time Series |
| insane | INsulin Secretion ANalysEr |
| insect | Informatic Sequence Classification Trees |
| insee | Tools to Easily Download Data from INSEE BDM Database |
| insight | Easy Access to Model Information for Various Model Objects |
| InSilicoVA | Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm |
| insol | Solar Radiation |
| InspectChangepoint | High-Dimensional Changepoint Estimation via Sparse Projection |
| inspectdf | Inspection, Comparison and Visualisation of Data Frames |
| inspector | Validation of Arguments and Objects in User-Defined Functions |
| INSPIRE | Inferring Shared Modules from Multiple Gene Expression Datasets with Partially Overlapping Gene Sets |
| install.load | Check, Install and Load CRAN & USGS GRAN Packages |
| installr | Using R to Install Stuff on Windows OS (Such As: R, 'Rtools', 'RStudio', 'Git', and More!) |
| instaR | Access to Instagram API via R |
| insuranceData | A Collection of Insurance Datasets Useful in Risk Classification in Non-life Insurance |
| insurancerating | Analytic Insurance Rating Techniques |
| intamap | Procedures for Automated Interpolation |
| intamapInteractive | Interactive Add-on Functionality for 'intamap' |
| IntCal | Radiocarbon Calibration Curves |
| intccr | Semiparametric Competing Risks Regression under Interval Censoring |
| intcensROC | AUC Estimation of Interval Censored Survival Data |
| IntClust | Integration of Multiple Data Sets with Clustering Techniques |
| intdag | Reconstruction of a Directed Acyclic Graph with Interventions |
| integIRTy | Integrating Multiple Modalities of High Throughput Assays Using Item Response Theory |
| integr | An Implementation of Interaction Graphs of Aleks Jakulin |
| IntegrateBs | Integration for B-Spline |
| IntegratedJM | Joint Modeling of the Gene-Expression and Bioassay Data, Taking Care of the Effect Due to a Fingerprint Feature |
| IntegratedMRF | Integrated Prediction using Uni-Variate and Multivariate Random Forests |
| intensegRid | R Wrapper for the Carbon Intensity API |
| intensity.analysis | Intensity of Change for Comparing Categorical Maps from Sequential Intervals |
| interacCircos | The Visualization of Interactive Circos Plot |
| Interact | Tests for marginal interactions in a 2 class response model |
| interactionR | Full Reporting of Interaction Analyses |
| interactions | Comprehensive, User-Friendly Toolkit for Probing Interactions |
| interactionTest | Calculates Critical Test Statistics to Control False Discovery Rates in Marginal Effects Plots |
| InteractiveIGraph | interactive network analysis and visualization |
| Interatrix | Compute Chi-Square Measures with Corrections |
| interep | Interaction Analysis of Repeated Measure Data |
| InterfaceqPCR | GUI to Analyse qPCR Results after PMA Treatment or not |
| interferenceCI | Exact Confidence Intervals in the Presence of Interference |
| interfr | Interference Color Charts for Polarized Light Microscopy |
| intergraph | Coercion Routines for Network Data Objects |
| interim | Scheduling Interim Analyses in Clinical Trials |
| interimApp | App for Scheduling Interim Analyses in Clinical Trials |
| interleave | Converts Tabular Data to Interleaved Vectors |
| interlineaR | Importing Interlinearized Corpora and Dictionaries as Produced by Descriptive Linguistics Software |
| interp | Interpolation Methods |
| interplot | Plot the Effects of Variables in Interaction Terms |
| Interpol.T | Hourly interpolation of multiple temperature daily series |
| interpret | Fit Interpretable Machine Learning Models |
| InterpretMSSpectrum | Interpreting High Resolution Mass Spectra |
| interpretR | Binary Classifier and Regression Model Interpretation Functions |
| InterSIM | Simulation of Inter-Related Genomic Datasets |
| InterVA4 | Replicate and Analyse 'InterVA4' |
| InterVA5 | Replicate and Analyse 'InterVA5' |
| interval | Weighted Logrank Tests and NPMLE for Interval Censored Data |
| intervalaverage | Time-Weighted Averaging for Interval Data |
| intervals | Tools for Working with Points and Intervals |
| IntervalSurgeon | Operating on Integer-Bounded Intervals |
| intervcomp | Hypothesis Testing Using the Overlapping Interval Estimates |
| interventionalDBN | Interventional Inference for Dynamic Bayesian Networks |
| inti | Tools and Statistical Procedures in Plant Science |
| intkrige | A Numerical Implementation of Interval-Valued Kriging |
| IntLik | Numerical Integration for Integrated Likelihood |
| intmed | Mediation Analysis using Interventional Effects |
| IntNMF | Integrative Clustering of Multiple Genomic Dataset |
| intoo | Minimal Language-Like Extensions |
| inTrees | Interpret Tree Ensembles |
| intRegGOF | Integrated Regression Goodness of Fit |
| INTRIGUE | Quantify and Control Reproducibility in High-Throughput Experiments |
| intrinsicDimension | Intrinsic Dimension Estimation |
| introgress | methods for analyzing introgression between divergent lineages |
| intrval | Relational Operators for Intervals |
| intRvals | Analysis of Time-Ordered Event Data with Missed Observations |
| intsurv | Integrative Survival Modeling |
| intsurvbin | Survival and Binary Data Integration |
| intsvy | International Assessment Data Manager |
| intubate | Interface to Popular R Functions for Data Science Pipelines |
| inum | Interval and Enum-Type Representation of Vectors |
| invacost | Analyse Biological Invasion Costs with the 'InvaCost' Database |
| InvariantCausalPrediction | Invariant Causal Prediction |
| InvasionCorrection | Invasion Correction |
| invctr | Infix Functions For Vector Operations |
| inventorize | Inventory Analytics and Cost Calculations |
| Inventorymodel | Inventory Models |
| inverseRegex | Reverse Engineers Regular Expression Patterns for R Objects |
| investr | Inverse Estimation/Calibration Functions |
| invgamma | The Inverse Gamma Distribution |
| invGauss | Threshold regression that fits the (randomized drift) inverse Gaussian distribution to survival data |
| invLT | Inversion of Laplace-Transformed Functions |
| iNZightMR | Tools for Exploring Multiple Response Data |
| iNZightPlots | Graphical Tools for Exploring Data with 'iNZight' |
| iNZightRegression | Tools for Exploring Regression Models with 'iNZight' |
| iNZightTools | Tools for 'iNZight' |
| iNZightTS | Time Series for 'iNZight' |
| io | A Unified Framework for Input-Output Operations in R |
| ioanalysis | Input Output Analysis |
| IOHanalyzer | Data Analysis Part of 'IOHprofiler' |
| IOHexperimenter | Benchmarking Part of the 'IOHprofiler' |
| ioncopy | Calling Copy Number Alterations in Amplicon Sequencing Data |
| ionflows | Calculate the Number of Required Flows for Semiconductor Sequencing |
| ionr | Test for Indifference of Indicator |
| iopsych | Methods for Industrial/Organizational Psychology |
| iosmooth | Functions for Smoothing with Infinite Order Flat-Top Kernels |
| iotools | I/O Tools for Streaming |
| ip2location | Lookup for IP Address Information |
| ip2proxy | Lookup for IP Address Proxy Information |
| ipa | Convert Between Phonetic Alphabets |
| ipaddress | Tidy IP Addresses |
| ipADMIXTURE | Iterative Pruning Population Admixture Inference Framework |
| ipc | Tools for Message Passing Between Processes |
| IPCAPS | Iterative Pruning to Capture Population Structure |
| IPCWK | Kendall's Tau Partial Corr. for Survival Trait and Biomarkers |
| ipcwswitch | Inverse Probability of Censoring Weights to Deal with Treatment Switch in Randomized Clinical Trials |
| IPDFileCheck | Basic Functions to Check Readability, Consistency, and Content of an Individual Participant Data File |
| IPDfromKM | Map Digitized Survival Curves Back to Individual Patient Data |
| ipdw | Spatial Interpolation by Inverse Path Distance Weighting |
| ipeadatar | API Wrapper for 'Ipeadata' |
| IPEC | Root Mean Square Curvature Calculation |
| ipflasso | Integrative Lasso with Penalty Factors |
| ipfp | Fast Implementation of the Iterative Proportional Fitting Procedure in C |
| ipfr | List Balancing for Reweighting and Population Synthesis |
| ipft | Indoor Positioning Fingerprinting Toolset |
| ipify | Query the Ipify Service |
| IPLGP | Identification of Parental Lines via Genomic Prediction |
| iplots | iPlots - interactive graphics for R |
| ipmisc | Miscellaneous Functions for Data Cleaning and Analysis |
| ipmr | Fits Integral Projection Models Using an Expression Based Framework |
| IPMRF | Intervention in Prediction Measure (IPM) for Random Forests |
| IPPP | Inhomogeneous Poisson Point Processes |
| ipptoolbox | IPP Toolbox |
| ipr | Iterative Proportional Repartition Algorithm |
| ipred | Improved Predictors |
| iprior | Regression Modelling using I-Priors |
| ips | Interfaces to Phylogenetic Software in R |
| iptmnetr | Interface to the 'iPTMnet' API |
| iptools | Manipulate, Validate and Resolve 'IP' Addresses |
| ipumsr | Read 'IPUMS' Extract Files |
| IPV | Item Pool Visualization |
| ipw | Estimate Inverse Probability Weights |
| IPWboxplot | Adapted Boxplot to Missing Observations |
| ipwCoxCSV | Inverse Probability Weighted Cox Model with Corrected Sandwich Variance |
| ipwErrorY | Inverse Probability Weighted Estimation of Average Treatment Effect with Misclassified Binary Outcome |
| iq | Protein Quantification in Mass Spectrometry-Based Proteomics |
| IQCC | Improved Quality Control Charts |
| iqLearn | Interactive Q-Learning |
| irace | Iterated Racing for Automatic Algorithm Configuration |
| iRafNet | Integrative Random Forest for Gene Regulatory Network Inference |
| IRATER | A R Interface for the Instantaneous RATEs (IRATE) Model |
| ircor | Correlation Coefficients for Information Retrieval |
| IRdisplay | 'Jupyter' Display Machinery |
| iRegression | Regression Methods for Interval-Valued Variables |
| iRepro | Reproducibility for Interval-Censored Data |
| Irescale | Calculate and Rectify Moran's I |
| iRF | iterative Random Forests |
| irg | Instantaneous Rate of Green Up |
| iriR | Global Innovation Through Company Level Data |
| IrishDirectorates | A Dynamic Bipartite Latent Space Model to Analyse Irish Companies' Boards from 2003 to 2013 |
| IRISMustangMetrics | Statistics and Metrics for Seismic Data |
| IRISSeismic | Classes and Methods for Seismic Data Analysis |
| IRkernel | Native R Kernel for the 'Jupyter Notebook' |
| irlba | Fast Truncated Singular Value Decomposition and Principal Components Analysis for Large Dense and Sparse Matrices |
| irr | Various Coefficients of Interrater Reliability and Agreement |
| irrCAC | Computing Chance-Corrected Agreement Coefficients (CAC) |
| IrregLong | Analysis of Longitudinal Data with Irregular Observation Times |
| irrICC | Intraclass Correlations for Quantifying Inter-Rater Reliability |
| irrNA | Coefficients of Interrater Reliability - Generalized for Randomly Incomplete Datasets |
| IRSF | Interaction Random Survival Forest |
| irt | Item Response Theory and Computerized Adaptive Testing Functions |
| IRTBEMM | Family of Bayesian EMM Algorithm for Item Response Models |
| irtDemo | Item Response Theory Demo Collection |
| irtoys | A Collection of Functions Related to Item Response Theory (IRT) |
| irtplay | Unidimensional Item Response Theory Modeling |
| irtProb | Utilities and Probability Distributions Related to Multidimensional Person Item Response Models |
| irtrees | Estimation of Tree-Based Item Response Models |
| irtreliability | Item Response Theory Reliability |
| IRTShiny | Item Response Theory via Shiny |
| isa2 | The Iterative Signature Algorithm |
| ISAT | Extract Cell Density and Nearest Distance Based on 'PerkinElmer InForm' Software Output |
| ISBF | Iterative Selection of Blocks of Features - ISBF |
| ISCO08ConveRsions | Converts ISCO-08 to Job Prestige Scores, ISCO-88 and Job Name |
| isdals | Provides datasets for Introduction to Statistical Data Analysis for the Life Sciences |
| iSDM | Invasive Species Distribution Modelling |
| isdparser | Parse 'NOAA' Integrated Surface Data Files |
| ISEtools | Tools for Ion Selective Electrodes |
| IsingFit | Fitting Ising Models Using the ELasso Method |
| isingLenzMC | Monte Carlo for Classical Ising Model |
| IsingSampler | Sampling Methods and Distribution Functions for the Ising Model |
| islasso | The Induced Smoothed Lasso |
| ISLR | Data for an Introduction to Statistical Learning with Applications in R |
| ISM | Interpretive Structural Modelling (ISM) |
| ismev | An Introduction to Statistical Modeling of Extreme Values |
| isni | Index of Local Sensitivity to Nonignorability |
| isnullptr | Check if an 'externalptr' is a Null Pointer |
| Iso | Functions to Perform Isotonic Regression |
| isoband | Generate Isolines and Isobands from Regularly Spaced Elevation Grids |
| isoboost | Isotonic Boosting Classification Rules |
| isocat | Isotope Origin Clustering and Assignment Tools |
| IsoCheck | Isomorphism Check for Multi-Stage Factorial Designs with Randomization Restrictions |
| IsoCI | Confidence intervals for current status data based on transformations and bootstrap |
| isocir | Isotonic Inference for Circular Data |
| ISOcodes | Selected ISO Codes |
| IsoCorr | Correcting Drift and Carry-over in Continuous Isotopic Measurements |
| IsoGene | Order-Restricted Inference for Microarray Experiments |
| isopam | Isopam (Clustering) |
| isopat | Calculation of isotopic pattern for a given molecular formula |
| IsoplotR | Statistical Toolbox for Radiometric Geochronology |
| IsoplotRgui | Web Interface to 'IsoplotR' |
| ISOpureR | Deconvolution of Tumour Profiles |
| isoreader | Read Stable Isotope Data Files |
| IsoriX | Isoscape Computation and Inference of Spatial Origins using Mixed Models |
| IsoSpecR | The IsoSpec Algorithm |
| isoSurv | Isotonic Regression on Survival Analysis |
| isotone | Active Set and Generalized PAVA for Isotone Optimization |
| isotonic.pen | Penalized Isotonic Regression in one and two dimensions |
| IsotopeR | Stable Isotope Mixing Model |
| isotree | Isolation-Based Outlier Detection |
| ISOweek | Week of the year and weekday according to ISO 8601 |
| ispd | Incomplete Split-Plot Designs |
| isqg | In Silico Quantitative Genetics |
| ISR3 | Iterative Sequential Regression |
| ISRaD | Tools and Data for the International Soil Radiocarbon Database |
| istacr | Obtaining Open Data from Instituto Canario De Estadistica (ISTAC) API |
| iSTATS | A Graphical Interface to Perform STOCSY Analyses on NMR Data |
| isva | Independent Surrogate Variable Analysis |
| ISwR | Introductory Statistics with R |
| italy | The Italian Survey on Household and Wealth, 2008 and 2010 |
| itan | Item Analysis for Multiple Choice Tests |
| itcSegment | Individual Tree Crowns Segmentation |
| itemanalysis | Classical Test Theory Item Analysis |
| iteRates | Parametric rate comparison |
| iterators | Provides Iterator Construct |
| iterLap | Approximate Probability Densities by Iterated Laplace Approximations |
| iterpc | Efficient Iterator for Permutations and Combinations |
| itertools | Iterator Tools |
| itertools2 | itertools2: Functions creating iterators for efficient looping |
| ITGM | Individual Tree Growth Modeling |
| ITNr | Analysis of the International Trade Network |
| iTOP | Inferring the Topology of Omics Data |
| ITRLearn | Statistical Learning for Individualized Treatment Regime |
| ITRSelect | Variable Selection for Optimal Individualized Dynamic Treatment Regime |
| its.analysis | Running Interrupted Time Series Analysis |
| itsadug | Interpreting Time Series and Autocorrelated Data Using GAMMs |
| itsmr | Time Series Analysis Using the Innovations Algorithm |
| IUPS | Incorporating Uncertainties in Propensity Scores |
| iva | Instrumental Variable Analysis in Case-Control Association Studies |
| ivdesc | Profiling Compliers and Non-Compliers for Instrumental Variable Analysis |
| ivdesign | Hypothesis Testing in Cluster-Randomized Encouragement Designs |
| ivdoctr | Ensures Mutually Consistent Beliefs When Using IVs |
| ivfixed | Instrumental fixed effect panel data model |
| ivitr | Estimate IV-Optimal Individualized Treatment Rules |
| ivmodel | Statistical Inference and Sensitivity Analysis for Instrumental Variables Model |
| ivmte | Instrumental Variables: Extrapolation by Marginal Treatment Effects |
| ivpack | Instrumental Variable Estimation |
| ivpanel | Instrumental Panel Data Models |
| ivprobit | Instrumental Variables Probit Model |
| ivreg | Two-Stage Least-Squares Regression with Diagnostics |
| ivregEX | Create Independent Evidence in IV Analyses and Do Sensitivity Analysis in Regression and IV Analysis |
| ivsacim | Structural Additive Cumulative Intensity Models with IV |
| ivtools | Instrumental Variables |
| ivx | Robust Econometric Inference |
| IVYplot | Produces an IVY Plot (Similar to Dot Plot) with/without Frequencies |
| iWeigReg | Improved methods for causal inference and missing data problems |
| iWISA | Wavelet-Based Index of Storm Activity |
| iZID | Identify Zero-Inflated Distributions |
| jaatha | Simulation-Based Maximum Likelihood Parameter Estimation |
| jabr | Easy Access for West Java Data |
| jaccard | Test Similarity Between Binary Data using Jaccard/Tanimoto Coefficients |
| jack | Jack, Zonal, and Schur Polynomials |
| jackalope | A Swift, Versatile Phylogenomic and High-Throughput Sequencing Simulator |
| jackknifeKME | Jackknife Estimates of Kaplan-Meier Estimators or Integrals |
| jackstrap | Correcting Nonparametric Frontier Measurements for Outliers |
| jackstraw | Statistical Inference for Unsupervised Learning |
| JacobiEigen | Classical Jacobi Eigenvalue Algorithm |
| jacpop | Jaccard Index for Population Structure Identification |
| JADE | Blind Source Separation Methods Based on Joint Diagonalization and Some BSS Performance Criteria |
| jaggR | Supporting Files and Functions for the Book Bayesian Modelling with 'JAGS' |
| jagsUI | A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses |
| JamendoR | Access to 'Jamendo' API |
| james.analysis | Analysis Tools for the 'JAMES' Framework |
| janeaustenr | Jane Austen's Complete Novels |
| janitor | Simple Tools for Examining and Cleaning Dirty Data |
| jaod | Directory of Open Access Journals Client |
| jarbes | Just a Rather Bayesian Evidence Synthesis |
| JASPAR | R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices |
| JavaGD | Java Graphics Device |
| Jaya | Jaya, a Gradient-Free Optimization Algorithm |
| JBrowseR | An R Interface to the JBrowse 2 Genome Browser |
| jcext | Extended Classification of Weather Types |
| jcolors | Colors Palettes for R and 'ggplot2', Additional Themes for 'ggplot2' |
| jcp | Joint Change Point Detection |
| Jdmbs | Monte Carlo Option Pricing Algorithms for Jump Diffusion Models with Correlational Companies |
| jdx | 'Java' Data Exchange for 'R' and 'rJava' |
| jeek | A Fast and Scalable Joint Estimator for Integrating Additional Knowledge in Learning Multiple Related Sparse Gaussian Graphical Models |
| jetpack | A Friendly Package Manager |
| jetset | One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays |
| jfa | Bayesian and Classical Audit Sampling |
| JFE | Tools and GUI for Analyzing Time Series Data of Just Finance and Econometrics |
| JGEE | Joint Generalized Estimating Equation Solver |
| JGL | Performs the Joint Graphical Lasso for Sparse Inverse Covariance Estimation on Multiple Classes |
| JGR | Java GUI for R |
| jiebaR | Chinese Text Segmentation |
| jiebaRD | Chinese Text Segmentation Data for jiebaR Package |
| jipApprox | Approximate Inclusion Probabilities for Survey Sampling |
| jjb | Balamuta Miscellaneous |
| jlctree | Joint Latent Class Trees for Joint Modeling of Time-to-Event and Longitudinal Data |
| jlsm | Joint Latent Space Model for Social Networks with Multivariate Attributes |
| JM | Joint Modeling of Longitudinal and Survival Data |
| JMbayes | Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach |
| JMbayes2 | Extended Joint Models for Longitudinal and Time-to-Event Data |
| jmcm | Joint Mean-Covariance Models using 'Armadillo' and S4 |
| JMcmprsk | Joint Models for Longitudinal and Competing Risks Data |
| jmdem | Fitting Joint Mean and Dispersion Effects Models |
| JMdesign | Joint Modeling of Longitudinal and Survival Data - Power Calculation |
| jmetrik | Tools for Interacting with 'jMetrik' |
| JMI | Jackknife Mutual Information |
| Jmisc | Julian Miscellaneous Function |
| jmotif | Time Series Analysis Toolkit Based on Symbolic Aggregate Discretization, i.e. SAX |
| jmuOutlier | Permutation Tests for Nonparametric Statistics |
| jmv | The 'jamovi' Analyses |
| jmvconnect | Connect to the 'jamovi' Statistical Spreadsheet |
| jmvcore | Dependencies for the 'jamovi' Framework |
| jmvReadWrite | Read and Write 'jamovi' Files ('.omv') |
| jocre | Joint Confidence Regions |
| JoF | Modelling and Simulating Judgments of Frequency |
| Johnson | Johnson Transformation |
| joineR | Joint Modelling of Repeated Measurements and Time-to-Event Data |
| joineRmeta | Joint Modelling for Meta-Analytic (Multi-Study) Data |
| joineRML | Joint Modelling of Multivariate Longitudinal Data and Time-to-Event Outcomes |
| joinet | Multivariate Elastic Net Regression |
| joint.Cox | Joint Frailty-Copula Models for Tumour Progression and Death in Meta-Analysis |
| JointAI | Joint Analysis and Imputation of Incomplete Data |
| jointDiag | Joint Approximate Diagonalization of a Set of Square Matrices |
| jointMeanCov | Joint Mean and Covariance Estimation for Matrix-Variate Data |
| JointModel | Semiparametric Joint Models for Longitudinal and Counting Processes |
| JointNets | End-to-End Sparse Gaussian Graphical Model Simulation, Estimation, Visualization, Evaluation and Application |
| jointNmix | Joint N-Mixture Models for Site-Associated Species |
| jointPm | Risk estimation using the joint probability method |
| jointseg | Joint Segmentation of Multivariate (Copy Number) Signals |
| joinXL | Perform Joins or Minus Queries on 'Excel' Files |
| jomo | Multilevel Joint Modelling Multiple Imputation |
| JOPS | Practical Smoothing with P-Splines |
| JoSAE | Unit-Level and Area-Level Small Area Estimation |
| josaplay | Add Josa Based on Previous Letter in Korean |
| jose | JavaScript Object Signing and Encryption |
| journalabbr | Journal Abbreviations for BibTeX Documents |
| JOUSBoost | Implements Under/Oversampling for Probability Estimation |
| jpeg | Read and write JPEG images |
| JPEN | Covariance and Inverse Covariance Matrix Estimation Using Joint Penalty |
| jpmesh | Utilities for Japanese Mesh Code |
| JQL | Jump Q-Learning for Individualized Interval-Valued Dose Rule |
| jqr | Client for 'jq', a 'JSON' Processor |
| jquerylib | Obtain 'jQuery' as an HTML Dependency Object |
| jrc | Exchange Commands Between R and 'JavaScript' |
| JRF | Joint Random Forest (JRF) for the Simultaneous Estimation of Multiple Related Networks |
| jrich | Jack-Knife Support for Evolutionary Distinctiveness Indices I and W |
| jrt | Item Response Theory Modeling and Scoring for Judgment Data |
| jrvFinance | Basic Finance; NPV/IRR/Annuities/Bond-Pricing; Black Scholes |
| js | Tools for Working with JavaScript in R |
| JSconsole | A 'RStudio' Addin to Send 'JavaScript' Code to the 'V8' Console |
| jSDM | Joint Species Distribution Models |
| jskm | Kaplan-Meier Plot with 'ggplot2' |
| JSM | Semiparametric Joint Modeling of Survival and Longitudinal Data |
| JSmediation | Mediation Analysis Using Joint Significance |
| jsmodule | 'RStudio' Addins and 'Shiny' Modules for Medical Research |
| json64 | A 'Base64' Encode/Decode Package with Support for JSON Output/Input and UTF-8 |
| jSonarR | jSonar Analytics Platform API for R |
| jsonify | Convert Between 'R' Objects and Javascript Object Notation (JSON) |
| jsonld | JSON for Linking Data |
| jsonlite | A Simple and Robust JSON Parser and Generator for R |
| jsonstat | Interface to 'JSON-stat' |
| jsonvalidate | Validate 'JSON' |
| jsr223 | A 'Java' Platform Integration for 'R' with Programming Languages 'Groovy', 'JavaScript', 'JRuby' ('Ruby'), 'Jython' ('Python'), and 'Kotlin' |
| jstable | Create Tables from Different Types of Regression |
| jstor | Read Data from JSTOR/DfR |
| jsTree | Create Interactive Trees with the 'jQuery' 'jsTree' Plugin |
| jsTreeR | A Wrapper of the JavaScript Library 'jsTree' |
| jti | Junction Tree Inference |
| jtools | Analysis and Presentation of Social Scientific Data |
| jtrans | Johnson Transformation for Normality |
| jubilee | Forecasting Long-Term Growth of the U.S. Stock Market and Business Cycles |
| Julia | Fractal Image Data Generator |
| JuliaCall | Seamless Integration Between R and 'Julia' |
| JuliaConnectoR | A Functionally Oriented Interface for Integrating 'Julia' with R |
| JumpeR | Importing and Working with Track and Field Data |
| JumpTest | Financial Jump Detection |
| junctions | The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages |
| jvcoords | Principal Component Analysis (PCA) and Whitening |
| jvnVaR | Value at Risk |
| JWileymisc | Miscellaneous Utilities and Functions |
| kableExtra | Construct Complex Table with 'kable' and Pipe Syntax |
| kader | Kernel Adaptive Density Estimation and Regression |
| kamila | Methods for Clustering Mixed-Type Data |
| kangar00 | Kernel Approaches for Nonlinear Genetic Association Regression |
| KANT | Package to identify and sort genes overexpressed |
| kantorovich | Kantorovich Distance Between Probability Measures |
| kaos | Encoding of Sequences Based on Frequency Matrix Chaos Game Representation |
| kaphom | Test the Homogeneity of Kappa Statistics |
| KappaGUI | An R-Shiny Application for Calculating Cohen's and Fleiss' Kappa |
| kappalab | Non-Additive Measure and Integral Manipulation Functions |
| kappaSize | Sample Size Estimation Functions for Studies of Interobserver Agreement |
| KappaV | Calculates "vectorial Kappa", an index of congruence between patchy mosaics |
| kaps | K-Adaptive Partitioning for Survival data |
| karaoke | Remove Vocals from a Song |
| KarsTS | An Interface for Microclimate Time Series Analysis |
| kayadata | Kaya Identity Data for Nations and Regions |
| kazaam | Tools for Tall Distributed Matrices |
| KbMvtSkew | Khattree-Bahuguna's Univariate and Multivariate Skewness |
| kcirt | k-Cube Thurstonian IRT Models |
| kcopula | The Bivariate K-Copula |
| kcpRS | Kernel Change Point Detection on the Running Statistics |
| KCSKNNShiny | K-Nearest Neighbour Classifier |
| KCSNBShiny | Naive Bayes Classifier |
| kde1d | Univariate Kernel Density Estimation |
| kdecopula | Kernel Smoothing for Bivariate Copula Densities |
| kdensity | Kernel Density Estimation with Parametric Starts and Asymmetric Kernels |
| kdetrees | Nonparametric method for identifying discordant phylogenetic trees |
| kdevine | Multivariate Kernel Density Estimation with Vine Copulas |
| kdist | K-Distribution and Weibull Paper |
| KDViz | Knowledge Domain Visualization |
| kedd | Kernel Estimator and Bandwidth Selection for Density and Its Derivatives |
| keep | Arrays with Better Control over Dimension Dropping |
| kehra | Collect, Assemble and Model Air Pollution, Weather and Health Data |
| kelvin | Calculate Solutions to the Kelvin Differential Equation using Bessel Functions |
| Kendall | Kendall rank correlation and Mann-Kendall trend test |
| kendallRandomWalks | Simulate and Visualize Kendall Random Walks and Related Distributions |
| KENDL | Kernel-Smoothed Nonparametric Methods for Environmental Exposure Data Subject to Detection Limits |
| KenSyn | Knowledge Synthesis in Agriculture - From Experimental Network to Meta-Analysis |
| kequate | The Kernel Method of Test Equating |
| keras | R Interface to 'Keras' |
| kerasR | R Interface to the Keras Deep Learning Library |
| kerastuneR | Interface to 'Keras Tuner' |
| kerdiest | Nonparametric kernel estimation of the distribution function. Bandwidth selection and estimation of related functions |
| KERE | Expectile Regression in Reproducing Kernel Hilbert Space |
| kergp | Gaussian Process Laboratory |
| kerndwd | Distance Weighted Discrimination (DWD) and Kernel Methods |
| kernelboot | Smoothed Bootstrap and Random Generation from Kernel Densities |
| kernelFactory | Kernel Factory: An Ensemble of Kernel Machines |
| Kernelheaping | Kernel Density Estimation for Heaped and Rounded Data |
| KernelKnn | Kernel k Nearest Neighbors |
| kernelPSI | Post-Selection Inference for Nonlinear Variable Selection |
| kernhaz | Kernel Estimation of Hazard Function in Survival Analysis |
| kernlab | Kernel-Based Machine Learning Lab |
| kernplus | A Kernel Regression-Based Multidimensional Wind Turbine Power Curve |
| kernscr | Kernel Machine Score Test for Semi-Competing Risks |
| KernSmooth | Functions for Kernel Smoothing Supporting Wand & Jones (1995) |
| KernSmoothIRT | Nonparametric Item Response Theory |
| kerTests | Generalized Kernel Two-Sample Tests |
| keyATM | Keyword Assisted Topic Model |
| Keyboard | Bayesian Designs for Early Phase Clinical Trials |
| KeyboardSimulator | Keyboard and Mouse Input Simulation for Windows OS |
| keyholder | Store Data About Rows |
| keyplayer | Locating Key Players in Social Networks |
| keypress | Wait for a Key Press in a Terminal |
| keyring | Access the System Credential Store from R |
| keyringr | Decrypt Passwords from Gnome Keyring, Windows Data Protection API and macOS Keychain |
| keys | Keyboard Shortcuts for 'shiny' |
| keyToEnglish | Convert Data to Memorable Phrases |
| KFAS | Kalman Filter and Smoother for Exponential Family State Space Models |
| kfda | Kernel Fisher Discriminant Analysis |
| kfigr | Integrated Code Chunk Anchoring and Referencing for R Markdown Documents |
| KFKSDS | Kalman Filter, Smoother and Disturbance Smoother |
| KFPCA | Kendall Functional Principal Component Analysis |
| kgc | Koeppen-Geiger Climatic Zones |
| KGode | Kernel Based Gradient Matching for Parameter Inference in Ordinary Differential Equations |
| kgrams | Classical k-gram Language Models |
| kgschart | KGS Rank Graph Parser |
| khroma | Colour Schemes for Scientific Data Visualization |
| kibior | A Simple Data Management and Sharing Tool |
| kidney.epi | Kidney Functions: Clinical and Epidemiological |
| kim | Functions for Behavioral Science Researchers |
| kimisc | Kirill's Miscellaneous Functions |
| kin.cohort | Analysis of Kin-Cohort Studies |
| kineticF | Framework for the Analysis of Kinetic Visual Field Data |
| kinship2 | Pedigree Functions |
| kirby21.base | Example Data from the Multi-Modal MRI 'Reproducibility' Resource |
| kirby21.fmri | Example Functional Imaging Data from the Multi-Modal MRI 'Reproducibility' Resource |
| kirby21.t1 | Example T1 Structural Data from the Multi-Modal MRI 'Reproducibility' Resource |
| kissmig | a Keep It Simple Species Migration Model |
| kit | Data Manipulation Functions Implemented in C |
| kitagawa | Spectral Response of Water Wells to Harmonic Strain and Pressure Signals |
| kittyR | Kitty Pictures and Meows from R Console |
| kiwisR | A Wrapper for Querying KISTERS 'WISKI' Databases via the 'KiWIS' API |
| kknn | Weighted k-Nearest Neighbors |
| klaR | Classification and Visualization |
| klausuR | Multiple Choice Test Evaluation |
| klexdatr | Kootenay Lake Exploitation Study Data |
| klic | Kernel Learning Integrative Clustering |
| klsh | Blocking for Record Linkage |
| klustR | D3 Dynamic Cluster Visualizations |
| km.ci | Confidence intervals for the Kaplan-Meier estimator |
| kmc | Kaplan-Meier Estimator with Constraints for Right Censored Data – a Recursive Computational Algorithm |
| kmcudaR | 'Yingyang' K-Means and K-NN using NVIDIA CUDA |
| KMDA | Kernel-Based Metabolite Differential Analysis |
| kmed | Distance-Based k-Medoids |
| kmer | Fast K-Mer Counting and Clustering for Biological Sequence Analysis |
| kmi | Kaplan-Meier Multiple Imputation for the Analysis of Cumulative Incidence Functions in the Competing Risks Setting |
| kml | K-Means for Longitudinal Data |
| kml3d | K-Means for Joint Longitudinal Data |
| kmlShape | K-Means for Longitudinal Data using Shape-Respecting Distance |
| kmodR | K-Means with Simultaneous Outlier Detection |
| KMsurv | Data sets from Klein and Moeschberger (1997), Survival Analysis |
| KMunicate | KMunicate-Style Kaplan–Meier Plots |
| KnapsackSampling | Generate Feasible Samples of a Knapsack Problem |
| KneeArrower | Finds Cutoff Points on Knee Curves |
| knitcitations | Citations for 'Knitr' Markdown Files |
| knitLatex | 'Knitr' Helpers - Mostly Tables |
| knitr | A General-Purpose Package for Dynamic Report Generation in R |
| knitrBootstrap | 'knitr' Bootstrap Framework |
| knitrdata | Data Language Engine for 'knitr' / 'rmarkdown' |
| knitrProgressBar | Provides Progress Bars in 'knitr' |
| knn.covertree | An Accurate kNN Implementation with Multiple Distance Measures |
| knnIndep | Independence tests and benchmarks |
| knnp | Time Series Prediction using K-Nearest Neighbors Algorithm (Parallel) |
| KNNShiny | Interactive Document for Working with KNN Analysis |
| knockoff | The Knockoff Filter for Controlled Variable Selection |
| KnockoffScreen | Whole-Genome Sequencing Data Analysis via Knockoff Statistics |
| Knoema | Interface to the Knoema API |
| knor | Non-Uniform Memory Access ('NUMA') Optimized, Parallel K-Means |
| knotR | Knot Diagrams using Bezier Curves |
| KnowBR | Discriminating Well Surveyed Spatial Units from Exhaustive Biodiversity Databases |
| KnowGRRF | Knowledge-Based Guided Regularized Random Forest |
| kntnr | R Client for 'kintone' API |
| KOBT | Knockoff Boosted Tree |
| kofdata | Get Data from the 'KOF Datenservice' API |
| kofnGA | A Genetic Algorithm for Fixed-Size Subset Selection |
| KOGMWU | Functional Summary and Meta-Analysis of Gene Expression Data |
| kohonen | Supervised and Unsupervised Self-Organising Maps |
| kokudosuuchi | Utilities for 'Kokudo Suuchi' |
| kolmim | An Improved Evaluation of Kolmogorov's Distribution |
| komaletter | Simply Beautiful PDF Letters from Markdown |
| KONPsurv | KONP Tests: Powerful K-Sample Tests for Right-Censored Data |
| koRpus | Text Analysis with Emphasis on POS Tagging, Readability, and Lexical Diversity |
| koRpus.lang.en | Language Support for 'koRpus' Package: English |
| kosel | Variable Selection by Revisited Knockoffs Procedures |
| KoulMde | Koul's Minimum Distance Estimation in Regression and Image Segmentation Problems |
| Kpart | Cubic Spline Fitting with Knot Selection |
| KPC | Kernel Partial Correlation Coefficient |
| kpcalg | Kernel PC Algorithm for Causal Structure Detection |
| kpeaks | Determination of K Using Peak Counts of Features for Clustering |
| kpmt | Known Population Median Test |
| kpodclustr | Method for Clustering Partially Observed Data |
| KraljicMatrix | A Quantified Implementation of the Kraljic Matrix |
| kriens | Continuation Passing Style Development |
| krige | Geospatial Kriging with Metropolis Sampling |
| kriging | Ordinary Kriging |
| KrigInv | Kriging-Based Inversion for Deterministic and Noisy Computer Experiments |
| krippendorffsalpha | Measuring Agreement Using Krippendorff's Alpha Coefficient |
| KRIS | Keen and Reliable Interface Subroutines for Bioinformatic Analysis |
| KRLS | Kernel-Based Regularized Least Squares |
| krm | Kernel Based Regression Models |
| KRMM | Kernel Ridge Mixed Model |
| ks | Kernel Smoothing |
| kSamples | K-Sample Rank Tests and their Combinations |
| KScorrect | Lilliefors-Corrected Kolmogorov-Smirnov Goodness-of-Fit Tests |
| KSD | Goodness-of-Fit Tests using Kernelized Stein Discrepancy |
| KSEAapp | Kinase-Substrate Enrichment Analysis |
| kselection | Selection of K in K-Means Clustering |
| KSgeneral | Computing P-Values of the K-S Test for (Dis)Continuous Null Distribution |
| ksharp | Cluster Sharpening |
| ksNN | K* Nearest Neighbors Algorithm |
| KSPM | Kernel Semi-Parametric Models |
| ksrlive | Identify Kinase Substrate Relationships Using Dynamic Data |
| kst | Knowledge Space Theory |
| kStatistics | Unbiased Estimators for Cumulant Products |
| kstIO | Knowledge Space Theory Input/Output |
| kstMatrix | Basic Functions in Knowledge Space Theory Using Matrix Representation |
| ktaucenters | Robust Clustering Procedures |
| KTensorGraphs | Co-Tucker3 Analysis of Two Sequences of Matrices |
| ktsolve | Configurable Function for Solving Families of Nonlinear Equations |
| kubik | Cubic Hermite Splines and Related Optimization Methods |
| kuiper.2samp | Two-Sample Kuiper Test |
| kulife | Datasets and functions from the (now non-existing) Faculty of Life Sciences, University of Copenhagen |
| kutils | Project Management Tools |
| kvh | Read/Write Files in Key-Value-Hierarchy Format |
| kwb.hantush | Calculation of Groundwater Mounding Beneath an Infiltration Basin |
| kyotil | Utility Functions for Statistical Analysis Report Generation and Monte Carlo Studies |
| kza | Kolmogorov-Zurbenko Adaptive Filters |
| kzfs | Multi-Scale Motions Separation with Kolmogorov-Zurbenko Periodogram Signals |
| kzft | Kolmogorov-Zurbenko Fourier Transform and Applications |
| kzs | Kolmogorov-Zurbenko Spatial Smoothing and Applications |
| l0ara | Sparse Generalized Linear Model with L0 Approximation for Feature Selection |
| L0Learn | Fast Algorithms for Best Subset Selection |
| l1ball | L1-Ball Prior for Sparse Regression |
| l1kdeconv | Deconvolution for LINCS L1000 Data |
| L1mstate | L1-Regularized Multi-State Models |
| L1pack | Routines for L1 Estimation |
| l2boost | Friedman's Boosting Algorithm for Regularized Linear Regression |
| L2DensityGoFtest | Density Goodness-of-Fit Test |
| labdsv | Ordination and Multivariate Analysis for Ecology |
| label.switching | Relabelling MCMC Outputs of Mixture Models |
| labeledLoop | Labeled Loop |
| labeling | Axis Labeling |
| labelled | Manipulating Labelled Data |
| labelmachine | Make Labeling of R Data Sets Easy |
| labelrank | Predicting Rankings of Labels |
| labelVector | Label Attributes for Atomic Vectors |
| LabourMarketAreas | Identification, Tuning, Visualisation and Analysis of Labour Market Areas |
| labourR | Classify Multilingual Labour Market Free-Text to Standardized Hierarchical Occupations |
| LabRS | Laboratorio di "Ricerca Sociale con R" |
| labsimplex | Simplex Optimization Algorithms for Laboratory and Manufacturing Processes |
| labstatR | Libreria Del Laboratorio Di Statistica Con R |
| labstats | Data S |