CKMRpop: Forward-in-Time Simulation and Tallying of Pairwise Relationships

Provides an R wrapper around the program 'spip' (<https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1471-8286.2005.00884.x>), a C program for the simulation of pedigrees within age-structured populations with user-specified life histories. Also includes a variety of functions to parse 'spip' output to compile information about related pairs amongst simulated, sampled individuals, to assess the feasibility and potential accuracy of close-kin mark-recapture (CKMR). Full documentation and vignettes are mirrored at <https://eriqande.github.io/CKMRpop/index.html> and can be read online there.

Version: 0.1.3
Depends: R (≥ 3.5.0)
Imports: dplyr, ggforce, ggplot2, ggraph, igraph, magrittr, purrr, Rcpp (≥ 1.0.4), readr, stats, stringr, tibble, tidygraph, tidyr, vroom
LinkingTo: Rcpp
Suggests: knitr, rmarkdown, tidyverse
Published: 2021-07-17
Author: Eric C. Anderson ORCID iD [aut, cre]
Maintainer: Eric C. Anderson <eric.anderson at noaa.gov>
License: CC0
NeedsCompilation: yes
Materials: README NEWS
CRAN checks: CKMRpop results

Documentation:

Reference manual: CKMRpop.pdf
Vignettes: About spip
simple-example-with-migration
species_1_simulation

Downloads:

Package source: CKMRpop_0.1.3.tar.gz
Windows binaries: r-devel: CKMRpop_0.1.3.zip, r-devel-UCRT: CKMRpop_0.1.3.zip, r-release: CKMRpop_0.1.3.zip, r-oldrel: CKMRpop_0.1.3.zip
macOS binaries: r-release (arm64): CKMRpop_0.1.3.tgz, r-release (x86_64): CKMRpop_0.1.3.tgz, r-oldrel: CKMRpop_0.1.3.tgz
Old sources: CKMRpop archive

Linking:

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