dataquieR 2.0.0
dq_report2
replaces dq_report
. Please use
dq_report2
from now on.
- Full new reporting engine (needs
htmtools
and supports
plotly
)
- Better report layout and improved functionality
- Support for reading and referring to data in files/URLs
- Support for the integrity dimension in data quality report
- Included distribution and multivariate outlier (provide cross-item
level metadata for the latter) plots in data quality report
- Metadata scheme update (segment,
data.frame
, and
cross-item levels). No required action by user, previous version still
supported
REDCap
rules for contradictions (cross-item level
metadata), previous contradictions function still supported
- Support metadata describing segment data and study data tables
(segment and
data.frame
-level metadata)
- New item-level metadata version (backwards compatible)
- Support for computation of qualified missingness based on labels
from the
AAPOR
concept
acc_univariate_outlier
and
acc_multivariate_outlier
now allow selecting the methods
used to flag outliers
- Included distributional checks in the accuracy dimension for
location and proportion
- Rotation of plots can now be controlled
- Improved many figures
- Better control over warnings
- If
whoami
is installed, reports now show a more
suitable user name
- Many minor improvements
- Updated citations
dataquieR 1.0.13
- fixed a left-over
~
from the ggplot2
updates causing acc_margins
to fail for categorical
variables
dataquieR 1.0.12
dataquieR 1.0.12
- Addressed a problem with the markdown template underlying the
dq_report
reports with wrong brackets
- Addressed deprecations from
ggplot2 3.4.0
- Added
ORCIDs
for two authors
- Updated the
CITATION
file
- Updated the
README.md
file adding the funding
sources.
dataquieR 1.0.11
- Addressed a problem with some test platforms
- Added funding agencies in the manual
dataquieR 1.0.10
- Fixed
NEWS.md
file
- Fixed documentation
dataquieR 1.0.9
- Fixed bug in
sigmagap
and made missing guessing more
robust.
- Fixed checks on missing code detection failing for
logical
.
- Fixed a damaged check for numeric threshold values in
acc_margins
.
- Fixed wrongly named
GRADING
columns.
- Improved parallel execution by automatic detection of cores.
- Tidy html dependency
dataquieR 1.0.8
- Removed formal arguments from
rbind.ReportSummaryTable
since these are not needed anyways and the inherited documentation for
those arguments rbind
from base
contains an
invalid URL triggering a NOTE
.
dataquieR 1.0.7
- Fixed bugs in example metadata.
- Figures now have size hints as attributes.
- Added simple type conversion check indicator function of dimension
integrity,
int_datatype_matrix
.
- Corrected some error classifications
prep_study2meta
can now also convert factors to
dataquieR
compatible
meta_data
/study_data
- Slightly improved documentation.
- Bug fix in
com_item_missingness
for textual response
variables.
- Added new output slot with heat-map like tables. Implemented some
generics for those.
dataquieR 1.0.6
- Robustness: Ensure
DT JS
is always loaded when a
dq_report report is rendered
- Bug fix: More robust handling of DECIMALS variable attribute, if
this is delivered as a character.
- Bug Fix:
com_segment_missingness
with
strata_vars
/ group_vars
did not work
- Bug Fix: If
label_col
was set to something else than
LABEL
, strata_vars
did not work for
com_unit_missingness
- More precise documentation.
- Fixed a bug in a utility function for the univariate outliers
indicator function, which caused many data points flagged as outliers by
the sigma- gap criterion.
- Made outlier function aware of too many non-outlier points causing
too complex graphics (e.g. pdf rendering crashes the PDF reader).
- Fixes and small improvements in
dq_report
.
- Switched from
cowplot
to patchwork
in
acc_margins
yielding figures that can be easier
manipulated. Please note, that this change could break existing output
manipulations, since the structure of the margins plots has changed
internally. However, output manipulations were hardly possible for
margins plots before, so it is unlikely, that there are pipelines
affected.
- More control about the output of the
acc_loess
function.
- More robust
prep_create_meta
handling length-0
arguments by ignoring these variable attributes at all.
- Added a classification system for warnings and error messages to
distinguish errors based on mismatching variables for a function from
other error messages.
- https://github.com/openjournals/joss-reviews/issues/3093#issuecomment-840695360
- Some tidy up and more tests.
dataquieR 1.0.5
- Fixed two bugs in
con_inadmissible_categorical
(one
resp_var
only and value-limits all the same for all
resp_vars
)
- Changed LICENSE to BSD-2
- Slightly updated documentation
- Updated
README
-File
dataquieR 1.0.4
- Fixed CITATION, a broken reference in Rd and a problem with the
vignette on
pandoc
-less systems
- Improved an inaccurate argument description for multivariate
outliers
- Fixed a problem with error messages, if a
dataquieR
function was called by a generated function f
that lives in
an environment directly inheriting from the empty environment, e.g.
environment(f) <- new.env(parent = emptyenv())
.
- Marked some examples as
dontrun
, because they sometimes
caused NOTE
s on rhub
.
dataquieR 1.0.3
- Addressed all comments by the CRAN reviewers, thank you.
dataquieR 1.0.2
- Bug Fix: If an empty data frame was delivered in the
SummaryTable
entry of a result within a
dq_report
output, the summary
and also
print
generic did not work on the report.
dataquieR 1.0.1
- Skipping some of the slower tests on CRAN now. On my local system, a
full
devtools::check(cran = TRUE, env_vars = c(NOT_CRAN = "false"))
takes 2:22 minutes now.
dataquieR 1.0.0
- Initial CRAN release candidate