nparACT: Non-Parametric Measures of Actigraphy Data

Computes interdaily stability (IS), intradaily variability (IV) & the relative amplitude (RA) from actigraphy data as described in Blume et al. (2016) <doi:10.1016/j.mex.2016.05.006> and van Someren et al. (1999) <doi:10.3109/07420529908998724>. Additionally, it also computes L5 (i.e. the 5 hours with lowest average actigraphy amplitude) and M10 (the 10 hours with highest average amplitude) as well as the respective start times. The flex versions will also compute the L-value for a user-defined number of minutes. IS describes the strength of coupling of a rhythm to supposedly stable zeitgebers. It varies between 0 (Gaussian Noise) and 1 for perfect IS. IV describes the fragmentation of a rhythm, i.e. the frequency and extent of transitions between rest and activity. It is near 0 for a perfect sine wave, about 2 for Gaussian noise and may be even higher when a definite ultradian period of about 2 hrs is present. RA is the relative amplitude of a rhythm. Note that to obtain reliable results, actigraphy data should cover a reasonable number of days.

Version: 0.8
Imports: ggplot2, grid, stringr, zoo, tools
Published: 2017-12-20
DOI: 10.32614/CRAN.package.nparACT
Author: Christine Blume Nayantara Santhi Manuel Schabus
Maintainer: Christine Blume <christine.blume at>
License: GPL-2
NeedsCompilation: no
In views: Tracking
CRAN checks: nparACT results


Reference manual: nparACT.pdf


Package source: nparACT_0.8.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): nparACT_0.8.tgz, r-oldrel (arm64): nparACT_0.8.tgz, r-release (x86_64): nparACT_0.8.tgz, r-oldrel (x86_64): nparACT_0.8.tgz
Old sources: nparACT archive


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