poolVIM: Gene-Based Association Tests using the Actual Impurity Reduction (AIR) Variable Importance

Gene-based association tests using the actual impurity reduction (AIR) variable importance. The function aggregates AIR importance measures from a group of SNPs or probes and outputs a p-value for each gene. The procedures builds upon the method described in <doi:10.1093/Bioinformatics/Bty373> and will be published soon.

Version: 1.0.0
Depends: R (≥ 3.3.1), EmpiricalBrownsMethod (≥ 1.6.0), Hmisc (≥ 4.1)
Imports: stats, ranger
Published: 2018-07-30
DOI: 10.32614/CRAN.package.poolVIM
Author: Stefano Nembrini
Maintainer: Stefano Nembrini <stefanonembrini at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: poolVIM results


Reference manual: poolVIM.pdf


Package source: poolVIM_1.0.0.tar.gz
Windows binaries: r-devel: poolVIM_1.0.0.zip, r-release: poolVIM_1.0.0.zip, r-oldrel: poolVIM_1.0.0.zip
macOS binaries: r-release (arm64): poolVIM_1.0.0.tgz, r-oldrel (arm64): poolVIM_1.0.0.tgz, r-release (x86_64): poolVIM_1.0.0.tgz, r-oldrel (x86_64): poolVIM_1.0.0.tgz


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