tcgaViz: Visualization Tool for the Cancer Genome Atlas Program (TCGA)

Differential analysis of tumor tissue immune cell type abundance based on RNA-seq gene-level expression from The Cancer Genome Atlas (TCGA; <>) database.

Version: 1.0.2
Depends: R (≥ 2.10)
Imports: config, data.table, dplyr, DT, ggplot2, ggpubr, golem, grDevices, magrittr, methods, plotly, readr, reshape2, rlang, rstatix, scales, shiny, shinyFeedback, shinyjs, stats, stringr, tidyr, tidyselect, utils
Suggests: covr, knitr, rmarkdown, spelling, testthat
Published: 2023-04-04
DOI: 10.32614/CRAN.package.tcgaViz
Author: Etienne Camenen [aut, cre], Gilles Marodon [aut], Nicolas Aubert [aut]
Maintainer: Etienne Camenen <etienne.camenen at>
License: GPL-3
NeedsCompilation: no
Language: en-US
Materials: README
CRAN checks: tcgaViz results


Reference manual: tcgaViz.pdf
Vignettes: Tutorial


Package source: tcgaViz_1.0.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): tcgaViz_1.0.2.tgz, r-oldrel (arm64): tcgaViz_1.0.2.tgz, r-release (x86_64): tcgaViz_1.0.2.tgz, r-oldrel (x86_64): tcgaViz_1.0.2.tgz
Old sources: tcgaViz archive


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